RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 INSL6Q9Y581 213 aa11.17□□□□□ -0.62
CLPX-204ENST00000559152 TRBV5-4A0A0C4DH59 114 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 H3BNX3 289 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 ACRP10323 421 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 HGFP14210 728 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 XRCC1P18887 633 aaPredicted RBP11.16□□□□□ -0.62
CLPX-204ENST00000559152 ITGB8P26012 769 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 ACRV1P26436 265 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 CD70P32970 193 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 TRIM25Q14258 630 aaKnown RBP11.16□□□□□ -0.62
CLPX-204ENST00000559152 PCBP2Q15366 365 aaKnown RBP eCLIP11.16□□□□□ -0.62
CLPX-204ENST00000559152 CDKN3Q16667 212 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 MYLK3Q32MK0 819 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 TTLL9Q3SXZ7 439 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 SPATS1Q496A3 300 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 ARHGAP15Q53QZ3 475 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 METTL2BQ6P1Q9 378 aaKnown RBP11.16□□□□□ -0.62
CLPX-204ENST00000559152 GPRIN3Q6ZVF9 776 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 USP45Q70EL2 814 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 PHYKPLQ8IUZ5 450 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 PQLC1Q8N2U9 271 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 KLHL23Q8NBE8 558 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 BHLHE22Q8NFJ8 381 aaPredicted RBP11.16□□□□□ -0.62
CLPX-204ENST00000559152 OR6K2Q8NGY2 324 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 HMGCLL1Q8TB92 370 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 GDPD5Q8WTR4 605 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 CLP1Q92989 425 aaKnown RBP11.16□□□□□ -0.62
CLPX-204ENST00000559152 PAWRQ96IZ0 340 aaKnown RBP11.16□□□□□ -0.62
CLPX-204ENST00000559152 LRGUKQ96M69 825 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 CPEB1Q9BZB8 566 aaKnown RBP11.16□□□□□ -0.62
CLPX-204ENST00000559152 CIPCQ9C0C6 399 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 SDR39U1Q9NRG7 319 aaPredicted RBP11.16□□□□□ -0.62
CLPX-204ENST00000559152 SPATS2LQ9NUQ6 558 aaKnown RBP11.16□□□□□ -0.62
CLPX-204ENST00000559152 POLG2Q9UHN1 485 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 CRLS1Q9UJA2 301 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 IKZF3Q9UKT9 509 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 LZTS1Q9Y250 596 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 MAGEA13PA6NCF6 341 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 LRRC14BA6NHZ5 514 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 NCF1BA6NI72 391 aaPredicted RBP11.16□□□□□ -0.62
CLPX-204ENST00000559152 NCF1CA8MVU1 366 aaPredicted RBP11.16□□□□□ -0.62
CLPX-204ENST00000559152 PPP6CO00743 305 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 FBP2O00757 339 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 ACOT8O14734 319 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 ANGPT2O15123 496 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 PRAMEF12O95522 483 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 ALDOCP09972 364 aaKnown RBP11.16□□□□□ -0.62
CLPX-204ENST00000559152 SRCP12931 536 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 NCF1P14598 390 aaPredicted RBP11.16□□□□□ -0.62
CLPX-204ENST00000559152 FOXA1P55317 472 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 DMC1Q14565 340 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 TRIP10Q15642 601 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 MAP7D1Q3KQU3 841 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 RARS2Q5T160 578 aaKnown RBP11.16□□□□□ -0.62
CLPX-204ENST00000559152 MACC1Q6ZN28 852 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 TPRG1Q6ZUI0 275 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 OTOP2Q7RTS6 562 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 PDSS2Q86YH6 399 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 PCDH20Q8N6Y1 951 aaKnown RBP11.16□□□□□ -0.62
CLPX-204ENST00000559152 ASIC4Q96FT7 647 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 SCRN2Q96FV2 425 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 ZNF641Q96N77 438 aaPredicted RBP11.16□□□□□ -0.62
CLPX-204ENST00000559152 FAM126AQ9BYI3 521 aaPredicted RBP11.16□□□□□ -0.62
CLPX-204ENST00000559152 CXorf56Q9H5V9 222 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 IL26Q9NPH9 171 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 GID8Q9NWU2 228 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 PLK2Q9NYY3 685 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 KLHL42Q9P2K6 505 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 SCOCQ9UIL1 159 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 ADAMTS6Q9UKP5 1117 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 PPIL1Q9Y3C6 166 aa11.16□□□□□ -0.62
CLPX-204ENST00000559152 ZBBXA8MT70 800 aa11.15□□□□□ -0.62
CLPX-204ENST00000559152 E2F3O00716 465 aa11.15□□□□□ -0.62
CLPX-204ENST00000559152 ZNF821O75541 412 aaPredicted RBP11.15□□□□□ -0.62
CLPX-204ENST00000559152 CLDN7O95471 211 aa11.15□□□□□ -0.62
CLPX-204ENST00000559152 POP4O95707 220 aaKnown RBP11.15□□□□□ -0.62
CLPX-204ENST00000559152 LINC00032P0C843 101 aa11.15□□□□□ -0.62
CLPX-204ENST00000559152 PRR35P0CG20 571 aa11.15□□□□□ -0.62
CLPX-204ENST00000559152 DPP6P42658 865 aa11.15□□□□□ -0.62
CLPX-204ENST00000559152 POLR2LP62875 67 aaKnown RBP11.15□□□□□ -0.62
CLPX-204ENST00000559152 PTPRRQ15256 657 aa11.15□□□□□ -0.62
CLPX-204ENST00000559152 DGKKQ5KSL6 1271 aa11.15□□□□□ -0.62
CLPX-204ENST00000559152 PAOXQ6QHF9 649 aa11.15□□□□□ -0.62
CLPX-204ENST00000559152 NECAB2Q7Z6G3 386 aa11.15□□□□□ -0.62
CLPX-204ENST00000559152 SYVN1Q86TM6 617 aa11.15□□□□□ -0.62
CLPX-204ENST00000559152 KBTBD2Q8IY47 623 aa11.15□□□□□ -0.62
CLPX-204ENST00000559152 LEMD2Q8NC56 503 aa11.15□□□□□ -0.62
CLPX-204ENST00000559152 ECHDC3Q96DC8 303 aa11.15□□□□□ -0.62
CLPX-204ENST00000559152 LMLNQ96KR4 655 aa11.15□□□□□ -0.62
CLPX-204ENST00000559152 TCF25Q9BQ70 676 aa11.15□□□□□ -0.62
CLPX-204ENST00000559152 TNKS2Q9H2K2 1166 aa11.15□□□□□ -0.62
CLPX-204ENST00000559152 TUBB1Q9H4B7 451 aa11.15□□□□□ -0.62
CLPX-204ENST00000559152 SUV39H2Q9H5I1 410 aa11.15□□□□□ -0.62
CLPX-204ENST00000559152 FBRSL1Q9HCM7 1045 aaKnown RBP11.15□□□□□ -0.62
CLPX-204ENST00000559152 TMEM181Q9P2C4 612 aa11.15□□□□□ -0.62
CLPX-204ENST00000559152 HECAQ9UBI9 543 aaPredicted RBP11.15□□□□□ -0.62
CLPX-204ENST00000559152 ZMYM5Q9UJ78 669 aa11.15□□□□□ -0.62
CLPX-204ENST00000559152 INTS6Q9UL03 887 aaKnown RBP11.15□□□□□ -0.62
CLPX-204ENST00000559152 E7ENX8 843 aa11.15□□□□□ -0.63
CLPX-204ENST00000559152 GAPDHSO14556 408 aaPredicted RBP11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms