RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 GPRC6AQ5T6X5 926 aa12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 KCTD11Q693B1 232 aa12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 DENND5AQ6IQ26 1287 aa12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 DET1Q7L5Y6 550 aa12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 PRUNE1Q86TP1 453 aa12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 C17orf82Q86X59 251 aaPredicted RBP12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 SFRP1Q8N474 314 aa12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 WDR36Q8NI36 951 aaKnown RBP12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 DCUN1D1Q96GG9 259 aa12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 ETNK1Q9HBU6 452 aa12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 ARNT2Q9HBZ2 717 aa12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 WDR70Q9NW82 654 aa12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 TRMT1Q9NXH9 659 aaKnown RBP12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 PAK5Q9P286 719 aa12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 TMPRSS11EQ9UL52 423 aa12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 JRKLQ9Y4A0 524 aa12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 EPG5Q9HCE0 2579 aa12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 KIR2DS5A0A0G2JLQ3 304 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 A0A0G2JNG1 304 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 ERI2A8K979 691 aaKnown RBP12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 KIR2DS3K7RE56 304 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 CCL22O00626 93 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 GAPDHSO14556 408 aaPredicted RBP12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 B4GAT1O43505 415 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 CPNE6O95741 557 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 APRTP07741 180 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 JMJD7P0C870 316 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 RALBP11234 206 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 ETS1P14921 441 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 ITGALP20701 1170 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 IDSP22304 550 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 PDX1P52945 283 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 DRG2P55039 364 aaKnown RBP12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 BASP1P80723 227 aaKnown RBP12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 B4GALNT1Q00973 533 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 KIR2DS5Q14953 304 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 ZRANB3Q5FWF4 1079 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 FNBP1LQ5T0N5 605 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 NKAIN2Q5VXU1 208 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 IYDQ6PHW0 289 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 TMEM220Q6QAJ8 160 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 LRRC69Q6ZNQ3 347 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 RAB11FIP2Q7L804 512 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 TAS2R42Q7RTR8 314 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 RASGEF1AQ8N9B8 481 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 DDHD1Q8NEL9 900 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 OR52K1Q8NGK4 314 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 OR10G6Q8NH81 332 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 DTX3LQ8TDB6 740 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 HNRNPLLQ8WVV9 542 aaKnown RBP12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 FGF11Q92914 225 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 SH3KBP1Q96B97 665 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 RTP4Q96DX8 246 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 NAF1Q96HR8 494 aaKnown RBP12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 DNAJC1Q96KC8 554 aaKnown RBP12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 TIMM29Q9BSF4 260 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 FAM96AQ9H5X1 160 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 THSD1Q9NS62 852 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 AKAP7Q9P0M2 348 aaPredicted RBP12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 FAM8A1Q9UBU6 413 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 SLC23A2Q9UGH3 650 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 ZKSCAN5Q9Y2L8 839 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 UNC13CQ8NB66 2214 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 DMXL2Q8TDJ6 3036 aa12.78□□□□□ -0.36
CTDSPL2-209ENST00000560620 OR5K4A6NMS3 321 aa12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 LDB2O43679 373 aa12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 KIF5CO60282 957 aa12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 POP7O75817 140 aaKnown RBP12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 TNFSF15O95150 251 aa12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 VIPP01282 170 aa12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 ZSCAN5DPP0CG00 497 aa12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 MC4RP32245 332 aa12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 HALP42357 657 aa12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 FASLGP48023 281 aa12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 KCNJ1P48048 391 aa12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 ZNF140P52738 457 aaPredicted RBP12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 CDH17Q12864 832 aa12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 TBC1D25Q3MII6 688 aa12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 CCDC38Q502W7 563 aa12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 C19orf48Q6RUI8 117 aa12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 ZNF438Q7Z4V0 828 aa12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 AMZ2Q86W34 360 aa12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 JAMLQ86YT9 394 aa12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 ZNF547Q8IVP9 402 aa12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 FBXO39Q8N4B4 442 aa12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 AVL9Q8NBF6 648 aa12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 ULK4Q96C45 1275 aa12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 CXorf40BQ96DE9 158 aa12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 LIN37Q96GY3 246 aaPredicted RBP12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 CMKLR1Q99788 373 aa12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 NUDT22Q9BRQ3 303 aa12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 SEMA6CQ9H3T2 930 aa12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 SARS2Q9NP81 518 aaKnown RBP12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 HOMER3Q9NSC5 361 aa12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 CPNE7Q9UBL6 633 aa12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 USP24Q9UPU5 2620 aa12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 BPTFQ12830 3046 aa12.77□□□□□ -0.37
CTDSPL2-209ENST00000560620 IGHV1OR21-1A0A087WYE8 117 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 PMS2P1A4D2B8 440 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms