RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 ZDHHC5Q9C0B5 715 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 OR2AG1Q9H205 316 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 PLAC1Q9HBJ0 212 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 PPANQ9NQ55 473 aaKnown RBP11.35□□□□□ -0.59
KARS-207ENST00000566560 SEMA4GQ9NTN9 838 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 DNAJC28Q9NX36 388 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 ZDHHC3Q9NYG2 299 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 VPS18Q9P253 973 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 MARCH4Q9P2E8 410 aaPredicted RBP11.35□□□□□ -0.59
KARS-207ENST00000566560 MOSPD1Q9UJG1 213 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 SLC17A4Q9Y2C5 497 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 TMEM98Q9Y2Y6 226 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.35□□□□□ -0.59
KARS-207ENST00000566560 FAM169AQ9Y6X4 670 aa11.35□□□□□ -0.59
KARS-207ENST00000566560 ZFC3H1O60293 1989 aaKnown RBP11.35□□□□□ -0.59
KARS-207ENST00000566560 RIF1Q5UIP0 2472 aaKnown RBP11.35□□□□□ -0.59
KARS-207ENST00000566560 GVINP1Q7Z2Y8 2422 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 CABIN1Q9Y6J0 2220 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 LNP1A1A4G5 178 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 H3BM21 787 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 CD3EAPO15446 510 aaKnown RBP11.34□□□□□ -0.59
KARS-207ENST00000566560 VEGFDO43915 354 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 RASGRP1O95267 797 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 ZNF806P0C7X5 589 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 MYBL2P10244 700 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 RALBP11234 206 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 NME1P15531 152 aaKnown RBP11.34□□□□□ -0.59
KARS-207ENST00000566560 ENGP17813 658 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 MSH3P20585 1137 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 PMLP29590 882 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 PPARGP37231 505 aaPredicted RBP11.34□□□□□ -0.59
KARS-207ENST00000566560 SLC1A2P43004 574 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 ATXN3P54252 364 aaPredicted RBP11.34□□□□□ -0.59
KARS-207ENST00000566560 SRP54P61011 504 aaKnown RBP11.34□□□□□ -0.59
KARS-207ENST00000566560 VSNL1P62760 191 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 IRX4P78413 519 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 PPARDQ03181 441 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 EIF2B5Q13144 721 aaKnown RBP11.34□□□□□ -0.59
KARS-207ENST00000566560 ITIH4Q14624 930 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 SF3A2Q15428 464 aaKnown RBP11.34□□□□□ -0.59
KARS-207ENST00000566560 TYSND1Q2T9J0 566 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 ZNF542PQ5EBM4 170 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 RNF187Q5TA31 235 aaPredicted RBP11.34□□□□□ -0.59
KARS-207ENST00000566560 LYPLAL1Q5VWZ2 237 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 KCTD16Q68DU8 428 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 NEPROQ6NW34 567 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 TRMT10BQ6PF06 316 aaKnown RBP11.34□□□□□ -0.59
KARS-207ENST00000566560 CRTC3Q6UUV7 619 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 CERS6Q6ZMG9 384 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 MARK2Q7KZI7 788 aaKnown RBP11.34□□□□□ -0.59
KARS-207ENST00000566560 ADGRG6Q86SQ4 1221 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 LDB1Q86U70 411 aaPredicted RBP11.34□□□□□ -0.59
KARS-207ENST00000566560 GALNT13Q8IUC8 556 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 HID1Q8IV36 788 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 PALM2Q8IXS6 379 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 PHACTR4Q8IZ21 702 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 UNC5BQ8IZJ1 945 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 EIF1ADQ8N9N8 165 aaKnown RBP11.34□□□□□ -0.59
KARS-207ENST00000566560 ARMC2Q8NEN0 867 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 GABPB2Q8TAK5 448 aaPredicted RBP11.34□□□□□ -0.59
KARS-207ENST00000566560 CALML6Q8TD86 181 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 HEXDCQ8WVB3 486 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 OR1E3Q8WZA6 343 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 CCDC97Q96F63 343 aaPredicted RBP11.34□□□□□ -0.59
KARS-207ENST00000566560 DCUN1D1Q96GG9 259 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 TTC25Q96NG3 672 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 GTPBP2Q9BX10 602 aaKnown RBP11.34□□□□□ -0.59
KARS-207ENST00000566560 CDC42EP4Q9H3Q1 356 aaKnown RBP11.34□□□□□ -0.59
KARS-207ENST00000566560 VPS37BQ9H9H4 285 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 CARS2Q9HA77 564 aaKnown RBP11.34□□□□□ -0.59
KARS-207ENST00000566560 TRIM39Q9HCM9 518 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 CYP4F12Q9HCS2 524 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 PARD6AQ9NPB6 346 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 MRPL40Q9NQ50 206 aaKnown RBP11.34□□□□□ -0.59
KARS-207ENST00000566560 ATXN10Q9UBB4 475 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 APOBEC3BQ9UH17 382 aaKnown RBP11.34□□□□□ -0.59
KARS-207ENST00000566560 SUFUQ9UMX1 484 aa11.34□□□□□ -0.59
KARS-207ENST00000566560 VPS13AQ96RL7 3174 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 MYO15AQ9UKN7 3530 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 GPR89AB7ZAQ6 455 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 TNFRSF10CO14798 259 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 SCAMP1O15126 338 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 SPAG6O75602 509 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 CEACAM5P06731 702 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 IVLP07476 585 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 GSTA2P09210 222 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 GPR89BP0CG08 455 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 ERVK-10P10266 1014 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 ZNF8P17098 575 aaPredicted RBP11.33□□□□□ -0.6
KARS-207ENST00000566560 MCM3P25205 808 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 SSTR1P30872 391 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 GNPDA1P46926 289 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 POLD2P49005 469 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 ARRB1P49407 418 aaPredicted RBP11.33□□□□□ -0.6
KARS-207ENST00000566560 TTPAP49638 278 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 CCT8P50990 548 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 BLKP51451 505 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 HK3P52790 923 aa11.33□□□□□ -0.6
KARS-207ENST00000566560 FRG1Q14331 258 aaKnown RBP11.33□□□□□ -0.6
KARS-207ENST00000566560 SLMAPQ14BN4 828 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms