RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 STK39Q9UEW8 545 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 ASIC3Q9UHC3 531 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 DERAQ9Y315 318 aa6.71□□□□□ -1.34
TSPAN3-209ENST00000560715 LTBP1Q14766 1721 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 NRXN2Q9P2S2 1712 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 UBA6A0AVT1 1052 aaPredicted RBP6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 A8MXE2 369 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 LACTBL1A8MY62 500 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 C1QTNF9BB2RNN3 333 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 H3BNH8 94 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 TM9SF1O15321 606 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 ABHD16AO95870 558 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 SBK3P0C264 359 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 PSMC3P17980 439 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 CCNA2P20248 432 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 STAT5AP42229 794 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 CCR10P46092 362 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 LUMP51884 338 aaPredicted RBP6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 MLLT6P55198 1093 aaPredicted RBP6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 TPTEP56180 551 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 GNG2P59768 71 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 BASP1P80723 227 aaKnown RBP6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 TMEM115Q12893 351 aaPredicted RBP6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 PTK6Q13882 451 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 PRKD1Q15139 912 aaPredicted RBP6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 SIX1Q15475 284 aaPredicted RBP6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 PLEKHA7Q6IQ23 1121 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 DPY19L2P1Q6NXN4 242 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 ARMCX2Q7L311 632 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 DEFB132Q7Z7B7 95 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 SETD3Q86TU7 594 aaPredicted RBP6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 SPARTQ8N0X7 666 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 HM13Q8TCT9 377 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 FOXRED1Q96CU9 486 aaPredicted RBP6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 LINC00615Q96LM1 132 aaPredicted RBP6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 ZNF512Q96ME7 567 aaPredicted RBP6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 PSKH2Q96QS6 385 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 CCDC106Q9BWC9 280 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 SLC32A1Q9H598 525 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 SMYD3Q9H7B4 428 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 HEYLQ9NQ87 328 aaPredicted RBP6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 C12orf4Q9NQ89 552 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 KCNH7Q9NS40 1196 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 SOHLH2Q9NX45 425 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 FOCADQ5VW36 1801 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 CYP2D7A0A087X1C5 515 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 FAM172BPA6NC97 362 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 KCNK5O95279 499 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 PCNAP12004 261 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 UCHL3P15374 230 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 NPPBP16860 134 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 CDKL1Q00532 357 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 MDH1BQ5I0G3 518 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 SLX4IPQ5VYV7 408 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 ANKRD26P1Q6NSI1 321 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 CHST9Q7L1S5 443 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 TAS2R42Q7RTR8 314 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 IGFN1Q86VF2 1251 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 SLC13A5Q86YT5 568 aaPredicted RBP6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 CHERPQ8IWX8 916 aaKnown RBP6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 CPNE9Q8IYJ1 553 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 Q8N9G6 341 aaPredicted RBP6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 BRIX1Q8TDN6 353 aaKnown RBP6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 METTL21AQ8WXB1 218 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 TANKQ92844 425 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 MRGPRX4Q96LA9 322 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 C9orf72Q96LT7 481 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 MMP19Q99542 508 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 ZSWIM1Q9BR11 485 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 CALN1Q9BXU9 219 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 MUC13Q9H3R2 512 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 TM7SF3Q9NS93 570 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 TAS2R3Q9NYW6 316 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 UBA2Q9UBT2 640 aaPredicted RBP6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 GGA1Q9UJY5 639 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 POMPQ9Y244 141 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 MYRFQ9Y2G1 1151 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 AP4S1Q9Y587 144 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 KCNE2Q9Y6J6 123 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 IGSF9BQ9UPX0 1349 aa6.7□□□□□ -1.34
TSPAN3-209ENST00000560715 ANKRD31Q8N7Z5 1873 aa6.69□□□□□ -1.34
TSPAN3-209ENST00000560715 A0A1W2PPM1 405 aa6.69□□□□□ -1.34
TSPAN3-209ENST00000560715 TCRBV7S2A1N4TA0A589 114 aa6.69□□□□□ -1.34
TSPAN3-209ENST00000560715 H3BMQ9 156 aa6.69□□□□□ -1.34
TSPAN3-209ENST00000560715 TMX2-CTNND1H3BSU7 103 aa6.69□□□□□ -1.34
TSPAN3-209ENST00000560715 POLRMTO00411 1230 aaKnown RBP6.69□□□□□ -1.34
TSPAN3-209ENST00000560715 PPEF2O14830 753 aa6.69□□□□□ -1.34
TSPAN3-209ENST00000560715 SIGLEC6O43699 453 aa6.69□□□□□ -1.34
TSPAN3-209ENST00000560715 PFKMP08237 780 aa6.69□□□□□ -1.34
TSPAN3-209ENST00000560715 SERPINA4P29622 427 aa6.69□□□□□ -1.34
TSPAN3-209ENST00000560715 GNL1P36915 607 aaPredicted RBP6.69□□□□□ -1.34
TSPAN3-209ENST00000560715 ZNF135P52742 658 aaPredicted RBP6.69□□□□□ -1.34
TSPAN3-209ENST00000560715 NOMO3P69849 1222 aa6.69□□□□□ -1.34
TSPAN3-209ENST00000560715 KCNJ10P78508 379 aa6.69□□□□□ -1.34
TSPAN3-209ENST00000560715 TXNL4AP83876 142 aaKnown RBP6.69□□□□□ -1.34
TSPAN3-209ENST00000560715 TROAPQ12815 778 aa6.69□□□□□ -1.34
TSPAN3-209ENST00000560715 BNIP3Q12983 259 aa6.69□□□□□ -1.34
TSPAN3-209ENST00000560715 TMEM270Q6UE05 265 aa6.69□□□□□ -1.34
TSPAN3-209ENST00000560715 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms