RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 NOC3LQ8WTT2 800 aaKnown RBP2.26□□□□□ -2.05
SPG11-222ENST00000560435 RASL10AQ92737 203 aa2.26□□□□□ -2.05
SPG11-222ENST00000560435 STAMQ92783 540 aa2.26□□□□□ -2.05
SPG11-222ENST00000560435 SLX1AQ9BQ83 275 aa2.26□□□□□ -2.05
SPG11-222ENST00000560435 SOSTQ9BQB4 213 aa2.26□□□□□ -2.05
SPG11-222ENST00000560435 HEMGNQ9BXL5 484 aa2.26□□□□□ -2.05
SPG11-222ENST00000560435 LTB4R2Q9NPC1 389 aa2.26□□□□□ -2.05
SPG11-222ENST00000560435 CHST11Q9NPF2 352 aa2.26□□□□□ -2.05
SPG11-222ENST00000560435 GPR83Q9NYM4 423 aa2.26□□□□□ -2.05
SPG11-222ENST00000560435 COQ3Q9NZJ6 369 aa2.26□□□□□ -2.05
SPG11-222ENST00000560435 FEM1BQ9UK73 627 aa2.26□□□□□ -2.05
SPG11-222ENST00000560435 CELA1Q9UNI1 258 aa2.26□□□□□ -2.05
SPG11-222ENST00000560435 UTYO14607 1347 aa2.25□□□□□ -2.05
SPG11-222ENST00000560435 ABHD14A-ACY1A0A1B0GW23 586 aa2.25□□□□□ -2.05
SPG11-222ENST00000560435 A0A1W2PPR1 153 aa2.25□□□□□ -2.05
SPG11-222ENST00000560435 B9A039 149 aa2.25□□□□□ -2.05
SPG11-222ENST00000560435 PLK4O00444 970 aa2.25□□□□□ -2.05
SPG11-222ENST00000560435 TSPAN3O60637 253 aa2.25□□□□□ -2.05
SPG11-222ENST00000560435 WISP2O76076 250 aa2.25□□□□□ -2.05
SPG11-222ENST00000560435 CSPG5O95196 566 aa2.25□□□□□ -2.05
SPG11-222ENST00000560435 KRT18P05783 430 aaKnown RBP2.25□□□□□ -2.05
SPG11-222ENST00000560435 MYL1P05976 194 aa2.25□□□□□ -2.05
SPG11-222ENST00000560435 EPHA2P29317 976 aa2.25□□□□□ -2.05
SPG11-222ENST00000560435 HOXC9P31274 260 aa2.25□□□□□ -2.05
SPG11-222ENST00000560435 ELAVL2Q12926 359 aaKnown RBP2.25□□□□□ -2.05
SPG11-222ENST00000560435 TEAD2Q15562 447 aa2.25□□□□□ -2.05
SPG11-222ENST00000560435 C6orf141Q5SZD1 244 aa2.25□□□□□ -2.05
SPG11-222ENST00000560435 IL27RAQ6UWB1 636 aa2.25□□□□□ -2.05
SPG11-222ENST00000560435 ATG9AQ7Z3C6 839 aa2.25□□□□□ -2.05
SPG11-222ENST00000560435 HPS6Q86YV9 775 aa2.25□□□□□ -2.05
SPG11-222ENST00000560435 FGFRL1Q8N441 504 aa2.25□□□□□ -2.05
SPG11-222ENST00000560435 OR2T12Q8NG77 320 aa2.25□□□□□ -2.05
SPG11-222ENST00000560435 RILPL2Q969X0 211 aa2.25□□□□□ -2.05
SPG11-222ENST00000560435 ELP4Q96EB1 424 aa2.25□□□□□ -2.05
SPG11-222ENST00000560435 SLC47A1Q96FL8 570 aa2.25□□□□□ -2.05
SPG11-222ENST00000560435 H2AFJQ9BTM1 129 aa2.25□□□□□ -2.05
SPG11-222ENST00000560435 PHF7Q9BWX1 381 aaPredicted RBP2.25□□□□□ -2.05
SPG11-222ENST00000560435 RTN4RQ9BZR6 473 aa2.25□□□□□ -2.05
SPG11-222ENST00000560435 ARNT2Q9HBZ2 717 aa2.25□□□□□ -2.05
SPG11-222ENST00000560435 LRWD1Q9UFC0 647 aa2.25□□□□□ -2.05
SPG11-222ENST00000560435 IGHV4-61A0A0C4DH41 118 aa2.24□□□□□ -2.05
SPG11-222ENST00000560435 KPNA7A9QM74 516 aa2.24□□□□□ -2.05
SPG11-222ENST00000560435 IFNL4K9M1U5 179 aa2.24□□□□□ -2.05
SPG11-222ENST00000560435 NBNO60934 754 aa2.24□□□□□ -2.05
SPG11-222ENST00000560435 IGHV4-59P01825 116 aa2.24□□□□□ -2.05
SPG11-222ENST00000560435 URODP06132 367 aa2.24□□□□□ -2.05
SPG11-222ENST00000560435 LIPFP07098 398 aa2.24□□□□□ -2.05
SPG11-222ENST00000560435 SERPINB3P29508 390 aa2.24□□□□□ -2.05
SPG11-222ENST00000560435 SP3Q02447 781 aa2.24□□□□□ -2.05
SPG11-222ENST00000560435 ADCK5Q3MIX3 580 aa2.24□□□□□ -2.05
SPG11-222ENST00000560435 RNF212Q495C1 297 aa2.24□□□□□ -2.05
SPG11-222ENST00000560435 TOGARAM2Q6ZUX3 1019 aa2.24□□□□□ -2.05
SPG11-222ENST00000560435 Q6ZVH6 145 aa2.24□□□□□ -2.05
SPG11-222ENST00000560435 DPPA4Q7L190 304 aa2.24□□□□□ -2.05
SPG11-222ENST00000560435 MOGAT3Q86VF5 341 aa2.24□□□□□ -2.05
SPG11-222ENST00000560435 GBGT1Q8N5D6 347 aa2.24□□□□□ -2.05
SPG11-222ENST00000560435 PRSS33Q8NF86 280 aa2.24□□□□□ -2.05
SPG11-222ENST00000560435 TMEM143Q96AN5 459 aa2.24□□□□□ -2.05
SPG11-222ENST00000560435 PABPC5Q96DU9 382 aaKnown RBP2.24□□□□□ -2.05
SPG11-222ENST00000560435 MAGED4Q96JG8 741 aa2.24□□□□□ -2.05
SPG11-222ENST00000560435 NSMCE3Q96MG7 304 aa2.24□□□□□ -2.05
SPG11-222ENST00000560435 PCGF1Q9BSM1 259 aa2.24□□□□□ -2.05
SPG11-222ENST00000560435 RPP25Q9BUL9 199 aaKnown RBP2.24□□□□□ -2.05
SPG11-222ENST00000560435 USP44Q9H0E7 712 aa2.24□□□□□ -2.05
SPG11-222ENST00000560435 SLC25A18Q9H1K4 315 aa2.24□□□□□ -2.05
SPG11-222ENST00000560435 ZDHHC2Q9UIJ5 367 aa2.24□□□□□ -2.05
SPG11-222ENST00000560435 A4GNTQ9UNA3 340 aa2.24□□□□□ -2.05
SPG11-222ENST00000560435 RABGAP1Q9Y3P9 1069 aa2.24□□□□□ -2.05
SPG11-222ENST00000560435 SCINQ9Y6U3 715 aa2.24□□□□□ -2.05
SPG11-222ENST00000560435 IGHV3OR16-10A0A075B7F0 116 aa2.23□□□□□ -2.05
SPG11-222ENST00000560435 MEX3AA1L020 520 aaKnown RBP2.23□□□□□ -2.05
SPG11-222ENST00000560435 EPM2AB3EWF7 344 aa2.23□□□□□ -2.05
SPG11-222ENST00000560435 M0QZ24 198 aa2.23□□□□□ -2.05
SPG11-222ENST00000560435 MLYCDO95822 493 aa2.23□□□□□ -2.05
SPG11-222ENST00000560435 ACADMP11310 421 aa2.23□□□□□ -2.05
SPG11-222ENST00000560435 ITIH1P19827 911 aa2.23□□□□□ -2.05
SPG11-222ENST00000560435 UBA1P22314 1058 aaKnown RBP2.23□□□□□ -2.05
SPG11-222ENST00000560435 HNRNPDQ14103 355 aaKnown RBP2.23□□□□□ -2.05
SPG11-222ENST00000560435 RAB6CQ53S08 254 aa2.23□□□□□ -2.05
SPG11-222ENST00000560435 FAM166AQ6J272 317 aa2.23□□□□□ -2.05
SPG11-222ENST00000560435 PSRC1Q6PGN9 363 aaPredicted RBP2.23□□□□□ -2.05
SPG11-222ENST00000560435 FTSJ3Q8IY81 847 aaKnown RBP2.23□□□□□ -2.05
SPG11-222ENST00000560435 TMEM178AQ8NBL3 297 aa2.23□□□□□ -2.05
SPG11-222ENST00000560435 UTP15Q8TED0 518 aaKnown RBP2.23□□□□□ -2.05
SPG11-222ENST00000560435 ACOX2Q99424 681 aa2.23□□□□□ -2.05
SPG11-222ENST00000560435 TMEM47Q9BQJ4 181 aa2.23□□□□□ -2.05
SPG11-222ENST00000560435 GLIS2Q9BZE0 524 aaPredicted RBP2.23□□□□□ -2.05
SPG11-222ENST00000560435 RAB6CQ9H0N0 254 aa2.23□□□□□ -2.05
SPG11-222ENST00000560435 P2RY12Q9H244 342 aa2.23□□□□□ -2.05
SPG11-222ENST00000560435 RNF186Q9NXI6 227 aa2.23□□□□□ -2.05
SPG11-222ENST00000560435 PTTG2Q9NZH5 202 aa2.23□□□□□ -2.05
SPG11-222ENST00000560435 PRAG1Q86YV5 1406 aa2.23□□□□□ -2.05
SPG11-222ENST00000560435 C15orf62A8K5M9 175 aa2.22□□□□□ -2.05
SPG11-222ENST00000560435 GPR137BO60478 399 aa2.22□□□□□ -2.05
SPG11-222ENST00000560435 IGHV3-13P01766 116 aa2.22□□□□□ -2.05
SPG11-222ENST00000560435 KRT19P08727 400 aa2.22□□□□□ -2.05
SPG11-222ENST00000560435 P2RY6Q15077 328 aa2.22□□□□□ -2.05
SPG11-222ENST00000560435 NECTIN1Q15223 517 aa2.22□□□□□ -2.05
SPG11-222ENST00000560435 SGSM1Q2NKQ1 1148 aa2.22□□□□□ -2.05
SPG11-222ENST00000560435 WDR45BQ5MNZ6 344 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms