RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.32□□□□□ -1.4
TCF4-228ENST00000565393 SCHIP1Q9P0W5 487 aaPredicted RBP6.32□□□□□ -1.4
TCF4-228ENST00000565393 ZNF624Q9P2J8 865 aaPredicted RBP6.32□□□□□ -1.4
TCF4-228ENST00000565393 PDP2Q9P2J9 529 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 RSPH14Q9UHP6 348 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 TRHDEQ9UKU6 1024 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 TFR2Q9UP52 801 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 PCDHGA4Q9Y5G9 962 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 CACNA1GO43497 2377 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 NYNRINQ9P2P1 1898 aaKnown RBP6.32□□□□□ -1.4
TCF4-228ENST00000565393 TRPM6Q9BX84 2022 aa6.32□□□□□ -1.4
TCF4-228ENST00000565393 DOCK4Q8N1I0 1966 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 hCG_1818297A0A087WSY0 165 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 GLYATL1P3A0A0U1RQE8 302 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 MACROD2A1Z1Q3 448 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 A6NCN8 305 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 OR2AG2A6NM03 316 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 OR52A4PA6NMU1 304 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 C2orf81A6NN90 581 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 HACD1B0YJ81 288 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.31□□□□□ -1.4
TCF4-228ENST00000565393 PYCARD-AS1I3L0S3 204 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 STX7O15400 261 aaKnown RBP6.31□□□□□ -1.4
TCF4-228ENST00000565393 CAPN5O15484 640 aaPredicted RBP6.31□□□□□ -1.4
TCF4-228ENST00000565393 KCNJ13O60928 360 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 ANXA9O76027 345 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 STK17BO94768 372 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 STK10O94804 968 aaKnown RBP6.31□□□□□ -1.4
TCF4-228ENST00000565393 IPO7O95373 1038 aaKnown RBP6.31□□□□□ -1.4
TCF4-228ENST00000565393 LIFP15018 202 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 WT1P19544 449 aaPredicted RBP6.31□□□□□ -1.4
TCF4-228ENST00000565393 MSH3P20585 1137 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 RBL1P28749 1068 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 HMGCLP35914 325 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 SPAM1P38567 509 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 SLC19A1P41440 591 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 CHRNA4P43681 627 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 CCR10P46092 362 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 LEPRP48357 1165 aaKnown RBP6.31□□□□□ -1.4
TCF4-228ENST00000565393 ARL4DP49703 201 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 SEPHS1P49903 392 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 ARSDP51689 593 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 DCDC1P59894 354 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 KCNC4Q03721 635 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 MPP3Q13368 585 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 KRT33BQ14525 404 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 GSE1Q14687 1217 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 PTPRCAPQ14761 206 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 SLC1A5Q15758 541 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 FNBP1LQ5T0N5 605 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 CACHD1Q5VU97 1274 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 IRGCQ6NXR0 463 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 TMEM220Q6QAJ8 160 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 KDELC1Q6UW63 502 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 FAM151BQ6UXP7 276 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 FAM92BQ6ZTR7 304 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 TMEM26Q6ZUK4 368 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 DET1Q7L5Y6 550 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 GLT6D1Q7Z4J2 308 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 AMZ2Q86W34 360 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 RASGRP3Q8IV61 690 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 KATNAL2Q8IYT4 538 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 UNC5BQ8IZJ1 945 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 NLGN4XQ8N0W4 816 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 RASGEF1AQ8N9B8 481 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 TC2NQ8N9U0 490 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 NLGN4YQ8NFZ3 816 aaPredicted RBP6.31□□□□□ -1.4
TCF4-228ENST00000565393 ZNF398Q8TD17 642 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 RTP4Q96DX8 246 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 RNF31Q96EP0 1072 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 ZDHHC12Q96GR4 267 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 MRGPRX2Q96LB1 330 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 C9orf72Q96LT7 481 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 VPS35Q96QK1 796 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 APOL2Q9BQE5 337 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 ZPBPQ9BS86 351 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 TIMM29Q9BSF4 260 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 EFHD1Q9BUP0 239 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 SLC12A9Q9BXP2 914 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 EPB41L1Q9H4G0 881 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 GPN2Q9H9Y4 310 aaPredicted RBP6.31□□□□□ -1.4
TCF4-228ENST00000565393 APMAPQ9HDC9 416 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 SLC40A1Q9NP59 571 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 HACD3Q9P035 362 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 PILRAQ9UKJ1 303 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 PSMD13Q9UNM6 376 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 PCDHA3Q9Y5H8 950 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 ADGRG1Q9Y653 693 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 EPN1Q9Y6I3 576 aaPredicted RBP6.31□□□□□ -1.4
TCF4-228ENST00000565393 SLC30A1Q9Y6M5 507 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 ZFHX4Q86UP3 3567 aa6.31□□□□□ -1.4
TCF4-228ENST00000565393 URB1O60287 2271 aaKnown RBP6.3□□□□□ -1.4
TCF4-228ENST00000565393 LOC101059948A0A1B0GTJ6 334 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 LILRA5A6NI73 299 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 ZNF891A8MT65 544 aaPredicted RBP6.3□□□□□ -1.4
TCF4-228ENST00000565393 NKX2-8O15522 239 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 KCNN4O15554 427 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 KATNA1O75449 491 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 TJP3O95049 919 aa6.3□□□□□ -1.4
TCF4-228ENST00000565393 POLBP06746 335 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms