RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 CLGNO14967 610 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 SPRY1O43609 319 aaPredicted RBP3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 PLPP2O43688 288 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 JRKO75564 520 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 RFPL2O75678 378 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 TGFB3P10600 412 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 SRCP12931 536 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 UBA1P22314 1058 aaKnown RBP3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 EEF1DP29692 281 aaKnown RBP3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 OAS2P29728 719 aaKnown RBP3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 SSTR2P30874 369 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 HOXA13P31271 388 aaPredicted RBP3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 TLX1P31314 330 aaPredicted RBP3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 PRKCIP41743 596 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 MSH2P43246 934 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 ZNF41P51814 821 aaPredicted RBP3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 RAD23AP54725 363 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 HNRNPH2P55795 449 aaKnown RBP3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 TAS2R40P59535 323 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 SEC61BP60468 96 aaKnown RBP3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 TFAP4Q01664 338 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 KIF5AQ12840 1032 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 SNTB1Q13884 538 aaKnown RBP3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 OASLQ15646 514 aaKnown RBP3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 PCGF3Q3KNV8 242 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 ATP13A5Q4VNC0 1218 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 XKR9Q5GH70 373 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 FRG2Q64ET8 278 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 TMEM211Q6ICI0 200 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 CAVIN1Q6NZI2 390 aaKnown RBP3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 KCTD18Q6PI47 426 aaPredicted RBP3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 TSPAN33Q86UF1 283 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 IQCA1Q86XH1 822 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 CHERPQ8IWX8 916 aaKnown RBP3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 THNSL1Q8IYQ7 743 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 DCP1BQ8IZD4 617 aaKnown RBP3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 DSELQ8IZU8 1212 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 OR8H3Q8N146 312 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 PGBD5Q8N414 524 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 FBXO39Q8N4B4 442 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 MINDY1Q8N5J2 469 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 TDRD5Q8NAT2 981 aaKnown RBP3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 SLC4A11Q8NBS3 891 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 ZNF114Q8NC26 417 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 HMGCLL1Q8TB92 370 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 NEUROG1Q92886 237 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 ZNF622Q969S3 477 aaKnown RBP eCLIP3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 ZNF653Q96CK0 615 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 LINC00615Q96LM1 132 aaPredicted RBP3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 CEP295NLQ96MC4 621 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 GBP5Q96PP8 586 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 FIZ1Q96SL8 496 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 DDOQ99489 341 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 MEIS3Q99687 375 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 VPS33BQ9H267 617 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 IL25Q9H293 177 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 OSGEPL1Q9H4B0 414 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 MAGIXQ9H6Y5 334 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 ZWILCHQ9H900 591 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 NOX4Q9NPH5 578 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 ACSS1Q9NUB1 689 aaPredicted RBP3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 TAS2R14Q9NYV8 317 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 CWC15Q9P013 229 aaKnown RBP3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 UBA2Q9UBT2 640 aaPredicted RBP3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 ACSL5Q9ULC5 683 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 PCDHGA5Q9Y5G8 931 aa3.22□□□□□ -1.89
SHCBP1-202ENST00000563219 LNP1A1A4G5 178 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 FAM170AA1A519 330 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 ARHGEF37A1IGU5 675 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 SRRM3A6NNA2 597 aaPredicted RBP3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 A8MXE2 369 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 SOCS6O14544 535 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 RSL1D1O76021 490 aaKnown RBP3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 EGFP01133 1207 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 ICAM1P05362 532 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 ATP5BP06576 529 aaKnown RBP3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 FDPSP14324 419 aaKnown RBP3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 AZGP1P25311 298 aaKnown RBP3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 CCR10P46092 362 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 PNLIPRP2P54317 469 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 CDH13P55290 713 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 DSCR9P59020 149 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 BRWD1-AS2P59051 145 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 TUBA1BP68363 451 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 MRPS34P82930 218 aaKnown RBP3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 RALGDSQ12967 914 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 GRIK2Q13002 908 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 MYBPHQ13203 477 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 SCARB2Q14108 478 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 KEAP1Q14145 624 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 CALCRLQ16602 461 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 PNLIPRP3Q17RR3 467 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 PAPPA-AS1Q5QFB9 102 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 KRT80Q6KB66 452 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 FAM122CQ6P4D5 195 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 DCLRE1AQ6PJP8 1040 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 SUSD1Q6UWL2 747 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 SLC36A4Q6YBV0 504 aa3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 RBM23Q86U06 439 aaKnown RBP3.21□□□□□ -1.9
SHCBP1-202ENST00000563219 CCDC190Q86UF4 302 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms