RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 CDKAL1Q5VV42 579 aa12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 IZUMO3Q5VZ72 239 aa12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 SP5Q6BEB4 398 aaPredicted RBP12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 IRGCQ6NXR0 463 aa12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 CAVIN1Q6NZI2 390 aaKnown RBP12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 CYB5D1Q6P9G0 228 aa12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 CERS6Q6ZMG9 384 aa12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 MON1BQ7L1V2 547 aa12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 TRIM48Q8IWZ4 208 aa12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 MCEMP1Q8IX19 187 aa12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 MR1Q95460 341 aa12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 ZDHHC12Q96GR4 267 aa12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 SLC41A2Q96JW4 573 aa12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 EIF3CQ99613 913 aaKnown RBP12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 BARD1Q99728 777 aaKnown RBP12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 SNRNP25Q9BV90 132 aaKnown RBP12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 GANQ9H2C0 597 aa12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 OSGEPL1Q9H4B0 414 aa12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 GPR83Q9NYM4 423 aa12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 ATXN10Q9UBB4 475 aa12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 EPHA6Q9UF33 1036 aa12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 SLC23A2Q9UGH3 650 aa12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 G3BP2Q9UN86 482 aaKnown RBP12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 CACNA1CQ13936 2221 aa12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 NUP210LQ5VU65 1888 aa12.59□□□□□ -0.39
RABGGTA-213ENST00000560127 ANKHD1Q8IWZ3 2542 aaKnown RBP12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 ANKRD62A6NC57 917 aa12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 CLDN7O95471 211 aa12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 EBLN1P0CF75 366 aa12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 SOX5P35711 763 aa12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 JAM2P57087 298 aa12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 TYRO3Q06418 890 aa12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 RAPSNQ13702 412 aa12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 DPYSQ14117 519 aa12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 ELOAQ14241 798 aaKnown RBP12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 GPR18Q14330 331 aa12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 IHHQ14623 411 aa12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 PPP6R3Q5H9R7 873 aaPredicted RBP12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 ZNF648Q5T619 568 aaPredicted RBP12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 ERMARDQ5T6L9 678 aa12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 HENMT1Q5T8I9 393 aaKnown RBP12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 LCN10Q6JVE6 187 aa12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 CYP4V2Q6ZWL3 525 aaPredicted RBP12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 BPHLQ86WA6 291 aaPredicted RBP12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 NDUFAF2Q8N183 169 aa12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 ARFGAP1Q8N6T3 406 aa12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 SIDT2Q8NBJ9 832 aaKnown RBP12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 SLC38A9Q8NBW4 561 aa12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 RAB33BQ9H082 229 aa12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 CARD9Q9H257 536 aa12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 CHST8Q9H2A9 424 aa12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 SLC40A1Q9NP59 571 aa12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 ARFGAP3Q9NP61 516 aa12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 WASH6PQ9NQA3 447 aa12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 FAM207AQ9NSI2 230 aaPredicted RBP12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 PCSK1NQ9UHG2 260 aa12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 B3GNT3Q9Y2A9 372 aa12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 NTNG1Q9Y2I2 539 aa12.58□□□□□ -0.4
RABGGTA-213ENST00000560127 MAFKO60675 156 aa12.57□□□□□ -0.4
RABGGTA-213ENST00000560127 CPNE3O75131 537 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-213ENST00000560127 BRAFP15056 766 aa12.57□□□□□ -0.4
RABGGTA-213ENST00000560127 MMP13P45452 471 aa12.57□□□□□ -0.4
RABGGTA-213ENST00000560127 PDE1BQ01064 536 aa12.57□□□□□ -0.4
RABGGTA-213ENST00000560127 ACY1Q03154 408 aa12.57□□□□□ -0.4
RABGGTA-213ENST00000560127 ZRSR2Q15696 482 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-213ENST00000560127 SEPT7Q16181 437 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-213ENST00000560127 STX1AQ16623 288 aa12.57□□□□□ -0.4
RABGGTA-213ENST00000560127 TPD52L1Q16890 204 aaPredicted RBP12.57□□□□□ -0.4
RABGGTA-213ENST00000560127 KRTAP21-3Q3LHN1 58 aa12.57□□□□□ -0.4
RABGGTA-213ENST00000560127 PLA2G4EQ3MJ16 856 aa12.57□□□□□ -0.4
RABGGTA-213ENST00000560127 DCUN1D2Q6PH85 259 aa12.57□□□□□ -0.4
RABGGTA-213ENST00000560127 RAVER1Q8IY67 606 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-213ENST00000560127 ZBTB2Q8N680 514 aa12.57□□□□□ -0.4
RABGGTA-213ENST00000560127 ENDOVQ8N8Q3 282 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-213ENST00000560127 TMEM102Q8N9M5 508 aaPredicted RBP12.57□□□□□ -0.4
RABGGTA-213ENST00000560127 ENOX1Q8TC92 643 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-213ENST00000560127 UBXN4Q92575 508 aa12.57□□□□□ -0.4
RABGGTA-213ENST00000560127 INPP5DQ92835 1189 aa12.57□□□□□ -0.4
RABGGTA-213ENST00000560127 ZNF514Q96K75 400 aaPredicted RBP12.57□□□□□ -0.4
RABGGTA-213ENST00000560127 OR2AG1Q9H205 316 aa12.57□□□□□ -0.4
RABGGTA-213ENST00000560127 FGF21Q9NSA1 209 aa12.57□□□□□ -0.4
RABGGTA-213ENST00000560127 POT1Q9NUX5 634 aa12.57□□□□□ -0.4
RABGGTA-213ENST00000560127 CWC15Q9P013 229 aaKnown RBP12.57□□□□□ -0.4
RABGGTA-213ENST00000560127 C5AR2Q9P296 337 aa12.57□□□□□ -0.4
RABGGTA-213ENST00000560127 SNX7Q9UNH6 387 aa12.57□□□□□ -0.4
RABGGTA-213ENST00000560127 DNHD1Q96M86 4753 aa12.56□□□□□ -0.4
RABGGTA-213ENST00000560127 OR52A4PA6NMU1 304 aa12.56□□□□□ -0.4
RABGGTA-213ENST00000560127 F5H423 210 aaPredicted RBP12.56□□□□□ -0.4
RABGGTA-213ENST00000560127 PES1O00541 588 aaKnown RBP12.56□□□□□ -0.4
RABGGTA-213ENST00000560127 JCHAINP01591 159 aa12.56□□□□□ -0.4
RABGGTA-213ENST00000560127 HCAR3P49019 387 aa12.56□□□□□ -0.4
RABGGTA-213ENST00000560127 SPINT3P49223 89 aa12.56□□□□□ -0.4
RABGGTA-213ENST00000560127 KLK7P49862 253 aa12.56□□□□□ -0.4
RABGGTA-213ENST00000560127 VAV2P52735 878 aa12.56□□□□□ -0.4
RABGGTA-213ENST00000560127 CT47A1Q5JQC4 288 aaPredicted RBP12.56□□□□□ -0.4
RABGGTA-213ENST00000560127 VWA5B1Q5TIE3 1220 aa12.56□□□□□ -0.4
RABGGTA-213ENST00000560127 CRTC3Q6UUV7 619 aa12.56□□□□□ -0.4
RABGGTA-213ENST00000560127 ABRAXAS1Q6UWZ7 409 aa12.56□□□□□ -0.4
RABGGTA-213ENST00000560127 MED25Q71SY5 747 aa12.56□□□□□ -0.4
RABGGTA-213ENST00000560127 APTXQ7Z2E3 356 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms