RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 A0A087X0M5 115 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 A0A1B0GX30 115 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 C1orf226A1L170 272 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 LIPT2A6NK58 231 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 EIF4E1BA6NMX2 242 aaKnown RBP3□□□□□ -1.93
HDGFL3-202ENST00000562702 F5H0A9 414 aaPredicted RBP3□□□□□ -1.93
HDGFL3-202ENST00000562702 SCAMP1O15126 338 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 KCNN4O15554 427 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 SCGB1D1O95968 90 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 CD4P01730 458 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 FAM106CPP0CH98 169 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 ARL3P36405 182 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 APOBEC1P41238 236 aaKnown RBP3□□□□□ -1.93
HDGFL3-202ENST00000562702 AMPHP49418 695 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 HOXA1P49639 335 aaPredicted RBP3□□□□□ -1.93
HDGFL3-202ENST00000562702 CLCN3P51790 818 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 TAS2R40P59535 323 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 PLIN5Q00G26 463 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 DDX10Q13206 875 aaKnown RBP3□□□□□ -1.93
HDGFL3-202ENST00000562702 PDE1CQ14123 709 aaPredicted RBP3□□□□□ -1.93
HDGFL3-202ENST00000562702 MED22Q15528 200 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 SOWAHCQ53LP3 525 aaPredicted RBP3□□□□□ -1.93
HDGFL3-202ENST00000562702 ZNF805Q5CZA5 627 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 C18orf63Q68DL7 685 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 TMEM154Q6P9G4 183 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 PAPD4Q6PIY7 484 aaKnown RBP3□□□□□ -1.93
HDGFL3-202ENST00000562702 C19orf48Q6RUI8 117 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 SARM1Q6SZW1 724 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 ASB18Q6ZVZ8 466 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 PXKQ7Z7A4 578 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 EPHX4Q8IUS5 362 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 KBTBD3Q8NAB2 608 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 ZNF248Q8NDW4 579 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 ACVR1CQ8NER5 493 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 DMBX1Q8NFW5 382 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 OR13A1Q8NGR1 328 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 OR1J2Q8NGS2 313 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 OR5R1Q8NH85 324 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 TAS1R2Q8TE23 839 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 HDAC2Q92769 488 aaKnown RBP3□□□□□ -1.93
HDGFL3-202ENST00000562702 RHBDF1Q96CC6 855 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 WDFY2Q96P53 400 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 NCAPGQ9BPX3 1015 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 MUC13Q9H3R2 512 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 PDZD7Q9H5P4 517 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 SH2D4AQ9H788 454 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 KRT84Q9NSB2 600 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 SMC4Q9NTJ3 1288 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 COPG2Q9UBF2 871 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 PADI3Q9ULW8 664 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 MTMR6Q9Y217 621 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 OR2W1Q9Y3N9 320 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 CACNA1FO60840 1977 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 DNMBPQ6XZF7 1577 aa3□□□□□ -1.93
HDGFL3-202ENST00000562702 PBRM1Q86U86 1689 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 POLA1P09884 1462 aaPredicted RBP2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 FAM90A26D6RGX4 464 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 DVL1O14640 695 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 MAP2K7O14733 419 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 CAPN9O14815 690 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 ATP2A1O14983 1001 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 ANKRD28O15084 1053 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 ZNHIT1O43257 154 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 RNASEH2AO75792 299 aaKnown RBP2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 ACTN1P12814 892 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 LAMP2P13473 410 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 TMEM11P17152 192 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 UGT1A1P22309 533 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 PPARGP37231 505 aaPredicted RBP2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 DVL1P1P54792 670 aaPredicted RBP2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 ISL1P61371 349 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 PRAMEP78395 509 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 SETQ01105 290 aaPredicted RBP2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 GAGE5Q13069 117 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 GAGE6Q13070 117 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 KRT32Q14532 448 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 PDSS1Q5T2R2 415 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 ACSM2BQ68CK6 577 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 GLDNQ6ZMI3 551 aaPredicted RBP2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 KCTD8Q6ZWB6 473 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 PLEKHM3Q6ZWE6 761 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 RSRC2Q7L4I2 434 aaKnown RBP2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 DSG4Q86SJ6 1040 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 SDCCAG8Q86SQ7 713 aaPredicted RBP2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 NFE4Q86UQ8 179 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 KRTAP7-1Q8IUC3 87 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 MAP7D3Q8IWC1 876 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 HMGCLL1Q8TB92 370 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 PPP4R1Q8TF05 950 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 MOAP1Q96BY2 351 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 C1orf74Q96LT6 269 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 ZNF583Q96ND8 569 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 TMEM39BQ9GZU3 492 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 PIGMQ9H3S5 423 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 ZHX3Q9H4I2 956 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 R3HDM2Q9Y2K5 976 aaKnown RBP2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 ZNF711Q9Y462 761 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 CLIC4Q9Y696 253 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 PIAS3Q9Y6X2 628 aa2.99□□□□□ -1.93
HDGFL3-202ENST00000562702 WDR97A6NE52 1622 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms