RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 CREG1O75629 220 aa11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 RFPL1O75677 317 aa11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 KIAA0754O94854 1291 aa11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 JCHAINP01591 159 aa11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 FURINP09958 794 aa11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 CCNYL3P0C7X3 344 aa11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 ZNF7P17097 686 aaPredicted RBP11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 CAPZBP47756 277 aa11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 LEPRP48357 1165 aaKnown RBP11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 SEPHS1P49903 392 aa11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 PMS2P54278 862 aa11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 IFI35P80217 286 aaPredicted RBP11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 SLC10A2Q12908 348 aaPredicted RBP11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 INSCQ1MX18 579 aa11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 ZNF648Q5T619 568 aaPredicted RBP11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 AGAP9Q5VTM2 703 aa11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 ASB18Q6ZVZ8 466 aa11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 TMC3Q7Z5M5 1100 aa11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 LRRTM4Q86VH4 590 aa11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 LURAP1LQ8IV03 231 aa11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 RASGRP3Q8IV61 690 aa11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 APLFQ8IW19 511 aaPredicted RBP11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 PQLC3Q8N755 202 aa11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 CNTD1Q8N815 330 aa11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 FCRL4Q96PJ5 515 aa11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 TRIB3Q96RU7 358 aa11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 TIMM29Q9BSF4 260 aa11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 SLC40A1Q9NP59 571 aa11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 ARFGAP3Q9NP61 516 aa11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 DTLQ9NZJ0 730 aa11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 SLC23A2Q9UGH3 650 aa11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 PADI1Q9ULC6 663 aa11.64□□□□□ -0.55
CARMIL3-204ENST00000561354 A0A087X0T9 212 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 A0A1W2PQJ5 194 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 PDZK1P1A8MUH7 402 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 GOLGA6L6A8MZA4 724 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 ESPNB1AK53 854 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 C21orf140B9A014 251 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 KCNK1O00180 336 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 KATNA1O75449 491 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 SPAG6O75602 509 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 RASSF9O75901 435 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 SERPING1P05155 500 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 KRT7P08729 469 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 FAM228BP0C875 321 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 BRAFP15056 766 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 NELFEP18615 380 aaKnown RBP11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 NR1D1P20393 614 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 IDSP22304 550 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 MLLT10P55197 1068 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 TPM4P67936 248 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 PPIDQ08752 370 aaKnown RBP11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 DNASE1L3Q13609 305 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 GALNT3Q14435 633 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 CACHD1Q5VU97 1274 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 ALS2CLQ60I27 953 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 ALKBH5Q6P6C2 394 aaKnown RBP11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 CRTC3Q6UUV7 619 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 BPHLQ86WA6 291 aaPredicted RBP11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 PPP1R3BQ86XI6 285 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 ZNF547Q8IVP9 402 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 CCNYQ8ND76 341 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 LRRN4Q8WUT4 740 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 SEC14L1Q92503 715 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 RSC1A1Q92681 617 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 ZDHHC12Q96GR4 267 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 XPO4Q9C0E2 1151 aaKnown RBP11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 CBX8Q9HC52 389 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 LHX9Q9NQ69 397 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 SEMA5BQ9P283 1151 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 LNPEPQ9UIQ6 1025 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 TLK1Q9UKI8 766 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 DNAJC16Q9Y2G8 782 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 ZNF106Q9H2Y7 1883 aaKnown RBP11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 COL12A1Q99715 3063 aa11.63□□□□□ -0.55
CARMIL3-204ENST00000561354 FLNCQ14315 2725 aa11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 PIPSLA2A3N6 862 aa11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 BLACEA4D250 179 aa11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 CDC14CA4D256 554 aa11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 KIF1CO43896 1103 aaKnown RBP11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 KCNJ13O60928 360 aa11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 PROSCO94903 275 aa11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 CDK14O94921 469 aa11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 PTMAP06454 111 aaKnown RBP11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 RPL10P27635 214 aaKnown RBP11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 GJC1P36383 396 aa11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 TAS2R40P59535 323 aa11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 ZBTB17Q13105 803 aa11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 SEMA5AQ13591 1074 aa11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 GPR18Q14330 331 aa11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 SLC14A2Q15849 920 aa11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 SEPT7Q16181 437 aaKnown RBP11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 SARM1Q6SZW1 724 aa11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 TMEM135Q86UB9 458 aa11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 UBXN4Q92575 508 aa11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 TADA1Q96BN2 335 aa11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 CXorf40BQ96DE9 158 aa11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 IMP4Q96G21 291 aaKnown RBP11.62□□□□□ -0.55
CARMIL3-204ENST00000561354 ELMO2Q96JJ3 720 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms