RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 HERVK_113P63132 956 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 XIAPP98170 497 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 KLF10Q13118 480 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 UGT3A1Q6NUS8 523 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 PAQR3Q6TCH7 311 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 TAS2R42Q7RTR8 314 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 LYSMD3Q7Z3D4 306 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 CUZD1Q86UP6 607 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 CPSF7Q8N684 471 aaKnown RBP17.62■□□□□ 0.41
SNX1-208ENST00000559844 STAG3L4Q8TBR4 150 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 EZH1Q92800 747 aaPredicted RBP17.62■□□□□ 0.41
SNX1-208ENST00000559844 SHDQ96IW2 340 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 BIRC8Q96P09 236 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 TUBGCP5Q96RT8 1024 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 TTC1Q99614 292 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 ERVK-6Q9BXR3 956 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 GSTO2Q9H4Y5 243 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 WDR55Q9H6Y2 383 aaPredicted RBP17.62■□□□□ 0.41
SNX1-208ENST00000559844 ELOVL2Q9NXB9 296 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 SLC25A13Q9UJS0 675 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 NDRG2Q9UN36 371 aaKnown RBP17.62■□□□□ 0.41
SNX1-208ENST00000559844 TTC28Q96AY4 2481 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 SYCE1LA8MT33 242 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 KERAO60938 352 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 TM7SF2O76062 418 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 EGFP01133 1207 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 HNRNPLP14866 589 aaKnown RBP eCLIP17.62■□□□□ 0.41
SNX1-208ENST00000559844 DRD1P21728 446 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 CDKN1CP49918 316 aaPredicted RBP17.62■□□□□ 0.41
SNX1-208ENST00000559844 NAA20P61599 178 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 SULT2A1Q06520 285 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 EIF4HQ15056 248 aaKnown RBP17.62■□□□□ 0.41
SNX1-208ENST00000559844 ZRSR2Q15696 482 aaKnown RBP17.62■□□□□ 0.41
SNX1-208ENST00000559844 PDCD2Q16342 344 aaPredicted RBP17.62■□□□□ 0.41
SNX1-208ENST00000559844 PIANPQ8IYJ0 282 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 CYB5D2Q8WUJ1 264 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 KCNJ9Q92806 393 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 MAELQ96JY0 434 aaKnown RBP17.62■□□□□ 0.41
SNX1-208ENST00000559844 GPR21Q99679 349 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 RNPEPL1Q9HAU8 725 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 ZFYVE1Q9HBF4 777 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 TRMT6Q9UJA5 497 aaKnown RBP17.62■□□□□ 0.41
SNX1-208ENST00000559844 TMCO1Q9UM00 188 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 HS3ST2Q9Y278 367 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 PCDHB1Q9Y5F3 818 aa17.62■□□□□ 0.41
SNX1-208ENST00000559844 PEX11AO75192 247 aa17.61■□□□□ 0.41
SNX1-208ENST00000559844 SUPT7LO94864 414 aa17.61■□□□□ 0.41
SNX1-208ENST00000559844 ALPIP09923 528 aa17.61■□□□□ 0.41
SNX1-208ENST00000559844 SRCP12931 536 aa17.61■□□□□ 0.41
SNX1-208ENST00000559844 EPHA3P29320 983 aa17.61■□□□□ 0.41
SNX1-208ENST00000559844 KCNC1P48547 511 aa17.61■□□□□ 0.41
SNX1-208ENST00000559844 OR4D1Q15615 310 aa17.61■□□□□ 0.41
SNX1-208ENST00000559844 C6orf163Q5TEZ5 329 aa17.61■□□□□ 0.41
SNX1-208ENST00000559844 SCUBE1Q8IWY4 988 aa17.61■□□□□ 0.41
SNX1-208ENST00000559844 OR6K2Q8NGY2 324 aa17.61■□□□□ 0.41
SNX1-208ENST00000559844 CFAP61Q8NHU2 1237 aa17.61■□□□□ 0.41
SNX1-208ENST00000559844 RPL10LQ96L21 214 aaKnown RBP17.61■□□□□ 0.41
SNX1-208ENST00000559844 ATOH8Q96SQ7 321 aa17.61■□□□□ 0.41
SNX1-208ENST00000559844 CEP44Q9C0F1 390 aa17.61■□□□□ 0.41
SNX1-208ENST00000559844 APPL1Q9UKG1 709 aa17.61■□□□□ 0.41
SNX1-208ENST00000559844 MED16Q9Y2X0 877 aa17.61■□□□□ 0.41
SNX1-208ENST00000559844 MUC3AQ02505 3323 aa17.61■□□□□ 0.41
SNX1-208ENST00000559844 MUC22E2RYF6 1773 aaPredicted RBP17.61■□□□□ 0.41
SNX1-208ENST00000559844 ANTXRLA6NF34 631 aa17.6■□□□□ 0.41
SNX1-208ENST00000559844 CAPN8A6NHC0 703 aa17.6■□□□□ 0.41
SNX1-208ENST00000559844 K7EQS6 105 aa17.6■□□□□ 0.41
SNX1-208ENST00000559844 ZNF821O75541 412 aaPredicted RBP17.6■□□□□ 0.41
SNX1-208ENST00000559844 CIB2O75838 187 aa17.6■□□□□ 0.41
SNX1-208ENST00000559844 THRAP10827 490 aa17.6■□□□□ 0.41
SNX1-208ENST00000559844 COX4I1P13073 169 aa17.6■□□□□ 0.41
SNX1-208ENST00000559844 CPOXP36551 454 aa17.6■□□□□ 0.41
SNX1-208ENST00000559844 SEC13P55735 322 aa17.6■□□□□ 0.41
SNX1-208ENST00000559844 STARD6P59095 220 aa17.6■□□□□ 0.41
SNX1-208ENST00000559844 ECT2LQ008S8 904 aa17.6■□□□□ 0.41
SNX1-208ENST00000559844 PTPRRQ15256 657 aa17.6■□□□□ 0.41
SNX1-208ENST00000559844 SETMARQ53H47 684 aaPredicted RBP17.6■□□□□ 0.41
SNX1-208ENST00000559844 DGKKQ5KSL6 1271 aa17.6■□□□□ 0.41
SNX1-208ENST00000559844 CTSL3PQ5NE16 218 aa17.6■□□□□ 0.41
SNX1-208ENST00000559844 NXNQ6DKJ4 435 aa17.6■□□□□ 0.41
SNX1-208ENST00000559844 PTGR2Q8N8N7 351 aaPredicted RBP17.6■□□□□ 0.41
SNX1-208ENST00000559844 CEP70Q8NHQ1 597 aa17.6■□□□□ 0.41
SNX1-208ENST00000559844 UCMAQ8WVF2 138 aa17.6■□□□□ 0.41
SNX1-208ENST00000559844 TNKS2Q9H2K2 1166 aa17.6■□□□□ 0.41
SNX1-208ENST00000559844 RNF112Q9ULX5 631 aa17.6■□□□□ 0.41
SNX1-208ENST00000559844 FNDC3AQ9Y2H6 1198 aaKnown RBP17.6■□□□□ 0.41
SNX1-208ENST00000559844 E5RI56 91 aa17.6■□□□□ 0.41
SNX1-208ENST00000559844 H3BMM5 538 aa17.6■□□□□ 0.41
SNX1-208ENST00000559844 TNFRSF4P43489 277 aa17.6■□□□□ 0.41
SNX1-208ENST00000559844 STK19P49842 368 aaPredicted RBP17.6■□□□□ 0.41
SNX1-208ENST00000559844 PTPN5P54829 565 aa17.6■□□□□ 0.41
SNX1-208ENST00000559844 UBXN2BQ14CS0 331 aa17.6■□□□□ 0.41
SNX1-208ENST00000559844 UNC50Q53HI1 259 aa17.6■□□□□ 0.41
SNX1-208ENST00000559844 LYPLAL1Q5VWZ2 237 aa17.6■□□□□ 0.41
SNX1-208ENST00000559844 C22orf39Q6P5X5 142 aa17.6■□□□□ 0.41
SNX1-208ENST00000559844 PCDH20Q8N6Y1 951 aaKnown RBP17.6■□□□□ 0.41
SNX1-208ENST00000559844 FBXO27Q8NI29 283 aa17.6■□□□□ 0.41
SNX1-208ENST00000559844 EXT2Q93063 718 aa17.6■□□□□ 0.41
SNX1-208ENST00000559844 PPP1R36Q96LQ0 422 aa17.6■□□□□ 0.41
SNX1-208ENST00000559844 RTKNQ9BST9 563 aa17.6■□□□□ 0.41
SNX1-208ENST00000559844 ZDHHC4Q9NPG8 344 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms