RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 TMEM35BQ8NCS4 154 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 CCDC34Q96HJ3 373 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 MDFIQ99750 246 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 C17orf62Q9BQA9 187 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 DHRS4Q9BTZ2 278 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 RAB33BQ9H082 229 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 NOL6Q9H6R4 1146 aaKnown RBP9.36□□□□□ -0.91
HERC1-210ENST00000560897 SP110Q9HB58 689 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 ZBTB20Q9HC78 741 aaPredicted RBP9.36□□□□□ -0.91
HERC1-210ENST00000560897 ATP13A2Q9NQ11 1180 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 PLCB1Q9NQ66 1216 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 SOHLH2Q9NX45 425 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 CSAG2Q9Y5P2 127 aa9.36□□□□□ -0.91
HERC1-210ENST00000560897 A0A0U1RQS6 177 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 ARHGAP42A6NI28 874 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 J3KR12 359 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 PCDH17O14917 1159 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 SEC16AO15027 2179 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 PRAMEF11O60813 436 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 SOD1P00441 154 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 ATP1A1P05023 1023 aaKnown RBP9.35□□□□□ -0.91
HERC1-210ENST00000560897 ZSCAN22P10073 491 aaPredicted RBP9.35□□□□□ -0.91
HERC1-210ENST00000560897 FOSL1P15407 271 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 AGXTP21549 392 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 LHCGRP22888 699 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 SDC4P31431 198 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 FOLR3P41439 243 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 CA7P43166 264 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 SYKP43405 635 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 RENBPP51606 427 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 SSPNQ14714 243 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 GPR19Q15760 415 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 SEPT7Q16181 437 aaKnown RBP9.35□□□□□ -0.91
HERC1-210ENST00000560897 AGAP7PQ5VUJ5 663 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 LCN10Q6JVE6 187 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 FAM198BQ6UWH4 519 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 MEX3BQ6ZN04 569 aaKnown RBP9.35□□□□□ -0.91
HERC1-210ENST00000560897 KRBA2Q6ZNG9 492 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 BNIPLQ7Z465 357 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 TMEM200AQ86VY9 491 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 NDUFAF2Q8N183 169 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 CXorf40BQ96DE9 158 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 AGAP4Q96P64 663 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 FOXC2Q99958 501 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 ABCG8Q9H221 673 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 PDFQ9HBH1 243 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 KLC4Q9NSK0 619 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 RMND1Q9NWS8 449 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 CHMP5Q9NZZ3 219 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 GPN3Q9UHW5 284 aaPredicted RBP9.35□□□□□ -0.91
HERC1-210ENST00000560897 CFAP45Q9UL16 551 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 NEU3Q9UQ49 428 aa9.35□□□□□ -0.91
HERC1-210ENST00000560897 JMJD1CQ15652 2540 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 TLCD2A6NGC4 264 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 NPIPB15A6NHN6 443 aaPredicted RBP9.34□□□□□ -0.91
HERC1-210ENST00000560897 WASH4PA8MWX3 477 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 MASP2O00187 686 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 SOCS5O75159 536 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 CYP2A7P20853 494 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 SLC19A1P41440 591 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 PRCPP42785 496 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 KIR3DL1P43629 444 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 ADCY2Q08462 1091 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 NSUN2Q08J23 767 aaKnown RBP eCLIP9.34□□□□□ -0.91
HERC1-210ENST00000560897 AIMP2Q13155 320 aaKnown RBP9.34□□□□□ -0.91
HERC1-210ENST00000560897 GPR18Q14330 331 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 RFTN1Q14699 578 aaPredicted RBP9.34□□□□□ -0.91
HERC1-210ENST00000560897 PLCL1Q15111 1095 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 INSCQ1MX18 579 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 SKOR2Q2VWA4 1001 aaPredicted RBP9.34□□□□□ -0.91
HERC1-210ENST00000560897 SMYD5Q6GMV2 418 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 TRIM72Q6ZMU5 477 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 CXXC5Q7LFL8 322 aaKnown RBP9.34□□□□□ -0.91
HERC1-210ENST00000560897 BIVMQ86UB2 503 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 UMODL1-AS1Q8N2C9 162 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 D2HGDHQ8N465 521 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 AOPEPQ8N6M6 819 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 SLC38A9Q8NBW4 561 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 ANKRD20A12PQ8NF67 263 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 TEKT4Q8WW24 435 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 NR4A3Q92570 626 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 SCAMP4Q969E2 229 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 COX14Q96I36 57 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 CEP63Q96MT8 703 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 CD180Q99467 661 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 MAP3K3Q99759 626 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 DPH2Q9BQC3 489 aaPredicted RBP9.34□□□□□ -0.91
HERC1-210ENST00000560897 ACTR5Q9H9F9 607 aaPredicted RBP9.34□□□□□ -0.91
HERC1-210ENST00000560897 METTL5Q9NRN9 209 aaKnown RBP9.34□□□□□ -0.91
HERC1-210ENST00000560897 SEMA3GQ9NS98 782 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 P4HTMQ9NXG6 502 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 SEMA5BQ9P283 1151 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 SIK3Q9Y2K2 1263 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 SPTBP11277 2137 aa9.34□□□□□ -0.91
HERC1-210ENST00000560897 TRIM49BA6NDI0 452 aa9.33□□□□□ -0.92
HERC1-210ENST00000560897 GOLGA6L4A6NEF3 574 aa9.33□□□□□ -0.92
HERC1-210ENST00000560897 BECN2A8MW95 431 aa9.33□□□□□ -0.92
HERC1-210ENST00000560897 FGF10O15520 208 aaPredicted RBP9.33□□□□□ -0.92
HERC1-210ENST00000560897 UNC5CO95185 931 aa9.33□□□□□ -0.92
HERC1-210ENST00000560897 ZBTB11O95625 1053 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms