RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 CLMPQ9H6B4 373 aa13.44□□□□□ -0.26
SMAD3-214ENST00000560402 VIPAS39Q9H9C1 493 aa13.44□□□□□ -0.26
SMAD3-214ENST00000560402 PCDH9Q9HC56 1237 aa13.44□□□□□ -0.26
SMAD3-214ENST00000560402 SARS2Q9NP81 518 aaKnown RBP13.44□□□□□ -0.26
SMAD3-214ENST00000560402 FAM114A2Q9NRY5 505 aa13.44□□□□□ -0.26
SMAD3-214ENST00000560402 STARD5Q9NSY2 213 aa13.44□□□□□ -0.26
SMAD3-214ENST00000560402 RBM22Q9NW64 420 aaKnown RBP eCLIP13.44□□□□□ -0.264e-8■■■■□ 23.7
SMAD3-214ENST00000560402 DDX56Q9NY93 547 aaKnown RBP13.44□□□□□ -0.26
SMAD3-214ENST00000560402 PKD2L2Q9NZM6 624 aa13.44□□□□□ -0.26
SMAD3-214ENST00000560402 PDP2Q9P2J9 529 aa13.44□□□□□ -0.26
SMAD3-214ENST00000560402 FEZ2Q9UHY8 353 aaPredicted RBP13.44□□□□□ -0.26
SMAD3-214ENST00000560402 CHKBQ9Y259 395 aa13.44□□□□□ -0.26
SMAD3-214ENST00000560402 TMEM98Q9Y2Y6 226 aa13.44□□□□□ -0.26
SMAD3-214ENST00000560402 ZNF106Q9H2Y7 1883 aaKnown RBP13.44□□□□□ -0.26
SMAD3-214ENST00000560402 C1orf232A0A0U1RR37 186 aa13.43□□□□□ -0.26
SMAD3-214ENST00000560402 ZNF487B1APH4 448 aa13.43□□□□□ -0.26
SMAD3-214ENST00000560402 AGRPO00253 132 aa13.43□□□□□ -0.26
SMAD3-214ENST00000560402 DNAJC6O75061 913 aa13.43□□□□□ -0.26
SMAD3-214ENST00000560402 PPFIA2O75334 1257 aa13.43□□□□□ -0.26
SMAD3-214ENST00000560402 SEC31AO94979 1220 aaKnown RBP13.43□□□□□ -0.26
SMAD3-214ENST00000560402 HLA-DQB2P05538 268 aa13.43□□□□□ -0.26
SMAD3-214ENST00000560402 FGF3P11487 239 aaPredicted RBP13.43□□□□□ -0.26
SMAD3-214ENST00000560402 GJC1P36383 396 aa13.43□□□□□ -0.26
SMAD3-214ENST00000560402 GUCY2DQ02846 1103 aa13.43□□□□□ -0.26
SMAD3-214ENST00000560402 HHEXQ03014 270 aa13.43□□□□□ -0.26
SMAD3-214ENST00000560402 NFATC3Q12968 1075 aa13.43□□□□□ -0.26
SMAD3-214ENST00000560402 PTPRRQ15256 657 aa13.43□□□□□ -0.26
SMAD3-214ENST00000560402 WDR74Q6RFH5 385 aaPredicted RBP13.43□□□□□ -0.26
SMAD3-214ENST00000560402 RFLNAQ6ZTI6 216 aa13.43□□□□□ -0.26
SMAD3-214ENST00000560402 MARK2Q7KZI7 788 aaKnown RBP13.43□□□□□ -0.26
SMAD3-214ENST00000560402 PRICKLE2Q7Z3G6 844 aa13.43□□□□□ -0.26
SMAD3-214ENST00000560402 VSIG1Q86XK7 387 aa13.43□□□□□ -0.26
SMAD3-214ENST00000560402 SLC13A5Q86YT5 568 aaPredicted RBP13.43□□□□□ -0.26
SMAD3-214ENST00000560402 CCDC50Q8IVM0 306 aa13.43□□□□□ -0.26
SMAD3-214ENST00000560402 CCDC13Q8IYE1 715 aa13.43□□□□□ -0.26
SMAD3-214ENST00000560402 KATNAL2Q8IYT4 538 aa13.43□□□□□ -0.26
SMAD3-214ENST00000560402 LPCAT1Q8NF37 534 aa13.43□□□□□ -0.26
SMAD3-214ENST00000560402 ARRDC2Q8TBH0 407 aa13.43□□□□□ -0.26
SMAD3-214ENST00000560402 CCHCR1Q8TD31 782 aa13.43□□□□□ -0.26
SMAD3-214ENST00000560402 ALG3Q92685 438 aa13.43□□□□□ -0.26
SMAD3-214ENST00000560402 KRT35Q92764 455 aa13.43□□□□□ -0.26
SMAD3-214ENST00000560402 ART4Q93070 314 aa13.43□□□□□ -0.26
SMAD3-214ENST00000560402 NKD1Q969G9 470 aa13.43□□□□□ -0.26
SMAD3-214ENST00000560402 ADNPQ9H2P0 1102 aa13.43□□□□□ -0.26
SMAD3-214ENST00000560402 KIR2DS5A0A0G2JLQ3 304 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 A0A0G2JNG1 304 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 OR5K4A6NMS3 321 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 GPR89AB7ZAQ6 455 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 KIR2DS3K7RE56 304 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 INPP4BO15327 924 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 CAPN5O15484 640 aaPredicted RBP13.42□□□□□ -0.26
SMAD3-214ENST00000560402 MAP3K6O95382 1288 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 WISP1O95388 367 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 CLDN7O95471 211 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 PRLP01236 227 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 GPR89BP0CG08 455 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 SPINT3P49223 89 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 FNTAP49354 379 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 ARSDP51689 593 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 DCDC1P59894 354 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 COPS2P61201 443 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 DR1Q01658 176 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 KIR2DS5Q14953 304 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 TBR1Q16650 682 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 DCAF12Q5T6F0 453 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 NKAIN2Q5VXU1 208 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 SLC9B2Q86UD5 537 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 FAM129CQ86XR2 697 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 RCOR2Q8IZ40 523 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 IL22RA1Q8N6P7 574 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 GRK7Q8WTQ7 553 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 PKNOX2Q96KN3 472 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 AGAP2Q99490 1192 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 ZPBPQ9BS86 351 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 MLPHQ9BV36 600 aaPredicted RBP13.42□□□□□ -0.26
SMAD3-214ENST00000560402 ADGRE3Q9BY15 652 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.42□□□□□ -0.26
SMAD3-214ENST00000560402 FAM129AQ9BZQ8 928 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 FAM83DQ9H4H8 585 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 RAD18Q9NS91 495 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 ZNF446Q9NWS9 450 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 SLC39A1Q9NY26 324 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 NFKBIL1Q9UBC1 381 aaPredicted RBP13.42□□□□□ -0.26
SMAD3-214ENST00000560402 PLEKHM1Q9Y4G2 1056 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 B3GALT1Q9Y5Z6 326 aa13.42□□□□□ -0.26
SMAD3-214ENST00000560402 A0A0U1RQS6 177 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 LILRA5A6NI73 299 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 EFCAB7A8K855 629 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 RAD51CO43502 376 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 RAD1O60671 282 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 F3P13726 295 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 WT1P19544 449 aaPredicted RBP13.41□□□□□ -0.26
SMAD3-214ENST00000560402 UGT1A3P35503 534 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 PPM1FP49593 454 aaPredicted RBP13.41□□□□□ -0.26
SMAD3-214ENST00000560402 CLCNKAP51800 687 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 IFI35P80217 286 aaPredicted RBP13.41□□□□□ -0.26
SMAD3-214ENST00000560402 SLC7A5Q01650 507 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 KCNC4Q03721 635 aa13.41□□□□□ -0.26
SMAD3-214ENST00000560402 PPIDQ08752 370 aaKnown RBP13.41□□□□□ -0.26
SMAD3-214ENST00000560402 NIPAL4Q0D2K0 466 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms