RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 DOCK4Q8N1I0 1966 aa10.59□□□□□ -0.71
TPM1-229ENST00000561242 CCDC162PA2VCL2 907 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 MROH6A6NGR9 719 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 OR2AG2A6NM03 316 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 H7C0S8 307 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 CDX4O14627 284 aaPredicted RBP10.58□□□□□ -0.72
TPM1-229ENST00000561242 YY2O15391 372 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 AVILO75366 819 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 MTX2O75431 263 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 POP7O75817 140 aaKnown RBP10.58□□□□□ -0.72
TPM1-229ENST00000561242 USP1O94782 785 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 SEC31AO94979 1220 aaKnown RBP10.58□□□□□ -0.72
TPM1-229ENST00000561242 VIPP01282 170 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 APOA4P06727 396 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 CEACAM5P06731 702 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 SLC35G4P0C7Q5 338 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 ZNF8P17098 575 aaPredicted RBP10.58□□□□□ -0.72
TPM1-229ENST00000561242 CHRM3P20309 590 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 ACRV1P26436 265 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 GRIA1P42261 906 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 ZNF140P52738 457 aaPredicted RBP10.58□□□□□ -0.72
TPM1-229ENST00000561242 CRADDP78560 199 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 IHHQ14623 411 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 PTPRCAPQ14761 206 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 ANKRD20A4Q4UJ75 823 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 HIBCHQ6NVY1 386 aaPredicted RBP10.58□□□□□ -0.72
TPM1-229ENST00000561242 NEPROQ6NW34 567 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 ARMC6Q6NXE6 501 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 KLHL35Q6PF15 583 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 KLHDC8BQ8IXV7 354 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 ZBED8Q8IZ13 594 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 SLC22A18ASQ8N1D0 253 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 ARL10Q8N8L6 244 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 DDHD1Q8NEL9 900 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 OR4C6Q8NH72 309 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 WDR48Q8TAF3 677 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 TMEM159Q96B96 161 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 EBNA1BP2Q99848 306 aaKnown RBP10.58□□□□□ -0.72
TPM1-229ENST00000561242 GORASP1Q9BQQ3 440 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 LRRC1Q9BTT6 524 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 TMEM168Q9H0V1 697 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 FGF22Q9HCT0 170 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 SAYSD1Q9NPB0 183 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 SMOXQ9NWM0 555 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 ACSL5Q9ULC5 683 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 PADI4Q9UM07 663 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 HEBP2Q9Y5Z4 205 aa10.58□□□□□ -0.72
TPM1-229ENST00000561242 DCDC2BA2VCK2 349 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 FADS2P1A8MWK0 482 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 CCL22O00626 93 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 ZNF500O60304 480 aaPredicted RBP10.57□□□□□ -0.72
TPM1-229ENST00000561242 RPN2P04844 631 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 DRG2P55039 364 aaKnown RBP10.57□□□□□ -0.72
TPM1-229ENST00000561242 CTBSQ01459 385 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 SLC7A5Q01650 507 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 DHX9Q08211 1270 aaKnown RBP10.57□□□□□ -0.72
TPM1-229ENST00000561242 ILKQ13418 452 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 CUL1Q13616 776 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 PLA2G4EQ3MJ16 856 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 TTLL9Q3SXZ7 439 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 PYCR3Q53H96 274 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 TEX35Q5T0J7 233 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 C6orf132Q5T0Z8 1188 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 ANKRD22Q5VYY1 191 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 KIAA0930Q6ICG6 404 aaPredicted RBP10.57□□□□□ -0.72
TPM1-229ENST00000561242 PSAPL1Q6NUJ1 521 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 ZNF572Q7Z3I7 529 aaPredicted RBP10.57□□□□□ -0.72
TPM1-229ENST00000561242 ADGRG6Q86SQ4 1221 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 KCNMB4Q86W47 210 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 CFAP206Q8IYR0 622 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 ELMO1Q92556 727 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 UBXN4Q92575 508 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 SGF29Q96ES7 293 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 PDXPQ96GD0 296 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 COX14Q96I36 57 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 TIMM29Q9BSF4 260 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 LRRC61Q9BV99 259 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.57□□□□□ -0.72
TPM1-229ENST00000561242 TAAR2Q9P1P5 351 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 ZFATQ9P243 1243 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 FAM8A1Q9UBU6 413 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 KCNK6Q9Y257 313 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 PRKAB1Q9Y478 270 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 PCDHB1Q9Y5F3 818 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 COMMD10Q9Y6G5 202 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 SLCO1B1Q9Y6L6 691 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 BDP1A6H8Y1 2624 aa10.57□□□□□ -0.72
TPM1-229ENST00000561242 MYO18AQ92614 2054 aaKnown RBP10.57□□□□□ -0.72
TPM1-229ENST00000561242 TRBV23OR9-2A0A075B6M9 112 aa10.56□□□□□ -0.72
TPM1-229ENST00000561242 KIR2DS5A0A0G2JLQ3 304 aa10.56□□□□□ -0.72
TPM1-229ENST00000561242 A0A0G2JNG1 304 aa10.56□□□□□ -0.72
TPM1-229ENST00000561242 TCRBV7S3A2A0A539 114 aa10.56□□□□□ -0.72
TPM1-229ENST00000561242 MGAT4DA6NG13 374 aa10.56□□□□□ -0.72
TPM1-229ENST00000561242 TMX2-CTNND1H3BSU7 103 aa10.56□□□□□ -0.72
TPM1-229ENST00000561242 KIR2DS3K7RE56 304 aa10.56□□□□□ -0.72
TPM1-229ENST00000561242 PRMT5O14744 637 aaPredicted RBP10.56□□□□□ -0.72
TPM1-229ENST00000561242 SIGLEC6O43699 453 aa10.56□□□□□ -0.72
TPM1-229ENST00000561242 SPAG6O75602 509 aa10.56□□□□□ -0.72
TPM1-229ENST00000561242 GSTA2P09210 222 aa10.56□□□□□ -0.72
TPM1-229ENST00000561242 RHOXF2BP0C7M4 288 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms