RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 SERPINB4P48594 390 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 ATP6V0D1P61421 351 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 TMEM115Q12893 351 aaPredicted RBP10.19□□□□□ -0.78
USP3-219ENST00000561326 CSHL1Q14406 222 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 TTLL9Q3SXZ7 439 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 ATG16L1Q676U5 607 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 RAET1GQ6H3X3 334 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 PNCKQ6P2M8 343 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 CDHR3Q6ZTQ4 885 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 MICALCLQ6ZW33 695 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 CPLX4Q7Z7G2 160 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 HORMAD1Q86X24 394 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 PHYKPLQ8IUZ5 450 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 SIX5Q8N196 739 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 PLD6Q8N2A8 252 aaKnown RBP10.19□□□□□ -0.78
USP3-219ENST00000561326 DDHD1Q8NEL9 900 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 PPP1R14CQ8TAE6 165 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 KCTD4Q8WVF5 259 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 HMGB4Q8WW32 186 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 ASB12Q8WXK4 309 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 NXNL1Q96CM4 212 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 CCDC126Q96EE4 140 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 GPR21Q99679 349 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 C1QTNF1Q9BXJ1 281 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 C1QTNF2Q9BXJ5 285 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 SLC17A9Q9BYT1 436 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 EPN3Q9H201 632 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 MRPL46Q9H2W6 279 aaKnown RBP10.19□□□□□ -0.78
USP3-219ENST00000561326 EPHX3Q9H6B9 360 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 SGK2Q9HBY8 427 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 SARS2Q9NP81 518 aaKnown RBP10.19□□□□□ -0.78
USP3-219ENST00000561326 ITM2CQ9NQX7 267 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 LATS2Q9NRM7 1088 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 SPATS2LQ9NUQ6 558 aaKnown RBP10.19□□□□□ -0.78
USP3-219ENST00000561326 PCM1Q15154 2024 aa10.19□□□□□ -0.78
USP3-219ENST00000561326 WDR91A4D1P6 747 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 KRBA1A5PL33 1030 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 GPR39O43194 453 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 VEGFDO43915 354 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 NIPSNAP2O75323 286 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 BPGMP07738 259 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 MYL2P10916 166 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 ZNF37AP17032 561 aaPredicted RBP10.18□□□□□ -0.78
USP3-219ENST00000561326 GM2AP17900 193 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 GABRG2P18507 467 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 NDUFV2P19404 249 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 TARSP26639 723 aaKnown RBP10.18□□□□□ -0.78
USP3-219ENST00000561326 TEAD1P28347 426 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 OXTRP30559 389 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 TPMTP51580 245 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 PRKAA2P54646 552 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 ADPRHP54922 357 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 IRF9Q00978 393 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 GTF2H3Q13889 308 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 ZNF460Q14592 562 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 PDK4Q16654 411 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 CTSL3PQ5NE16 218 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 LRRC8EQ6NSJ5 796 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 C16orf46Q6P387 395 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 PAQR3Q6TCH7 311 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 ADAMTSL4Q6UY14 1074 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 OTOAQ7RTW8 1153 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 FAM124AQ86V42 546 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 CENPLQ8N0S6 344 aaPredicted RBP10.18□□□□□ -0.78
USP3-219ENST00000561326 ZNF687Q8N1G0 1237 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 FSTL5Q8N475 847 aaPredicted RBP10.18□□□□□ -0.78
USP3-219ENST00000561326 CLDN19Q8N6F1 224 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 FLCNQ8NFG4 579 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 TSTD1Q8NFU3 115 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 RAB3IL1Q8TBN0 382 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 ZNF75CPQ92670 426 aaPredicted RBP10.18□□□□□ -0.78
USP3-219ENST00000561326 CHMP6Q96FZ7 201 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 PDLIM5Q96HC4 596 aaKnown RBP10.18□□□□□ -0.78
USP3-219ENST00000561326 HIC2Q96JB3 615 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 ZNF514Q96K75 400 aaPredicted RBP10.18□□□□□ -0.78
USP3-219ENST00000561326 ASB2Q96Q27 587 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 BOCQ9BWV1 1114 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 DERL2Q9GZP9 239 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 BTBD1Q9H0C5 482 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 NSRP1Q9H0G5 558 aaKnown RBP10.18□□□□□ -0.78
USP3-219ENST00000561326 SLC6A17Q9H1V8 727 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 C12orf65Q9H3J6 166 aaKnown RBP10.18□□□□□ -0.78
USP3-219ENST00000561326 MANSC1Q9H8J5 431 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 TRIM39Q9HCM9 518 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 SERGEFQ9UGK8 458 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 TRIOO75962 3097 aa10.18□□□□□ -0.78
USP3-219ENST00000561326 ZFC3H1O60293 1989 aaKnown RBP10.17□□□□□ -0.78
USP3-219ENST00000561326 A0A1W2PQU0 124 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 PRR23AA6NEV1 266 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 SYCE1LA8MT33 242 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 FADS2P1A8MWK0 482 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 TCP11X1B4DZS4 312 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 EIF3FO00303 357 aaPredicted RBP10.17□□□□□ -0.78
USP3-219ENST00000561326 INPP4BO15327 924 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 DNAJC6O75061 913 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 ZNF217O75362 1048 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 H2AFYO75367 372 aaKnown RBP10.17□□□□□ -0.78
USP3-219ENST00000561326 CDK14O94921 469 aa10.17□□□□□ -0.78
USP3-219ENST00000561326 PAK4O96013 591 aaPredicted RBP10.17□□□□□ -0.78
USP3-219ENST00000561326 GSTM1P09488 218 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms