RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 RUBCNLQ9H714 662 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 ELAC1Q9H777 363 aaKnown RBP7.43□□□□□ -1.22
CFDP1-202ENST00000562602 NOL11Q9H8H0 719 aaKnown RBP7.43□□□□□ -1.22
CFDP1-202ENST00000562602 AGPAT4Q9NRZ5 378 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 NDFIP2Q9NV92 336 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 NUDT4Q9NZJ9 180 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 PKD2L2Q9NZM6 624 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 TMEM9Q9P0T7 183 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 UBA2Q9UBT2 640 aaPredicted RBP7.43□□□□□ -1.22
CFDP1-202ENST00000562602 MAGEL2Q9UJ55 1249 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 TRMT6Q9UJA5 497 aaKnown RBP7.43□□□□□ -1.22
CFDP1-202ENST00000562602 ANAPC2Q9UJX6 822 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 APPL1Q9UKG1 709 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 FIS1Q9Y3D6 152 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 PCDHB1Q9Y5F3 818 aa7.43□□□□□ -1.22
CFDP1-202ENST00000562602 OAS3Q9Y6K5 1087 aaKnown RBP7.43□□□□□ -1.22
CFDP1-202ENST00000562602 SLC12A8A0AV02 714 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 ILVBLA1L0T0 632 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 CCDC162PA2VCL2 907 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 TRIM64A6NGJ6 449 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 CCDC154A6NI56 674 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 SHISA8B8ZZ34 492 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 H3BMM5 538 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 H7C0S8 307 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 ARNTLO00327 626 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 UBFD1O14562 309 aaKnown RBP7.42□□□□□ -1.22
CFDP1-202ENST00000562602 PIP5K1BO14986 540 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 INSIG1O15503 277 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 KDELR3O43731 214 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 NOL3O60936 208 aaKnown RBP7.42□□□□□ -1.22
CFDP1-202ENST00000562602 DNAJB5O75953 348 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 LDLRP01130 860 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 SLC4A1P02730 911 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 ESR1P03372 595 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 ENO2P09104 434 aaPredicted RBP7.42□□□□□ -1.22
CFDP1-202ENST00000562602 ZDHHC11BP0C7U3 371 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 PRR35P0CG20 571 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 HAPLN1P10915 354 aaPredicted RBP7.42□□□□□ -1.22
CFDP1-202ENST00000562602 PKMP14618 531 aaKnown RBP7.42□□□□□ -1.22
CFDP1-202ENST00000562602 CDH2P19022 906 aaPredicted RBP7.42□□□□□ -1.22
CFDP1-202ENST00000562602 TACR2P21452 398 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 LPOP22079 712 aaPredicted RBP7.42□□□□□ -1.22
CFDP1-202ENST00000562602 SLC6A2P23975 617 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 PTGER3P43115 390 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 AFF1P51825 1210 aaKnown RBP7.42□□□□□ -1.22
CFDP1-202ENST00000562602 ZNF140P52738 457 aaPredicted RBP7.42□□□□□ -1.22
CFDP1-202ENST00000562602 PLK1P53350 603 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 FCGRTP55899 365 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 IL2P60568 153 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 SNRPNP63162 240 aaKnown RBP7.42□□□□□ -1.22
CFDP1-202ENST00000562602 CDKL1Q00532 357 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 MERTKQ12866 999 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 PRKG2Q13237 762 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 NFYCQ13952 458 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 MRPL58Q14197 206 aaKnown RBP7.42□□□□□ -1.22
CFDP1-202ENST00000562602 ATP6AP1Q15904 470 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 FXNQ16595 210 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 CCL14Q16627 93 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 PPP1R3AQ16821 1122 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 MYLK3Q32MK0 819 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 CTXN3Q4LDR2 81 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 ATP6AP1LQ52LC2 224 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 ZNF789Q5FWF6 425 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 LYPLAL1Q5VWZ2 237 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 TTC33Q6PID6 262 aaPredicted RBP7.42□□□□□ -1.22
CFDP1-202ENST00000562602 TMEM207Q6UWW9 146 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 CXCL17Q6UXB2 119 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 CHST9Q7L1S5 443 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 GLT6D1Q7Z4J2 308 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 CTU1Q7Z7A3 348 aaKnown RBP7.42□□□□□ -1.22
CFDP1-202ENST00000562602 PATL1Q86TB9 770 aaKnown RBP7.42□□□□□ -1.22
CFDP1-202ENST00000562602 GPSM1Q86YR5 675 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 PHYKPLQ8IUZ5 450 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 FUNDC1Q8IVP5 155 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 SLC15A3Q8IY34 581 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 ZNF295-AS1Q8N0V1 137 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 TMEM199Q8N511 208 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 DHRSXQ8N5I4 330 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 DPP10Q8N608 796 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 DRAXINQ8NBI3 349 aaPredicted RBP7.42□□□□□ -1.22
CFDP1-202ENST00000562602 GLB1L3Q8NCI6 653 aaPredicted RBP7.42□□□□□ -1.22
CFDP1-202ENST00000562602 OR52K2Q8NGK3 314 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 HMGCLL1Q8TB92 370 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 GIPC2Q8TF65 315 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 CANT1Q8WVQ1 401 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 KCNJ9Q92806 393 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 SLCO4A1Q96BD0 722 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 PTERQ96BW5 349 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 PLD4Q96BZ4 506 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 NRBF2Q96F24 287 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 ZNF419Q96HQ0 510 aaPredicted RBP7.42□□□□□ -1.22
CFDP1-202ENST00000562602 DNAJC1Q96KC8 554 aaKnown RBP7.42□□□□□ -1.22
CFDP1-202ENST00000562602 KLHL5Q96PQ7 755 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 ZNF382Q96SR6 550 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 ZBTB18Q99592 522 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 KCTD14Q9BQ13 255 aaPredicted RBP7.42□□□□□ -1.22
CFDP1-202ENST00000562602 PAAF1Q9BRP4 392 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 LRRC3Q9BY71 257 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 OSBPL6Q9BZF3 934 aa7.42□□□□□ -1.22
CFDP1-202ENST00000562602 PCDHAC1Q9H158 963 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms