RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 LCA5Q86VQ0 697 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 CAMKK1Q8N5S9 505 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 KLK6Q92876 244 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 DCUN1D1Q96GG9 259 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 C1QTNF1Q9BXJ1 281 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 C1QTNF7Q9BXJ2 289 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 GPAMQ9HCL2 828 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 MBNL1Q9NR56 388 aaKnown RBP12.05□□□□□ -0.48
HERC1-205ENST00000559886 PLLPQ9Y342 182 aa12.05□□□□□ -0.48
HERC1-205ENST00000559886 OAS3Q9Y6K5 1087 aaKnown RBP12.05□□□□□ -0.48
HERC1-205ENST00000559886 CFAP99D6REC4 459 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 ZNF217O75362 1048 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 MTX2O75431 263 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 VPS26AO75436 327 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 SEMA4FO95754 770 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 RALBP11234 206 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 CHN1P15882 459 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 MSH3P20585 1137 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 SLC26A3P40879 764 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 SKIV2L2P42285 1042 aaKnown RBP12.04□□□□□ -0.48
HERC1-205ENST00000559886 IRF4Q15306 451 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 CWF19L1Q69YN2 538 aaKnown RBP12.04□□□□□ -0.48
HERC1-205ENST00000559886 TMEM207Q6UWW9 146 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 CENPLQ8N0S6 344 aaPredicted RBP12.04□□□□□ -0.48
HERC1-205ENST00000559886 PLD6Q8N2A8 252 aaKnown RBP12.04□□□□□ -0.48
HERC1-205ENST00000559886 NAT14Q8WUY8 206 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 UBXN10Q96LJ8 280 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 GPR21Q99679 349 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 NKIRAS1Q9NYS0 192 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 DLGAP2Q9P1A6 1054 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 GALPQ9UBC7 116 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 GRID1Q9ULK0 1009 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 CYP8B1Q9UNU6 501 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 EML5Q05BV3 1969 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 IQCF5A8MTL0 148 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 E5RI56 91 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 DNAJC6O75061 913 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 AP2A2O94973 939 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 PDGFBP01127 241 aaPredicted RBP12.04□□□□□ -0.48
HERC1-205ENST00000559886 PCCBP05166 539 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 CHRM3P20309 590 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 MAT2AP31153 395 aaKnown RBP12.04□□□□□ -0.48
HERC1-205ENST00000559886 TRIM23P36406 574 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 CLCN7P51798 805 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 TMEM115Q12893 351 aaPredicted RBP12.04□□□□□ -0.48
HERC1-205ENST00000559886 PDAP1Q13442 181 aaKnown RBP12.04□□□□□ -0.48
HERC1-205ENST00000559886 ANKRD42Q8N9B4 389 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 FAM136AQ96C01 138 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 COX14Q96I36 57 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 HIC2Q96JB3 615 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 LENG8Q96PV6 779 aaPredicted RBP12.04□□□□□ -0.48
HERC1-205ENST00000559886 IQCGQ9H095 443 aaKnown RBP12.04□□□□□ -0.48
HERC1-205ENST00000559886 C12orf65Q9H3J6 166 aaKnown RBP12.04□□□□□ -0.48
HERC1-205ENST00000559886 WSB2Q9NYS7 404 aaPredicted RBP12.04□□□□□ -0.48
HERC1-205ENST00000559886 SLC17A7Q9P2U7 560 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 MBD1Q9UIS9 605 aaPredicted RBP12.04□□□□□ -0.48
HERC1-205ENST00000559886 CACNA1IQ9P0X4 2223 aa12.04□□□□□ -0.48
HERC1-205ENST00000559886 RAD51BO15315 384 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 LATO43561 262 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 DCXO43602 365 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 SGTAO43765 313 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 KLHL2O95198 593 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 OR56A5P0C7T3 313 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 ZNF37AP17032 561 aaPredicted RBP12.03□□□□□ -0.48
HERC1-205ENST00000559886 CD6P30203 668 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 CXCL12P48061 93 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 WDR4P57081 412 aaKnown RBP12.03□□□□□ -0.48
HERC1-205ENST00000559886 INPP5AQ14642 412 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 ZNF648Q5T619 568 aaPredicted RBP12.03□□□□□ -0.48
HERC1-205ENST00000559886 UGT3A1Q6NUS8 523 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 TBC1D1Q86TI0 1168 aaPredicted RBP12.03□□□□□ -0.48
HERC1-205ENST00000559886 TOE1Q96GM8 510 aaKnown RBP12.03□□□□□ -0.48
HERC1-205ENST00000559886 SLC30A3Q99726 388 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 TEX101Q9BY14 249 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 TPSD1Q9BZJ3 242 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 TRIM39Q9HCM9 518 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 LATS2Q9NRM7 1088 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 INTS9Q9NV88 658 aaKnown RBP12.03□□□□□ -0.48
HERC1-205ENST00000559886 ZNF358Q9NW07 568 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 DHRS7Q9Y394 339 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 BDP1A6H8Y1 2624 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 SLC31A1O15431 190 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 PI15O43692 258 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 CCDC166P0CW27 439 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 ETV4P43268 484 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 CDK3Q00526 305 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 DLG1Q12959 904 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 N4BP2L1Q5TBK1 243 aaPredicted RBP12.03□□□□□ -0.48
HERC1-205ENST00000559886 PAQR3Q6TCH7 311 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 KYAT3Q6YP21 454 aaKnown RBP12.03□□□□□ -0.48
HERC1-205ENST00000559886 DET1Q7L5Y6 550 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 HEATR4Q86WZ0 1026 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 SPNS2Q8IVW8 549 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 RASGEF1AQ8N9B8 481 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 GIMAP7Q8NHV1 300 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 LKAAEAR1Q8TD35 194 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 CD200R1Q8TD46 325 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 KCTD4Q8WVF5 259 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 ANKRD49Q8WVL7 239 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 SGF29Q96ES7 293 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms