RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 DUX1O43812 170 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 RNF8O76064 485 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 CD82P27701 267 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 ACTR1BP42025 376 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 MMP13P45452 471 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 FASLGP48023 281 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 RENBPP51606 427 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 ZNF135P52742 658 aaPredicted RBP5.75□□□□□ -1.49
USP3-215ENST00000559771 STC1P52823 247 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 ACTR1AP61163 376 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 NIPAL4Q0D2K0 466 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 ILF3Q12906 894 aaKnown RBP eCLIP5.75□□□□□ -1.492e-6■■■■□ 21.5
USP3-215ENST00000559771 TRA2AQ13595 282 aaKnown RBP eCLIP5.75□□□□□ -1.49
USP3-215ENST00000559771 ZNF235Q14590 738 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 COLEC12Q5KU26 742 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 DNTTIP2Q5QJE6 756 aaKnown RBP5.75□□□□□ -1.49
USP3-215ENST00000559771 LRRC66Q68CR7 880 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 ANKS6Q68DC2 871 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 ALG1LQ6GMV1 187 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 TMEM71Q6P5X7 295 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 DOK6Q6PKX4 331 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 CLEC18BQ6UXF7 455 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 ADAMTSL4Q6UY14 1074 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 ARHGAP22Q7Z5H3 698 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 LRRC8AQ8IWT6 810 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 SFRP1Q8N474 314 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 AOPEPQ8N6M6 819 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 CLEC18CQ8NCF0 446 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 CCDC112Q8NEF3 446 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 MYRIPQ8NFW9 859 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 ARRDC2Q8TBH0 407 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 SLC37A2Q8TED4 501 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 PDCD6IPQ8WUM4 868 aaKnown RBP5.75□□□□□ -1.49
USP3-215ENST00000559771 MAML1Q92585 1016 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 HSPH1Q92598 858 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 ART4Q93070 314 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 UTP4Q969X6 686 aaKnown RBP5.75□□□□□ -1.49
USP3-215ENST00000559771 ZNF653Q96CK0 615 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 RTP4Q96DX8 246 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 DDA1Q9BW61 102 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 CDH19Q9H159 772 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 SLC25A18Q9H1K4 315 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 ZWILCHQ9H900 591 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.75□□□□□ -1.49
USP3-215ENST00000559771 DONSONQ9NYP3 566 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 SEPT10Q9P0V9 454 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 MYO1AQ9UBC5 1043 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 PILRAQ9UKJ1 303 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 PRKAB1Q9Y478 270 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 PTPN13Q12923 2485 aa5.75□□□□□ -1.49
USP3-215ENST00000559771 A0A0J9YYE9 177 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 LOC101059948A0A1B0GTJ6 334 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 EFCAB7A8K855 629 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 FADS2P1A8MWK0 482 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 B4E171 279 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 H3BRJ5 948 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 NKX2-8O15522 239 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 MFSD11O43934 449 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 RAD1O60671 282 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 MAP3K6O95382 1288 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 CLDN7O95471 211 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 TRBC1P01850 177 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 ATP1A1P05023 1023 aaKnown RBP5.74□□□□□ -1.49
USP3-215ENST00000559771 MMP2P08253 660 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 CYP2A6P11509 494 aaPredicted RBP5.74□□□□□ -1.49
USP3-215ENST00000559771 NFKB1P19838 968 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 CDK11BP21127 795 aaKnown RBP5.74□□□□□ -1.49
USP3-215ENST00000559771 HSPA9P38646 679 aaKnown RBP5.74□□□□□ -1.49
USP3-215ENST00000559771 TSPAN7P41732 249 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 GPR1P46091 355 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 EPHA4P54764 986 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 CDH6P55285 790 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 POLE2P56282 527 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 MC2RQ01718 297 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 DSC2Q02487 901 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 TLE1Q04724 770 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 GALNT2Q10471 571 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 SLC10A2Q12908 348 aaPredicted RBP5.74□□□□□ -1.49
USP3-215ENST00000559771 PAFAH1B3Q15102 231 aaKnown RBP5.74□□□□□ -1.49
USP3-215ENST00000559771 ASIC2Q16515 512 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 ATP13A4Q4VNC1 1196 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 BOLA3Q53S33 107 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 RALGPS1Q5JS13 557 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 ARMC12Q5T9G4 340 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 MARC1Q5VT66 337 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 NCBP2-AS2Q69YL0 99 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 RAET1GQ6H3X3 334 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 PPP1R2P3Q6NXS1 205 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 IYDQ6PHW0 289 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 TMCO3Q6UWJ1 677 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 ATG14Q6ZNE5 492 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 MARK2Q7KZI7 788 aaKnown RBP5.74□□□□□ -1.49
USP3-215ENST00000559771 ZNF765Q7L2R6 523 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 PTRH1Q86Y79 214 aaKnown RBP5.74□□□□□ -1.49
USP3-215ENST00000559771 FAM20CQ8IXL6 584 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 ATPAF2Q8N5M1 289 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 NIPA2Q8N8Q9 360 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 AGBL5Q8NDL9 886 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 ZNF564Q8TBZ8 553 aaPredicted RBP5.74□□□□□ -1.49
USP3-215ENST00000559771 TEKT4Q8WW24 435 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms