RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 CCDC97Q96F63 343 aaPredicted RBP16.61■□□□□ 0.25
RPL28-209ENST00000560055 TRIM51Q9BSJ1 452 aa16.61■□□□□ 0.25
RPL28-209ENST00000560055 FAM96AQ9H5X1 160 aa16.61■□□□□ 0.25
RPL28-209ENST00000560055 SPATS2LQ9NUQ6 558 aaKnown RBP16.61■□□□□ 0.25
RPL28-209ENST00000560055 CRLS1Q9UJA2 301 aa16.61■□□□□ 0.25
RPL28-209ENST00000560055 SOX13Q9UN79 622 aa16.61■□□□□ 0.25
RPL28-209ENST00000560055 GPR34Q9UPC5 381 aa16.61■□□□□ 0.25
RPL28-209ENST00000560055 AKAP13Q12802 2813 aa16.6■□□□□ 0.25
RPL28-209ENST00000560055 OR51F1A6NGY5 319 aa16.6■□□□□ 0.25
RPL28-209ENST00000560055 GOLGA8MH3BSY2 632 aa16.6■□□□□ 0.25
RPL28-209ENST00000560055 KMOO15229 486 aa16.6■□□□□ 0.25
RPL28-209ENST00000560055 SGTAO43765 313 aa16.6■□□□□ 0.25
RPL28-209ENST00000560055 NOBOXO60393 691 aa16.6■□□□□ 0.25
RPL28-209ENST00000560055 URI1O94763 535 aaPredicted RBP16.6■□□□□ 0.25
RPL28-209ENST00000560055 MYF5P13349 255 aa16.6■□□□□ 0.25
RPL28-209ENST00000560055 ACP5P13686 325 aa16.6■□□□□ 0.25
RPL28-209ENST00000560055 ACRV1P26436 265 aa16.6■□□□□ 0.25
RPL28-209ENST00000560055 CLCNKAP51800 687 aa16.6■□□□□ 0.25
RPL28-209ENST00000560055 CTSCP53634 463 aa16.6■□□□□ 0.25
RPL28-209ENST00000560055 MORF4L2Q15014 288 aa16.6■□□□□ 0.25
RPL28-209ENST00000560055 ZRANB3Q5FWF4 1079 aa16.6■□□□□ 0.25
RPL28-209ENST00000560055 IZUMO3Q5VZ72 239 aa16.6■□□□□ 0.25
RPL28-209ENST00000560055 SLC30A9Q6PML9 568 aa16.6■□□□□ 0.25
RPL28-209ENST00000560055 AFTPHQ6ULP2 937 aa16.6■□□□□ 0.25
RPL28-209ENST00000560055 CHST15Q7LFX5 561 aaPredicted RBP16.6■□□□□ 0.25
RPL28-209ENST00000560055 C17orf82Q86X59 251 aaPredicted RBP16.6■□□□□ 0.25
RPL28-209ENST00000560055 SFTPA2Q8IWL1 248 aa16.6■□□□□ 0.25
RPL28-209ENST00000560055 GLMNQ92990 594 aa16.6■□□□□ 0.25
RPL28-209ENST00000560055 TIMM29Q9BSF4 260 aa16.6■□□□□ 0.25
RPL28-209ENST00000560055 SLC23A2Q9UGH3 650 aa16.6■□□□□ 0.25
RPL28-209ENST00000560055 ANGPTL2Q9UKU9 493 aa16.6■□□□□ 0.25
RPL28-209ENST00000560055 ASXL3Q9C0F0 2248 aa16.6■□□□□ 0.25
RPL28-209ENST00000560055 EME2A4GXA9 379 aaPredicted RBP16.59■□□□□ 0.25
RPL28-209ENST00000560055 A6NCN8 305 aa16.59■□□□□ 0.25
RPL28-209ENST00000560055 FAM187AA6NFU0 413 aa16.59■□□□□ 0.25
RPL28-209ENST00000560055 RAD51CO43502 376 aa16.59■□□□□ 0.25
RPL28-209ENST00000560055 SEC31AO94979 1220 aaKnown RBP16.59■□□□□ 0.25
RPL28-209ENST00000560055 TOP3BO95985 862 aaKnown RBP16.59■□□□□ 0.25
RPL28-209ENST00000560055 GOT2P00505 430 aaKnown RBP16.59■□□□□ 0.25
RPL28-209ENST00000560055 MSH3P20585 1137 aa16.59■□□□□ 0.25
RPL28-209ENST00000560055 ARNTP27540 789 aa16.59■□□□□ 0.25
RPL28-209ENST00000560055 NMBRP28336 390 aa16.59■□□□□ 0.25
RPL28-209ENST00000560055 AKT1P31749 480 aa16.59■□□□□ 0.25
RPL28-209ENST00000560055 ACTR1BP42025 376 aa16.59■□□□□ 0.25
RPL28-209ENST00000560055 ACTR1AP61163 376 aa16.59■□□□□ 0.25
RPL28-209ENST00000560055 DAB2P98082 770 aa16.59■□□□□ 0.25
RPL28-209ENST00000560055 CKAP4Q07065 602 aaKnown RBP16.59■□□□□ 0.25
RPL28-209ENST00000560055 ILKQ13418 452 aa16.59■□□□□ 0.25
RPL28-209ENST00000560055 GTF2H3Q13889 308 aa16.59■□□□□ 0.25
RPL28-209ENST00000560055 NR0B2Q15466 257 aa16.59■□□□□ 0.25
RPL28-209ENST00000560055 WHAMMP3Q1A5X7 153 aa16.59■□□□□ 0.25
RPL28-209ENST00000560055 HIBCHQ6NVY1 386 aaPredicted RBP16.59■□□□□ 0.25
RPL28-209ENST00000560055 CRTC3Q6UUV7 619 aa16.59■□□□□ 0.25
RPL28-209ENST00000560055 SERPINA9Q86WD7 417 aa16.59■□□□□ 0.25
RPL28-209ENST00000560055 TRAPPC5Q8IUR0 188 aa16.59■□□□□ 0.25
RPL28-209ENST00000560055 HEXDCQ8WVB3 486 aa16.59■□□□□ 0.25
RPL28-209ENST00000560055 ZNF592Q92610 1267 aa16.59■□□□□ 0.25
RPL28-209ENST00000560055 MFSD3Q96ES6 412 aa16.59■□□□□ 0.25
RPL28-209ENST00000560055 TTC25Q96NG3 672 aa16.59■□□□□ 0.25
RPL28-209ENST00000560055 COPS8Q99627 209 aa16.59■□□□□ 0.25
RPL28-209ENST00000560055 DPEP2Q9H4A9 486 aa16.59■□□□□ 0.25
RPL28-209ENST00000560055 ZDHHC3Q9NYG2 299 aa16.59■□□□□ 0.25
RPL28-209ENST00000560055 SIRPGQ9P1W8 387 aa16.59■□□□□ 0.25
RPL28-209ENST00000560055 APOBEC2Q9Y235 224 aaKnown RBP16.59■□□□□ 0.25
RPL28-209ENST00000560055 MRFAP1Q9Y605 127 aa16.59■□□□□ 0.25
RPL28-209ENST00000560055 SDR42E2A6NKP2 422 aa16.58■□□□□ 0.24
RPL28-209ENST00000560055 B4DGG1 531 aa16.58■□□□□ 0.24
RPL28-209ENST00000560055 RFPL3O75679 317 aa16.58■□□□□ 0.24
RPL28-209ENST00000560055 GP1BAP07359 652 aa16.58■□□□□ 0.24
RPL28-209ENST00000560055 SPINK2P20155 84 aa16.58■□□□□ 0.24
RPL28-209ENST00000560055 RPIAP49247 311 aa16.58■□□□□ 0.24
RPL28-209ENST00000560055 DUSP3P51452 185 aaPredicted RBP16.58■□□□□ 0.24
RPL28-209ENST00000560055 PRAMEP78395 509 aa16.58■□□□□ 0.24
RPL28-209ENST00000560055 MRPS25P82663 173 aaKnown RBP16.58■□□□□ 0.24
RPL28-209ENST00000560055 HLTFQ14527 1009 aaKnown RBP eCLIP16.58■□□□□ 0.24
RPL28-209ENST00000560055 DBN1Q16643 649 aa16.58■□□□□ 0.24
RPL28-209ENST00000560055 BCL7AQ4VC05 210 aa16.58■□□□□ 0.24
RPL28-209ENST00000560055 GUSBP11Q6P575 273 aa16.58■□□□□ 0.24
RPL28-209ENST00000560055 TMEM220Q6QAJ8 160 aa16.58■□□□□ 0.24
RPL28-209ENST00000560055 MAATS1Q7Z4T9 603 aa16.58■□□□□ 0.24
RPL28-209ENST00000560055 NAGSQ8N159 534 aa16.58■□□□□ 0.24
RPL28-209ENST00000560055 PNPLA1Q8N8W4 532 aa16.58■□□□□ 0.24
RPL28-209ENST00000560055 OR4L1Q8NH43 312 aa16.58■□□□□ 0.24
RPL28-209ENST00000560055 ZDHHC1Q8WTX9 485 aa16.58■□□□□ 0.24
RPL28-209ENST00000560055 ADAMTS14Q8WXS8 1223 aa16.58■□□□□ 0.24
RPL28-209ENST00000560055 SGF29Q96ES7 293 aa16.58■□□□□ 0.24
RPL28-209ENST00000560055 SNF8Q96H20 258 aa16.58■□□□□ 0.24
RPL28-209ENST00000560055 ZNF514Q96K75 400 aaPredicted RBP16.58■□□□□ 0.24
RPL28-209ENST00000560055 SIGLEC10Q96LC7 697 aa16.58■□□□□ 0.24
RPL28-209ENST00000560055 EVA1BQ9NVM1 165 aa16.58■□□□□ 0.24
RPL28-209ENST00000560055 GULP1Q9UBP9 304 aa16.58■□□□□ 0.24
RPL28-209ENST00000560055 WASF3Q9UPY6 502 aa16.58■□□□□ 0.24
RPL28-209ENST00000560055 KCNK6Q9Y257 313 aa16.58■□□□□ 0.24
RPL28-209ENST00000560055 DNMT3AQ9Y6K1 912 aaPredicted RBP16.58■□□□□ 0.24
RPL28-209ENST00000560055 ZFC3H1O60293 1989 aaKnown RBP16.58■□□□□ 0.24
RPL28-209ENST00000560055 FAM237BA0A1B0GVD1 139 aa16.57■□□□□ 0.24
RPL28-209ENST00000560055 MAGEB16A2A368 324 aa16.57■□□□□ 0.24
RPL28-209ENST00000560055 OR2AG2A6NM03 316 aa16.57■□□□□ 0.24
RPL28-209ENST00000560055 EFCAB8A8MWE9 144 aa16.57■□□□□ 0.24
RPL28-209ENST00000560055 SMAPO00193 183 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms