RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 RAD51Q06609 339 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 CDK5R2Q13319 367 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 PEX6Q13608 980 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 BMPR2Q13873 1038 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 LRRC14Q15048 493 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 TAF1AQ15573 450 aaPredicted RBP5.19□□□□□ -1.58
SPG11-220ENST00000559933 CHRNA6Q15825 494 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 LONRF1Q17RB8 773 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 SKIDA1Q1XH10 827 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 KBTBD12Q3ZCT8 623 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 FBXO43Q4G163 708 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 ZRANB3Q5FWF4 1079 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 RALGPS1Q5JS13 557 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 KCTD16Q68DU8 428 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 ERAP2Q6P179 960 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 EMBQ6PCB8 327 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 BRAT1Q6PJG6 821 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 LAYNQ6UX15 382 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 SEZ6L2Q6UXD5 910 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 C3orf62Q6ZUJ4 267 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 Q6ZVL8 140 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 SYT13Q7L8C5 426 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 TRMT11Q7Z4G4 463 aaKnown RBP5.19□□□□□ -1.58
SPG11-220ENST00000559933 PTAR1Q7Z6K3 402 aaPredicted RBP5.19□□□□□ -1.58
SPG11-220ENST00000559933 PDZD3Q86UT5 571 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 TRIM74Q86UV6 250 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 KCNMB4Q86W47 210 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 PALM2Q8IXS6 379 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 PIANPQ8IYJ0 282 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 OTUD6BQ8N6M0 293 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 PLA2G15Q8NCC3 412 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 ACVR1CQ8NER5 493 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 OR14C36Q8NHC7 312 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 HDAC10Q969S8 669 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 SCRN2Q96FV2 425 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 CERS2Q96G23 380 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 PPP1R16AQ96I34 528 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 SHDQ96IW2 340 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 TBATAQ96M53 351 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 ZIM3Q96PE6 472 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 PPP1R2P1Q96PQ5 205 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 OMDQ99983 421 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 KIFC1Q9BW19 673 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 BOCQ9BWV1 1114 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 PPANQ9NQ55 473 aaKnown RBP5.19□□□□□ -1.58
SPG11-220ENST00000559933 DYRK4Q9NR20 520 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 FBXO6Q9NRD1 293 aaPredicted RBP5.19□□□□□ -1.58
SPG11-220ENST00000559933 C20orf96Q9NUD7 363 aaPredicted RBP5.19□□□□□ -1.58
SPG11-220ENST00000559933 SPATA6Q9NWH7 488 aaPredicted RBP5.19□□□□□ -1.58
SPG11-220ENST00000559933 IL17CQ9P0M4 197 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 DKK3Q9UBP4 350 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 PHTF1Q9UMS5 762 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 SLC5A6Q9Y289 635 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 MRPS17Q9Y2R5 130 aaKnown RBP5.19□□□□□ -1.58
SPG11-220ENST00000559933 SIT1Q9Y3P8 196 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 RNF114Q9Y508 228 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 DMDP11532 3685 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 KMT2EQ8IZD2 1858 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 IGHV1OR15-9A0A0B4J2B8 117 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 FAM237BA0A1B0GVD1 139 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 A0A1W2PQU0 124 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 FAM159BA6NKW6 160 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 FADS2P1A8MWK0 482 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 POC1B-GALNT4F8VUJ3 575 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 H0Y8X5 98 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 AGPSO00116 658 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 NEMP1O14524 444 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 WNT9AO14904 365 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 INPP4BO15327 924 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 EIF3HO15372 352 aaKnown RBP eCLIP5.18□□□□□ -1.58
SPG11-220ENST00000559933 STX7O15400 261 aaKnown RBP5.18□□□□□ -1.58
SPG11-220ENST00000559933 PLRG1O43660 514 aaKnown RBP5.18□□□□□ -1.58
SPG11-220ENST00000559933 OR1I1O60431 355 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 ERLIN1O75477 346 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 RECQL5O94762 991 aaPredicted RBP5.18□□□□□ -1.58
SPG11-220ENST00000559933 USP1O94782 785 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 PCDH8O95206 1070 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 PRAMEF1O95521 474 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 SOD1P00441 154 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 EPOP01588 193 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 POLBP06746 335 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 ACADMP11310 421 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 CYP2A6P11509 494 aaPredicted RBP5.18□□□□□ -1.58
SPG11-220ENST00000559933 ALADP13716 330 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 AOC1P19801 751 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 C5AR1P21730 350 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 LPOP22079 712 aaPredicted RBP5.18□□□□□ -1.58
SPG11-220ENST00000559933 MCM3P25205 808 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 GABRB3P28472 473 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 MC4RP32245 332 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 FOXN2P32314 431 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 FNTBP49356 437 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 TUBB4BP68371 445 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 ACVR1Q04771 509 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 ZNF844Q08AG5 666 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 CTBP1Q13363 440 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 ARHGEF7Q14155 803 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 CASP8Q14790 479 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 SLMAPQ14BN4 828 aa5.18□□□□□ -1.58
SPG11-220ENST00000559933 ACOX1Q15067 660 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms