RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 ACACBO00763 2458 aa19.63■□□□□ 0.73
TSPAN3-210ENST00000561277 HEATR9A2RTY3 570 aa19.63■□□□□ 0.73
TSPAN3-210ENST00000561277 CTAGE9A4FU28 777 aa19.63■□□□□ 0.73
TSPAN3-210ENST00000561277 MROH6A6NGR9 719 aa19.63■□□□□ 0.73
TSPAN3-210ENST00000561277 RHPN2P1A8MT19 583 aa19.63■□□□□ 0.73
TSPAN3-210ENST00000561277 NUDT21O43809 227 aaKnown RBP19.63■□□□□ 0.73
TSPAN3-210ENST00000561277 PRSS56P0CW18 603 aa19.63■□□□□ 0.73
TSPAN3-210ENST00000561277 CTSCP53634 463 aa19.63■□□□□ 0.73
TSPAN3-210ENST00000561277 SESN2P58004 480 aaPredicted RBP19.63■□□□□ 0.73
TSPAN3-210ENST00000561277 SEPT7Q16181 437 aaKnown RBP19.63■□□□□ 0.73
TSPAN3-210ENST00000561277 CDCP2Q5VXM1 449 aa19.63■□□□□ 0.73
TSPAN3-210ENST00000561277 PAPD7Q5XG87 772 aaKnown RBP19.63■□□□□ 0.73
TSPAN3-210ENST00000561277 CCNJLQ8IV13 435 aa19.63■□□□□ 0.73
TSPAN3-210ENST00000561277 SLC37A2Q8TED4 501 aa19.63■□□□□ 0.73
TSPAN3-210ENST00000561277 CDKN2AIPNLQ96HQ2 116 aa19.63■□□□□ 0.73
TSPAN3-210ENST00000561277 DEPDC7Q96QD5 511 aa19.63■□□□□ 0.73
TSPAN3-210ENST00000561277 TIMM29Q9BSF4 260 aa19.63■□□□□ 0.73
TSPAN3-210ENST00000561277 TPRP12270 2363 aaKnown RBP19.63■□□□□ 0.73
TSPAN3-210ENST00000561277 CDKN1CP49918 316 aaPredicted RBP19.62■□□□□ 0.73
TSPAN3-210ENST00000561277 ARSDP51689 593 aa19.62■□□□□ 0.73
TSPAN3-210ENST00000561277 CCL7P80098 99 aa19.62■□□□□ 0.73
TSPAN3-210ENST00000561277 SPIDRQ14159 915 aa19.62■□□□□ 0.73
TSPAN3-210ENST00000561277 SKIDA1Q1XH10 827 aa19.62■□□□□ 0.73
TSPAN3-210ENST00000561277 FNBP1LQ5T0N5 605 aa19.62■□□□□ 0.73
TSPAN3-210ENST00000561277 RBM44Q6ZP01 1051 aaKnown RBP19.62■□□□□ 0.73
TSPAN3-210ENST00000561277 C11orf96Q7Z7L8 435 aa19.62■□□□□ 0.73
TSPAN3-210ENST00000561277 NXPE1Q8N323 547 aa19.62■□□□□ 0.73
TSPAN3-210ENST00000561277 ULK4Q96C45 1275 aa19.62■□□□□ 0.73
TSPAN3-210ENST00000561277 CCDC97Q96F63 343 aaPredicted RBP19.62■□□□□ 0.73
TSPAN3-210ENST00000561277 PRDM8Q9NQV8 689 aa19.62■□□□□ 0.73
TSPAN3-210ENST00000561277 SLC2A6Q9UGQ3 507 aa19.62■□□□□ 0.73
TSPAN3-210ENST00000561277 SAR1BQ9Y6B6 198 aa19.62■□□□□ 0.73
TSPAN3-210ENST00000561277 TCRBV7S3A2A0A539 114 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 OR51F1A6NGY5 319 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 H7C0S8 307 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 FANCGO15287 622 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 CSO75390 466 aaKnown RBP19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 ADRA1DP25100 572 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 PBLDP30039 288 aaPredicted RBP19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 FNTAP49354 379 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 CRADDP78560 199 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 CAMK2BQ13554 666 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 TMEM220Q6QAJ8 160 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 TAS2R42Q7RTR8 314 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 SPRED1Q7Z699 444 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 SFRP1Q8N474 314 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 PPHLN1Q8NEY8 458 aaKnown RBP19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 OR13J1Q8NGT2 312 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 GRK7Q8WTQ7 553 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 SGF29Q96ES7 293 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 DCUN1D1Q96GG9 259 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 ZNF778Q96MU6 729 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 GFM1Q96RP9 751 aaKnown RBP19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 DDX47Q9H0S4 455 aaKnown RBP19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 TCAF1Q9Y4C2 921 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 PCDHB1Q9Y5F3 818 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 A0A1W2PQM1 296 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 A6NCN8 305 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 TRABD2BA6NFA1 517 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 AGAP14A8MT82 685 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 PDZK1P1A8MUH7 402 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 TCEA3O75764 348 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 F3P13726 295 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 PNLIPP16233 465 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 VCLP18206 1134 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 TPSB2P20231 275 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 ALDH4A1P30038 563 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 LAMB3Q13751 1172 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 TPSAB1Q15661 275 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 TSTD2Q5T7W7 516 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 ZNF761Q86XN6 746 aaPredicted RBP19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 BEND7Q8N7W2 519 aaPredicted RBP19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 WDR48Q8TAF3 677 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 RANBP9Q96S59 729 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 COPS8Q99627 209 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 LRRN3Q9H3W5 708 aa19.61■□□□□ 0.73
TSPAN3-210ENST00000561277 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.6■□□□□ 0.73
TSPAN3-210ENST00000561277 PPM1DO15297 605 aa19.6■□□□□ 0.73
TSPAN3-210ENST00000561277 POP7O75817 140 aaKnown RBP19.6■□□□□ 0.73
TSPAN3-210ENST00000561277 RALBP11234 206 aa19.6■□□□□ 0.73
TSPAN3-210ENST00000561277 SLC2A4P14672 509 aa19.6■□□□□ 0.73
TSPAN3-210ENST00000561277 RPL10P27635 214 aaKnown RBP19.6■□□□□ 0.73
TSPAN3-210ENST00000561277 CLCNKAP51800 687 aa19.6■□□□□ 0.73
TSPAN3-210ENST00000561277 DRG2P55039 364 aaKnown RBP19.6■□□□□ 0.73
TSPAN3-210ENST00000561277 OR1D5P58170 312 aa19.6■□□□□ 0.73
TSPAN3-210ENST00000561277 CDK16Q00536 496 aa19.6■□□□□ 0.73
TSPAN3-210ENST00000561277 B4GALNT1Q00973 533 aa19.6■□□□□ 0.73
TSPAN3-210ENST00000561277 CACNG1Q06432 222 aa19.6■□□□□ 0.73
TSPAN3-210ENST00000561277 KCNJ11Q14654 390 aa19.6■□□□□ 0.73
TSPAN3-210ENST00000561277 AMZ1Q400G9 498 aa19.6■□□□□ 0.73
TSPAN3-210ENST00000561277 GPR33Q49SQ1 333 aa19.6■□□□□ 0.73
TSPAN3-210ENST00000561277 ANKRD22Q5VYY1 191 aa19.6■□□□□ 0.73
TSPAN3-210ENST00000561277 IYDQ6PHW0 289 aa19.6■□□□□ 0.73
TSPAN3-210ENST00000561277 AMZ2Q86W34 360 aa19.6■□□□□ 0.73
TSPAN3-210ENST00000561277 SERPINA9Q86WD7 417 aa19.6■□□□□ 0.73
TSPAN3-210ENST00000561277 CREG2Q8IUH2 290 aa19.6■□□□□ 0.73
TSPAN3-210ENST00000561277 HDAC10Q969S8 669 aa19.6■□□□□ 0.73
TSPAN3-210ENST00000561277 ATXN7L1Q9ULK2 861 aaPredicted RBP19.6■□□□□ 0.73
TSPAN3-210ENST00000561277 NEU2Q9Y3R4 380 aa19.6■□□□□ 0.73
TSPAN3-210ENST00000561277 COL27A1Q8IZC6 1860 aaPredicted RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms