RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 MLLT10P55197 1068 aa18.37■□□□□ 0.53
NME3-204ENST00000563498 GBE1Q04446 702 aa18.37■□□□□ 0.53
NME3-204ENST00000563498 ATP13A4Q4VNC1 1196 aa18.37■□□□□ 0.53
NME3-204ENST00000563498 ZNF648Q5T619 568 aaPredicted RBP18.37■□□□□ 0.53
NME3-204ENST00000563498 AGAP9Q5VTM2 703 aa18.37■□□□□ 0.53
NME3-204ENST00000563498 CRTC3Q6UUV7 619 aa18.37■□□□□ 0.53
NME3-204ENST00000563498 PPP1R3BQ86XI6 285 aa18.37■□□□□ 0.53
NME3-204ENST00000563498 SEC14L1Q92503 715 aa18.37■□□□□ 0.53
NME3-204ENST00000563498 SYN2Q92777 582 aaPredicted RBP18.37■□□□□ 0.53
NME3-204ENST00000563498 NAP1L5Q96NT1 182 aaPredicted RBP18.37■□□□□ 0.53
NME3-204ENST00000563498 MAGEE1Q9HCI5 957 aa18.37■□□□□ 0.53
NME3-204ENST00000563498 SLC40A1Q9NP59 571 aa18.37■□□□□ 0.53
NME3-204ENST00000563498 LNPEPQ9UIQ6 1025 aa18.37■□□□□ 0.53
NME3-204ENST00000563498 TLK1Q9UKI8 766 aa18.37■□□□□ 0.53
NME3-204ENST00000563498 TEX15Q9BXT5 2789 aa18.37■□□□□ 0.53
NME3-204ENST00000563498 SPENQ96T58 3664 aaKnown RBP18.37■□□□□ 0.53
NME3-204ENST00000563498 BLACEA4D250 179 aa18.36■□□□□ 0.53
NME3-204ENST00000563498 CDC14CA4D256 554 aa18.36■□□□□ 0.53
NME3-204ENST00000563498 PDZK1P1A8MUH7 402 aa18.36■□□□□ 0.53
NME3-204ENST00000563498 VEGFDO43915 354 aa18.36■□□□□ 0.53
NME3-204ENST00000563498 JCHAINP01591 159 aa18.36■□□□□ 0.53
NME3-204ENST00000563498 BRAFP15056 766 aa18.36■□□□□ 0.53
NME3-204ENST00000563498 NELFEP18615 380 aaKnown RBP18.36■□□□□ 0.53
NME3-204ENST00000563498 IFI35P80217 286 aaPredicted RBP18.36■□□□□ 0.53
NME3-204ENST00000563498 PPIDQ08752 370 aaKnown RBP18.36■□□□□ 0.53
NME3-204ENST00000563498 DNASE1L3Q13609 305 aa18.36■□□□□ 0.53
NME3-204ENST00000563498 GALNT3Q14435 633 aa18.36■□□□□ 0.53
NME3-204ENST00000563498 CACHD1Q5VU97 1274 aa18.36■□□□□ 0.53
NME3-204ENST00000563498 ALS2CLQ60I27 953 aa18.36■□□□□ 0.53
NME3-204ENST00000563498 TMC3Q7Z5M5 1100 aa18.36■□□□□ 0.53
NME3-204ENST00000563498 ZNF547Q8IVP9 402 aa18.36■□□□□ 0.53
NME3-204ENST00000563498 PQLC3Q8N755 202 aa18.36■□□□□ 0.53
NME3-204ENST00000563498 CNTD1Q8N815 330 aa18.36■□□□□ 0.53
NME3-204ENST00000563498 CCNYQ8ND76 341 aa18.36■□□□□ 0.53
NME3-204ENST00000563498 RSC1A1Q92681 617 aa18.36■□□□□ 0.53
NME3-204ENST00000563498 FCRL4Q96PJ5 515 aa18.36■□□□□ 0.53
NME3-204ENST00000563498 TRIB3Q96RU7 358 aa18.36■□□□□ 0.53
NME3-204ENST00000563498 TWSG1Q9GZX9 223 aa18.36■□□□□ 0.53
NME3-204ENST00000563498 LRRC4CQ9HCJ2 640 aa18.36■□□□□ 0.53
NME3-204ENST00000563498 LHX9Q9NQ69 397 aa18.36■□□□□ 0.53
NME3-204ENST00000563498 DTLQ9NZJ0 730 aa18.36■□□□□ 0.53
NME3-204ENST00000563498 SEMA5BQ9P283 1151 aa18.36■□□□□ 0.53
NME3-204ENST00000563498 PIPSLA2A3N6 862 aa18.35■□□□□ 0.53
NME3-204ENST00000563498 KCNK1O00180 336 aa18.35■□□□□ 0.53
NME3-204ENST00000563498 KIF1CO43896 1103 aaKnown RBP18.35■□□□□ 0.53
NME3-204ENST00000563498 KRT7P08729 469 aa18.35■□□□□ 0.53
NME3-204ENST00000563498 IDSP22304 550 aa18.35■□□□□ 0.53
NME3-204ENST00000563498 SLC10A2Q12908 348 aaPredicted RBP18.35■□□□□ 0.53
NME3-204ENST00000563498 GPR18Q14330 331 aa18.35■□□□□ 0.53
NME3-204ENST00000563498 NR1I3Q14994 352 aa18.35■□□□□ 0.53
NME3-204ENST00000563498 SEPT7Q16181 437 aaKnown RBP18.35■□□□□ 0.53
NME3-204ENST00000563498 PLA2G4EQ3MJ16 856 aa18.35■□□□□ 0.53
NME3-204ENST00000563498 ANO6Q4KMQ2 910 aa18.35■□□□□ 0.53
NME3-204ENST00000563498 C4orf17Q53FE4 359 aa18.35■□□□□ 0.53
NME3-204ENST00000563498 TMEM135Q86UB9 458 aa18.35■□□□□ 0.53
NME3-204ENST00000563498 LRRN4Q8WUT4 740 aa18.35■□□□□ 0.53
NME3-204ENST00000563498 ELMO2Q96JJ3 720 aa18.35■□□□□ 0.53
NME3-204ENST00000563498 ZNF830Q96NB3 372 aaPredicted RBP18.35■□□□□ 0.53
NME3-204ENST00000563498 GBP4Q96PP9 640 aa18.35■□□□□ 0.53
NME3-204ENST00000563498 XPO4Q9C0E2 1151 aaKnown RBP18.35■□□□□ 0.53
NME3-204ENST00000563498 BRD8Q9H0E9 1235 aa18.35■□□□□ 0.53
NME3-204ENST00000563498 PDE7BQ9NP56 450 aa18.35■□□□□ 0.53
NME3-204ENST00000563498 DNAJC16Q9Y2G8 782 aa18.35■□□□□ 0.53
NME3-204ENST00000563498 SPTAN1Q13813 2472 aaKnown RBP18.34■□□□□ 0.53
NME3-204ENST00000563498 A0A087X0T9 212 aa18.34■□□□□ 0.53
NME3-204ENST00000563498 A0A1W2PQJ5 194 aa18.34■□□□□ 0.53
NME3-204ENST00000563498 SERPING1P05155 500 aa18.34■□□□□ 0.53
NME3-204ENST00000563498 FAM228BP0C875 321 aa18.34■□□□□ 0.53
NME3-204ENST00000563498 VCLP18206 1134 aa18.34■□□□□ 0.53
NME3-204ENST00000563498 CASP14P31944 242 aa18.34■□□□□ 0.53
NME3-204ENST00000563498 GJC1P36383 396 aa18.34■□□□□ 0.53
NME3-204ENST00000563498 ZBTB17Q13105 803 aa18.34■□□□□ 0.53
NME3-204ENST00000563498 SEMA5AQ13591 1074 aa18.34■□□□□ 0.53
NME3-204ENST00000563498 FAM92BQ6ZTR7 304 aa18.34■□□□□ 0.53
NME3-204ENST00000563498 BPHLQ86WA6 291 aaPredicted RBP18.34■□□□□ 0.53
NME3-204ENST00000563498 GALNT11Q8NCW6 608 aa18.34■□□□□ 0.53
NME3-204ENST00000563498 CT55Q8WUE5 264 aa18.34■□□□□ 0.53
NME3-204ENST00000563498 UBXN4Q92575 508 aa18.34■□□□□ 0.53
NME3-204ENST00000563498 CXorf40BQ96DE9 158 aa18.34■□□□□ 0.53
NME3-204ENST00000563498 IMP4Q96G21 291 aaKnown RBP18.34■□□□□ 0.53
NME3-204ENST00000563498 VPS35Q96QK1 796 aa18.34■□□□□ 0.53
NME3-204ENST00000563498 SRPK1Q96SB4 655 aaKnown RBP18.34■□□□□ 0.53
NME3-204ENST00000563498 GPR87Q9BY21 358 aa18.34■□□□□ 0.53
NME3-204ENST00000563498 SHOC2Q9UQ13 582 aa18.34■□□□□ 0.53
NME3-204ENST00000563498 ZNF711Q9Y462 761 aa18.34■□□□□ 0.53
NME3-204ENST00000563498 UTP20O75691 2785 aaKnown RBP18.33■□□□□ 0.53
NME3-204ENST00000563498 OR52A4PA6NMU1 304 aa18.33■□□□□ 0.52
NME3-204ENST00000563498 KCNJ13O60928 360 aa18.33■□□□□ 0.52
NME3-204ENST00000563498 VPS4BO75351 444 aa18.33■□□□□ 0.52
NME3-204ENST00000563498 PROSCO94903 275 aa18.33■□□□□ 0.52
NME3-204ENST00000563498 CDK14O94921 469 aa18.33■□□□□ 0.52
NME3-204ENST00000563498 RPL10P27635 214 aaKnown RBP18.33■□□□□ 0.52
NME3-204ENST00000563498 SLC14A2Q15849 920 aa18.33■□□□□ 0.52
NME3-204ENST00000563498 IRGCQ6NXR0 463 aa18.33■□□□□ 0.52
NME3-204ENST00000563498 ALKBH5Q6P6C2 394 aaKnown RBP18.33■□□□□ 0.52
NME3-204ENST00000563498 C11orf96Q7Z7L8 435 aa18.33■□□□□ 0.52
NME3-204ENST00000563498 THAP4Q8WY91 577 aa18.33■□□□□ 0.52
NME3-204ENST00000563498 RNF31Q96EP0 1072 aa18.33■□□□□ 0.52
NME3-204ENST00000563498 SLC41A2Q96JW4 573 aa18.33■□□□□ 0.52
NME3-204ENST00000563498 GPR63Q9BZJ6 419 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms