RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 ATXN7L1Q9ULK2 861 aaPredicted RBP12.13□□□□□ -0.47
SPG7-211ENST00000565370 R3HDM2Q9Y2K5 976 aaKnown RBP12.13□□□□□ -0.47
SPG7-211ENST00000565370 LOXL2Q9Y4K0 774 aa12.13□□□□□ -0.47
SPG7-211ENST00000565370 ST14Q9Y5Y6 855 aa12.13□□□□□ -0.47
SPG7-211ENST00000565370 ARL5AQ9Y689 179 aa12.13□□□□□ -0.47
SPG7-211ENST00000565370 GOLGA6L3A6NEY3 463 aa12.12□□□□□ -0.47
SPG7-211ENST00000565370 ERI2A8K979 691 aaKnown RBP12.12□□□□□ -0.47
SPG7-211ENST00000565370 E7EVH7 732 aa12.12□□□□□ -0.47
SPG7-211ENST00000565370 HGSO14964 777 aaPredicted RBP12.12□□□□□ -0.47
SPG7-211ENST00000565370 BUD23O43709 281 aaKnown RBP12.12□□□□□ -0.47
SPG7-211ENST00000565370 LIASO43766 372 aa12.12□□□□□ -0.47
SPG7-211ENST00000565370 TNFSF15O95150 251 aa12.12□□□□□ -0.47
SPG7-211ENST00000565370 RALBP11234 206 aa12.12□□□□□ -0.47
SPG7-211ENST00000565370 ZNF7P17097 686 aaPredicted RBP12.12□□□□□ -0.47
SPG7-211ENST00000565370 IDSP22304 550 aa12.12□□□□□ -0.47
SPG7-211ENST00000565370 STIP1P31948 543 aaKnown RBP12.12□□□□□ -0.47
SPG7-211ENST00000565370 HALP42357 657 aa12.12□□□□□ -0.47
SPG7-211ENST00000565370 LMAN1P49257 510 aa12.12□□□□□ -0.47
SPG7-211ENST00000565370 EPHA4P54764 986 aa12.12□□□□□ -0.47
SPG7-211ENST00000565370 GDF10P55107 478 aa12.12□□□□□ -0.47
SPG7-211ENST00000565370 OR1D5P58170 312 aa12.12□□□□□ -0.47
SPG7-211ENST00000565370 B4GALNT1Q00973 533 aa12.12□□□□□ -0.47
SPG7-211ENST00000565370 CCDC173Q0VFZ6 552 aa12.12□□□□□ -0.47
SPG7-211ENST00000565370 TMEM115Q12893 351 aaPredicted RBP12.12□□□□□ -0.47
SPG7-211ENST00000565370 TRA2AQ13595 282 aaKnown RBP eCLIP12.12□□□□□ -0.47
SPG7-211ENST00000565370 SEPT6Q14141 434 aa12.12□□□□□ -0.47
SPG7-211ENST00000565370 CHRNA6Q15825 494 aa12.12□□□□□ -0.47
SPG7-211ENST00000565370 COL28A1Q2UY09 1125 aa12.12□□□□□ -0.47
SPG7-211ENST00000565370 ZNF648Q5T619 568 aaPredicted RBP12.12□□□□□ -0.47
SPG7-211ENST00000565370 GPRC6AQ5T6X5 926 aa12.12□□□□□ -0.47
SPG7-211ENST00000565370 LINC00523Q86TU6 105 aa12.12□□□□□ -0.47
SPG7-211ENST00000565370 SLC13A5Q86YT5 568 aaPredicted RBP12.12□□□□□ -0.47
SPG7-211ENST00000565370 JAMLQ86YT9 394 aa12.12□□□□□ -0.47
SPG7-211ENST00000565370 SLITRK4Q8IW52 837 aa12.12□□□□□ -0.47
SPG7-211ENST00000565370 HNRNPLLQ8WVV9 542 aaKnown RBP12.12□□□□□ -0.47
SPG7-211ENST00000565370 KCNE4Q8WWG9 221 aa12.12□□□□□ -0.47
SPG7-211ENST00000565370 ATG4AQ8WYN0 398 aa12.12□□□□□ -0.47
SPG7-211ENST00000565370 ULK4Q96C45 1275 aa12.12□□□□□ -0.47
SPG7-211ENST00000565370 RTP4Q96DX8 246 aa12.12□□□□□ -0.47
SPG7-211ENST00000565370 ZNF514Q96K75 400 aaPredicted RBP12.12□□□□□ -0.47
SPG7-211ENST00000565370 C19orf43Q9BQ61 176 aa12.12□□□□□ -0.47
SPG7-211ENST00000565370 GRPEL1Q9HAV7 217 aa12.12□□□□□ -0.47
SPG7-211ENST00000565370 ASCL3Q9NQ33 180 aa12.12□□□□□ -0.47
SPG7-211ENST00000565370 POT1Q9NUX5 634 aa12.12□□□□□ -0.47
SPG7-211ENST00000565370 CRLS1Q9UJA2 301 aa12.12□□□□□ -0.47
SPG7-211ENST00000565370 ZNF148Q9UQR1 794 aa12.12□□□□□ -0.47
SPG7-211ENST00000565370 DNAJC16Q9Y2G8 782 aa12.12□□□□□ -0.47
SPG7-211ENST00000565370 PCYT1BQ9Y5K3 369 aaPredicted RBP12.12□□□□□ -0.47
SPG7-211ENST00000565370 URB1O60287 2271 aaKnown RBP12.11□□□□□ -0.47
SPG7-211ENST00000565370 IGHV1OR21-1A0A087WYE8 117 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 TCRBV7S2A1N4TA0A589 114 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 KLHL33A6NCF5 533 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 A6NCN8 305 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 LILRA5A6NI73 299 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 CFAP99D6REC4 459 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 KCNJ13O60928 360 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 SRP72O76094 671 aaKnown RBP12.11□□□□□ -0.47
SPG7-211ENST00000565370 AP2A1O95782 977 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 IFNB1P01574 187 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 MSH3P20585 1137 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 UGT1A5P35504 534 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 FDFT1P37268 417 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 ZNF140P52738 457 aaPredicted RBP12.11□□□□□ -0.47
SPG7-211ENST00000565370 UCNP55089 124 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 NFATC2Q13469 925 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 OLIG2Q13516 323 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 SEPT7Q16181 437 aaKnown RBP12.11□□□□□ -0.47
SPG7-211ENST00000565370 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.11□□□□□ -0.47
SPG7-211ENST00000565370 IYDQ6PHW0 289 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 C19orf48Q6RUI8 117 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 CLEC14AQ86T13 490 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 RBM12BQ8IXT5 1001 aaKnown RBP12.11□□□□□ -0.47
SPG7-211ENST00000565370 KLHDC8BQ8IXV7 354 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 OR4D9Q8NGE8 314 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 DCUN1D1Q96GG9 259 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 SLC46A1Q96NT5 459 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 NUDT22Q9BRQ3 303 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 ASB8Q9H765 288 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 RDH14Q9HBH5 336 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 ARNT2Q9HBZ2 717 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.11□□□□□ -0.47
SPG7-211ENST00000565370 PISDQ9UG56 409 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 FKBPLQ9UIM3 349 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 ZKSCAN5Q9Y2L8 839 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 PCDHGA7Q9Y5G6 932 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 SLC30A1Q9Y6M5 507 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 UNC13CQ8NB66 2214 aa12.11□□□□□ -0.47
SPG7-211ENST00000565370 LAMA5O15230 3695 aa12.1□□□□□ -0.47
SPG7-211ENST00000565370 TRBV23OR9-2A0A075B6M9 112 aa12.1□□□□□ -0.47
SPG7-211ENST00000565370 CDRT15L2A8MXV6 281 aa12.1□□□□□ -0.47
SPG7-211ENST00000565370 CASC3O15234 703 aaKnown RBP12.1□□□□□ -0.47
SPG7-211ENST00000565370 PPM1DO15297 605 aa12.1□□□□□ -0.47
SPG7-211ENST00000565370 GPR39O43194 453 aa12.1□□□□□ -0.47
SPG7-211ENST00000565370 B4GAT1O43505 415 aa12.1□□□□□ -0.47
SPG7-211ENST00000565370 METTL18O95568 372 aa12.1□□□□□ -0.47
SPG7-211ENST00000565370 EML2O95834 649 aa12.1□□□□□ -0.47
SPG7-211ENST00000565370 VIPP01282 170 aa12.1□□□□□ -0.47
SPG7-211ENST00000565370 MSNP26038 577 aaKnown RBP12.1□□□□□ -0.47
SPG7-211ENST00000565370 PBLDP30039 288 aaPredicted RBP12.1□□□□□ -0.47
SPG7-211ENST00000565370 MAPK9P45984 424 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms