RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 CPNE6O95741 557 aa11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 ETS1P14921 441 aa11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 ZNF7P17097 686 aaPredicted RBP11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 CCKBRP32239 447 aa11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 ACTN2P35609 894 aa11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 GPR3P46089 330 aa11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 FASLGP48023 281 aa11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 ZNF140P52738 457 aaPredicted RBP11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 TMPRSS15P98073 1019 aa11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 XIAPP98170 497 aa11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 CCDC173Q0VFZ6 552 aa11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 PEX6Q13608 980 aa11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 C16orf72Q14CZ0 275 aa11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 INSCQ1MX18 579 aa11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 MAP9Q49MG5 647 aa11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 PHF19Q5T6S3 580 aa11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 GPRC6AQ5T6X5 926 aa11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 ZDHHC20Q5W0Z9 365 aa11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 RAB11FIP2Q7L804 512 aa11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 LRRTM4Q86VH4 590 aa11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 GLIS1Q8NBF1 620 aa11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 WDR36Q8NI36 951 aaKnown RBP11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 ZNF398Q8TD17 642 aa11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 DTX3LQ8TDB6 740 aa11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 BRSK1Q8TDC3 778 aa11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 RTP4Q96DX8 246 aa11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 LIN37Q96GY3 246 aaPredicted RBP11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 FAM96AQ9H5X1 160 aa11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 TMEM9Q9P0T7 183 aa11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 LHX6Q9UPM6 363 aa11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 PCDHGA8Q9Y5G5 932 aa11.48□□□□□ -0.57
RABGGTA-216ENST00000560243 PRAMEF33A0A0G2JMD5 474 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 IGHV5-10-1A0A0J9YXX1 117 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 GPR89AB7ZAQ6 455 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 PLD2O14939 933 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 KMOO15229 486 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 LDB2O43679 373 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 PPFIA2O75334 1257 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 ZSCAN5DPP0CG00 497 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 GPR89BP0CG08 455 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 F3P13726 295 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 BRAFP15056 766 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 ITIH1P19827 911 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 MPSTP25325 297 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 RPL10P27635 214 aaKnown RBP11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 RBMS1P29558 406 aaKnown RBP11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 CXCR5P32302 372 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 ETV5P41161 510 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 CLCNKAP51800 687 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 DRG2P55039 364 aaKnown RBP11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 HHEXQ03014 270 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 SEPT7Q16181 437 aaKnown RBP11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 IGF2-ASQ6U949 168 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 DET1Q7L5Y6 550 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 PIM3Q86V86 326 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 TRAPPC5Q8IUR0 188 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 LSMEM2Q8N112 164 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 FBXO39Q8N4B4 442 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 RCBTB1Q8NDN9 531 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 DDHD1Q8NEL9 900 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 DNAJC1Q96KC8 554 aaKnown RBP11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 ZNF578Q96N58 590 aaPredicted RBP11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 TMEM74Q96NL1 305 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 ALS2CR12Q96Q35 445 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 TIMM29Q9BSF4 260 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 STRADBQ9C0K7 418 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 SARS2Q9NP81 518 aaKnown RBP11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 SMOXQ9NWM0 555 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 KCNK4Q9NYG8 393 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 ZNF624Q9P2J8 865 aaPredicted RBP11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 CPNE7Q9UBL6 633 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 ZNF148Q9UQR1 794 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 CACNA1GO43497 2377 aa11.47□□□□□ -0.57
RABGGTA-216ENST00000560243 CCDC78A2IDD5 438 aa11.46□□□□□ -0.57
RABGGTA-216ENST00000560243 OR2AG2A6NM03 316 aa11.46□□□□□ -0.57
RABGGTA-216ENST00000560243 CDRT15L2A8MXV6 281 aa11.46□□□□□ -0.57
RABGGTA-216ENST00000560243 ZNF189O75820 626 aaPredicted RBP11.46□□□□□ -0.57
RABGGTA-216ENST00000560243 SRP72O76094 671 aaKnown RBP11.46□□□□□ -0.57
RABGGTA-216ENST00000560243 CRTAMO95727 393 aa11.46□□□□□ -0.57
RABGGTA-216ENST00000560243 AP2A1O95782 977 aa11.46□□□□□ -0.57
RABGGTA-216ENST00000560243 IFNB1P01574 187 aa11.46□□□□□ -0.57
RABGGTA-216ENST00000560243 PRSS56P0CW18 603 aa11.46□□□□□ -0.57
RABGGTA-216ENST00000560243 SLC19A1P41440 591 aa11.46□□□□□ -0.57
RABGGTA-216ENST00000560243 GRIA1P42261 906 aa11.46□□□□□ -0.57
RABGGTA-216ENST00000560243 CDKN1CP49918 316 aaPredicted RBP11.46□□□□□ -0.57
RABGGTA-216ENST00000560243 ERVPABLB-1P60509 514 aa11.46□□□□□ -0.57
RABGGTA-216ENST00000560243 UBE2IP63279 158 aaKnown RBP11.46□□□□□ -0.57
RABGGTA-216ENST00000560243 ITGA9Q13797 1035 aa11.46□□□□□ -0.57
RABGGTA-216ENST00000560243 GTF2H3Q13889 308 aa11.46□□□□□ -0.57
RABGGTA-216ENST00000560243 POU6F1Q14863 301 aa11.46□□□□□ -0.57
RABGGTA-216ENST00000560243 P3H1Q32P28 736 aa11.46□□□□□ -0.57
RABGGTA-216ENST00000560243 LDLRAP1Q5SW96 308 aa11.46□□□□□ -0.57
RABGGTA-216ENST00000560243 TMEM220Q6QAJ8 160 aa11.46□□□□□ -0.57
RABGGTA-216ENST00000560243 FAM83HQ6ZRV2 1179 aaPredicted RBP11.46□□□□□ -0.57
RABGGTA-216ENST00000560243 SPACA3Q8IXA5 215 aa11.46□□□□□ -0.57
RABGGTA-216ENST00000560243 BEND7Q8N7W2 519 aaPredicted RBP11.46□□□□□ -0.57
RABGGTA-216ENST00000560243 OR52K1Q8NGK4 314 aa11.46□□□□□ -0.57
RABGGTA-216ENST00000560243 SGF29Q96ES7 293 aa11.46□□□□□ -0.57
RABGGTA-216ENST00000560243 CCDC74BQ96LY2 380 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms