RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 OGFRQ9NZT2 677 aa14.77□□□□□ -0.05
RNF40-209ENST00000566703 ZNF624Q9P2J8 865 aaPredicted RBP14.77□□□□□ -0.05
RNF40-209ENST00000566703 INTUQ9ULD6 942 aa14.77□□□□□ -0.05
RNF40-209ENST00000566703 ATMQ13315 3056 aa14.77□□□□□ -0.05
RNF40-209ENST00000566703 A0A0A6YYK5 440 aaPredicted RBP14.76□□□□□ -0.05
RNF40-209ENST00000566703 LOC285095A0A1B0GVY8 99 aa14.76□□□□□ -0.05
RNF40-209ENST00000566703 PYCARD-AS1I3L0S3 204 aa14.76□□□□□ -0.05
RNF40-209ENST00000566703 NKX2-8O15522 239 aa14.76□□□□□ -0.05
RNF40-209ENST00000566703 MTSS1O43312 755 aa14.76□□□□□ -0.05
RNF40-209ENST00000566703 DLGAP3O95886 979 aa14.76□□□□□ -0.05
RNF40-209ENST00000566703 TPM1P09493 284 aa14.76□□□□□ -0.05
RNF40-209ENST00000566703 PIRTP0C851 137 aa14.76□□□□□ -0.05
RNF40-209ENST00000566703 VCLP18206 1134 aa14.76□□□□□ -0.05
RNF40-209ENST00000566703 PTMSP20962 102 aa14.76□□□□□ -0.05
RNF40-209ENST00000566703 IDSP22304 550 aa14.76□□□□□ -0.05
RNF40-209ENST00000566703 HMGCLP35914 325 aa14.76□□□□□ -0.05
RNF40-209ENST00000566703 NFKB2Q00653 900 aa14.76□□□□□ -0.05
RNF40-209ENST00000566703 TFDP2Q14188 446 aa14.76□□□□□ -0.05
RNF40-209ENST00000566703 IL11RAQ14626 422 aa14.76□□□□□ -0.05
RNF40-209ENST00000566703 PCSK7Q16549 785 aa14.76□□□□□ -0.05
RNF40-209ENST00000566703 ZNF648Q5T619 568 aaPredicted RBP14.76□□□□□ -0.05
RNF40-209ENST00000566703 RFX6Q8HWS3 928 aa14.76□□□□□ -0.05
RNF40-209ENST00000566703 RNF25Q96BH1 459 aaPredicted RBP14.76□□□□□ -0.05
RNF40-209ENST00000566703 CHP1Q99653 195 aa14.76□□□□□ -0.05
RNF40-209ENST00000566703 CEP41Q9BYV8 373 aa14.76□□□□□ -0.05
RNF40-209ENST00000566703 RAB33BQ9H082 229 aa14.76□□□□□ -0.05
RNF40-209ENST00000566703 ARFGAP3Q9NP61 516 aa14.76□□□□□ -0.05
RNF40-209ENST00000566703 SCHIP1Q9P0W5 487 aaPredicted RBP14.76□□□□□ -0.05
RNF40-209ENST00000566703 EPHA6Q9UF33 1036 aa14.76□□□□□ -0.05
RNF40-209ENST00000566703 KLHL3Q9UH77 587 aa14.76□□□□□ -0.05
RNF40-209ENST00000566703 PDZK1P1A8MUH7 402 aa14.75□□□□□ -0.05
RNF40-209ENST00000566703 MT-CYBP00156 380 aaPredicted RBP14.75□□□□□ -0.05
RNF40-209ENST00000566703 KRT1P04264 644 aa14.75□□□□□ -0.05
RNF40-209ENST00000566703 PTPN3P26045 913 aa14.75□□□□□ -0.05
RNF40-209ENST00000566703 TMEM115Q12893 351 aaPredicted RBP14.75□□□□□ -0.05
RNF40-209ENST00000566703 PRKD1Q15139 912 aaPredicted RBP14.75□□□□□ -0.05
RNF40-209ENST00000566703 TAZQ16635 292 aa14.75□□□□□ -0.05
RNF40-209ENST00000566703 CRTC3Q6UUV7 619 aa14.75□□□□□ -0.05
RNF40-209ENST00000566703 NPNTQ6UXI9 565 aa14.75□□□□□ -0.05
RNF40-209ENST00000566703 ZNF547Q8IVP9 402 aa14.75□□□□□ -0.05
RNF40-209ENST00000566703 SPATA22Q8NHS9 363 aa14.75□□□□□ -0.05
RNF40-209ENST00000566703 TFB1MQ8WVM0 346 aaKnown RBP14.75□□□□□ -0.05
RNF40-209ENST00000566703 ZDHHC12Q96GR4 267 aa14.75□□□□□ -0.05
RNF40-209ENST00000566703 ZNF768Q9H5H4 540 aaKnown RBP14.75□□□□□ -0.05
RNF40-209ENST00000566703 NHEJ1Q9H9Q4 299 aaPredicted RBP14.75□□□□□ -0.05
RNF40-209ENST00000566703 SLC40A1Q9NP59 571 aa14.75□□□□□ -0.05
RNF40-209ENST00000566703 ABHD10Q9NUJ1 306 aa14.75□□□□□ -0.05
RNF40-209ENST00000566703 HACD3Q9P035 362 aa14.75□□□□□ -0.05
RNF40-209ENST00000566703 FAM153AQ9UHL3 310 aa14.75□□□□□ -0.05
RNF40-209ENST00000566703 DNMT3AQ9Y6K1 912 aaPredicted RBP14.75□□□□□ -0.05
RNF40-209ENST00000566703 SLC30A1Q9Y6M5 507 aa14.75□□□□□ -0.05
RNF40-209ENST00000566703 ZFC3H1O60293 1989 aaKnown RBP14.74□□□□□ -0.05
RNF40-209ENST00000566703 CFAP46Q8IYW2 2715 aa14.74□□□□□ -0.05
RNF40-209ENST00000566703 ARHGAP6O43182 974 aa14.74□□□□□ -0.05
RNF40-209ENST00000566703 RECKO95980 971 aa14.74□□□□□ -0.05
RNF40-209ENST00000566703 BRAFP15056 766 aa14.74□□□□□ -0.05
RNF40-209ENST00000566703 TYRP1P17643 537 aa14.74□□□□□ -0.05
RNF40-209ENST00000566703 STAT5AP42229 794 aa14.74□□□□□ -0.05
RNF40-209ENST00000566703 GFERP55789 205 aa14.74□□□□□ -0.05
RNF40-209ENST00000566703 CDC20Q12834 499 aa14.74□□□□□ -0.05
RNF40-209ENST00000566703 GTF2H3Q13889 308 aa14.74□□□□□ -0.05
RNF40-209ENST00000566703 CYB5D1Q6P9G0 228 aa14.74□□□□□ -0.05
RNF40-209ENST00000566703 MFSD7Q6UXD7 560 aa14.74□□□□□ -0.05
RNF40-209ENST00000566703 PRSS42Q7Z5A4 293 aa14.74□□□□□ -0.05
RNF40-209ENST00000566703 APOBEC4Q8WW27 367 aaKnown RBP14.74□□□□□ -0.05
RNF40-209ENST00000566703 KLHL6Q8WZ60 621 aa14.74□□□□□ -0.05
RNF40-209ENST00000566703 TTC25Q96NG3 672 aa14.74□□□□□ -0.05
RNF40-209ENST00000566703 VAT1Q99536 393 aa14.74□□□□□ -0.05
RNF40-209ENST00000566703 TRIM4Q9C037 500 aa14.74□□□□□ -0.05
RNF40-209ENST00000566703 SEMA5BQ9P283 1151 aa14.74□□□□□ -0.05
RNF40-209ENST00000566703 ANAPC2Q9UJX6 822 aa14.74□□□□□ -0.05
RNF40-209ENST00000566703 TMPRSS11EQ9UL52 423 aa14.74□□□□□ -0.05
RNF40-209ENST00000566703 DNAJC16Q9Y2G8 782 aa14.74□□□□□ -0.05
RNF40-209ENST00000566703 RPS6KL1Q9Y6S9 549 aa14.74□□□□□ -0.05
RNF40-209ENST00000566703 GOLGA6L3A6NEY3 463 aa14.73□□□□□ -0.05
RNF40-209ENST00000566703 AURKAO14965 403 aa14.73□□□□□ -0.05
RNF40-209ENST00000566703 MTX2O75431 263 aa14.73□□□□□ -0.05
RNF40-209ENST00000566703 PMPCBO75439 489 aa14.73□□□□□ -0.05
RNF40-209ENST00000566703 TCN2P20062 427 aa14.73□□□□□ -0.05
RNF40-209ENST00000566703 COMTP21964 271 aa14.73□□□□□ -0.05
RNF40-209ENST00000566703 CDKN2BP42772 138 aa14.73□□□□□ -0.05
RNF40-209ENST00000566703 TNNT3P45378 269 aaPredicted RBP14.73□□□□□ -0.05
RNF40-209ENST00000566703 HADHBP55084 474 aaKnown RBP14.73□□□□□ -0.05
RNF40-209ENST00000566703 WNT3AP56704 352 aa14.73□□□□□ -0.05
RNF40-209ENST00000566703 FOXM1Q08050 763 aa14.73□□□□□ -0.05
RNF40-209ENST00000566703 DMPKQ09013 629 aa14.73□□□□□ -0.05
RNF40-209ENST00000566703 WASHC5Q12768 1159 aa14.73□□□□□ -0.05
RNF40-209ENST00000566703 ATP13A5Q4VNC0 1218 aa14.73□□□□□ -0.05
RNF40-209ENST00000566703 KHDC1Q4VXA5 237 aaKnown RBP14.73□□□□□ -0.05
RNF40-209ENST00000566703 KDELC1Q6UW63 502 aa14.73□□□□□ -0.05
RNF40-209ENST00000566703 C6orf15Q6UXA7 325 aaPredicted RBP14.73□□□□□ -0.05
RNF40-209ENST00000566703 C11orf96Q7Z7L8 435 aa14.73□□□□□ -0.05
RNF40-209ENST00000566703 UNC5BQ8IZJ1 945 aa14.73□□□□□ -0.05
RNF40-209ENST00000566703 STARD8Q92502 1023 aa14.73□□□□□ -0.05
RNF40-209ENST00000566703 COL26A1Q96A83 441 aa14.73□□□□□ -0.05
RNF40-209ENST00000566703 CXorf40BQ96DE9 158 aa14.73□□□□□ -0.05
RNF40-209ENST00000566703 TGM7Q96PF1 710 aa14.73□□□□□ -0.05
RNF40-209ENST00000566703 FCRL4Q96PJ5 515 aa14.73□□□□□ -0.05
RNF40-209ENST00000566703 FCRL5Q96RD9 977 aa14.73□□□□□ -0.05
RNF40-209ENST00000566703 ULBP3Q9BZM4 244 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms