RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 DDX3YO15523 660 aaKnown RBP13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 UGT2B11O75310 529 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 STK16O75716 305 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 PRNPP04156 253 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 CYP4F8P98187 520 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 IL17AQ16552 155 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 TMEM63BQ5T3F8 832 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 GCNT6Q5T4J0 391 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 SLC24A5Q71RS6 500 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 GALNTL5Q7Z4T8 443 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 UNC5BQ8IZJ1 945 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 FAM81AQ8TBF8 368 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 FBXW2Q9UKT8 454 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 RHPN2P1A8MT19 583 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 LOC110117498-PIK3R3F6TDL0 507 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 MFSD11O43934 449 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 ICAM3P32942 547 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 DUSP28Q4G0W2 176 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 PTPN20Q4JDL3 420 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 C15orf52Q6ZUT6 534 aaKnown RBP13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 PIK3C3Q8NEB9 887 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 HSD17B14Q9BPX1 270 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 RTKNQ9BST9 563 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 MRIQ9BWK5 157 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 PHF24Q9UPV7 400 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 IPO13O94829 963 aaKnown RBP13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 CLDN9O95484 217 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 ANXA4P09525 319 aaPredicted RBP13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 RGS8P57771 180 aaPredicted RBP13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 RTP1P59025 263 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 SIM2Q14190 667 aaPredicted RBP13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 TBC1D21Q8IYX1 336 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 GSTCDQ8NEC7 633 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 UPF1Q92900 1129 aaKnown RBP eCLIP13.51□□□□□ -0.252e-14■■■■■ 76.7
CX3CL1-204ENST00000565912 LHX5Q9H2C1 402 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 IPPKQ9H8X2 491 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 FAM155BO75949 473 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 RAB2AP61019 212 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 DSC2Q02487 901 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 MSANTD2Q6P1R3 559 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 CHST4Q8NCG5 386 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 SRFBP1Q8NEF9 429 aaKnown RBP13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 ZCCHC10Q8TBK6 192 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 WDR60Q8WVS4 1066 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 NXNL1Q96CM4 212 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 PTPN18Q99952 460 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 TAPBPLQ9BX59 468 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 PADI3Q9ULW8 664 aa13.51□□□□□ -0.25
CX3CL1-204ENST00000565912 NDST3O95803 873 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 HOXC12P31275 282 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 DNASE1L1P49184 302 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 DRG2P55039 364 aaKnown RBP13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 ILF3Q12906 894 aaKnown RBP eCLIP13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 IL18Q14116 193 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 NOMO1Q15155 1222 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 FBXO48Q5FWF7 155 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 XYLT1Q86Y38 959 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 SNX33Q8WV41 574 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 FAM83DQ9H4H8 585 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 CHRAC1Q9NRG0 131 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 DUS2Q9NX74 493 aaKnown RBP13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 ZFP37Q9Y6Q3 630 aaPredicted RBP13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 UBR1Q8IWV7 1749 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 PER2O15055 1255 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 OR1F1O43749 312 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 RGS20O76081 388 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 NUDT17P0C025 328 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 DRD4P21917 467 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 ASMTP46597 345 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 ENPEPQ07075 957 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 RASSF6Q6ZTQ3 369 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 PRSS58Q8IYP2 241 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 CRYBG2Q8N1P7 616 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 DCBLD1Q8N8Z6 715 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 OR52J3Q8NH60 311 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 HAVCR1Q96D42 359 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 CPXM1Q96SM3 734 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 GPR20Q99678 358 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 RIC1Q4ADV7 1423 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 CPSF4LA6NMK7 179 aaKnown RBP13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 RPIAP49247 311 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 HSDL1Q3SXM5 330 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 SLC30A6Q6NXT4 461 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 OR5T3Q8NGG3 340 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 TWIST2Q8WVJ9 160 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 A0A0X1KG70 313 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 TRAFD1O14545 582 aaPredicted RBP13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 PRAMEF1O95521 474 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 HSPA7P48741 367 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 MAPK12P53778 367 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 PLEKHG4Q58EX7 1191 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 FRRS1Q6ZNA5 592 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 TRABD2AQ86V40 505 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 FAM47BQ8NA70 645 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 LCN9Q8WX39 176 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 RELTQ969Z4 430 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 MIOSQ9NXC5 875 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 ERVW-1Q9UQF0 538 aa13.5□□□□□ -0.25
CX3CL1-204ENST00000565912 COL1A2P08123 1366 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms