RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 PDPK2PQ6A1A2 396 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 CCDC70Q6NSX1 233 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 SPRED1Q7Z699 444 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 CAND1Q86VP6 1230 aaKnown RBP12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 GALNT13Q8IUC8 556 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 MPP5Q8N3R9 675 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 ACTRT1Q8TDG2 376 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 GLMNQ92990 594 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 SGF29Q96ES7 293 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 ATXN7L3BQ96GX2 97 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 GSDMCQ9BYG8 508 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 CDH19Q9H159 772 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 LRRC40Q9H9A6 602 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 EVA1BQ9NVM1 165 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 NLE1Q9NVX2 485 aaPredicted RBP12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 OGFRQ9NZT2 677 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 LRIT1Q9P2V4 623 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 ZMIZ1Q9ULJ6 1067 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 CLCA2Q9UQC9 943 aa12.46□□□□□ -0.41
RABGGTA-207ENST00000558936 CCDC162PA2VCL2 907 aa12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 OR2AG2A6NM03 316 aa12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 STX7O15400 261 aaKnown RBP12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 AVILO75366 819 aa12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 CSO75390 466 aaKnown RBP12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 CDK14O94921 469 aa12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 F7P08709 466 aaPredicted RBP12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 GLB1P16278 677 aa12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 ZNF7P17097 686 aaPredicted RBP12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 FOXN2P32314 431 aa12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 SLC19A1P41440 591 aa12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 MAGEA6P43360 314 aa12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 CLCNKAP51800 687 aa12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 UBE2IP63279 158 aaKnown RBP12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 ZFP36L1Q07352 338 aaKnown RBP12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 NFATC2Q13469 925 aa12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 PRPSAP1Q14558 356 aa12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 RTP5Q14D33 572 aa12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 SLITRK4Q8IW52 837 aa12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 Q8N9G6 341 aaPredicted RBP12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 MAPK15Q8TD08 544 aa12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 ZCCHC14Q8WYQ9 949 aaKnown RBP12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 CPT1BQ92523 772 aa12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 PBKQ96KB5 322 aa12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 SRPK1Q96SB4 655 aaKnown RBP12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 NUDT22Q9BRQ3 303 aa12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 FOXP3Q9BZS1 431 aa12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 SEMA6CQ9H3T2 930 aa12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 LRRN3Q9H3W5 708 aa12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 ASB8Q9H765 288 aa12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 KCND1Q9NSA2 647 aa12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 KLC4Q9NSK0 619 aa12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 MARCH4Q9P2E8 410 aaPredicted RBP12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 DKK4Q9UBT3 224 aa12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 ZKSCAN5Q9Y2L8 839 aa12.45□□□□□ -0.42
RABGGTA-207ENST00000558936 URB1O60287 2271 aaKnown RBP12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 NUDT21O43809 227 aaKnown RBP12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 STK10O94804 968 aaKnown RBP12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 RPLP0P05388 317 aaKnown RBP12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 PNLIPP16233 465 aa12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 MC4RP32245 332 aa12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 FDFT1P37268 417 aa12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 FASLGP48023 281 aa12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 TERF1P54274 439 aa12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 DRG2P55039 364 aaKnown RBP12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 ILF3Q12906 894 aaKnown RBP eCLIP12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 NFE2L1Q14494 772 aa12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 TMEM220Q6QAJ8 160 aa12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 DET1Q7L5Y6 550 aa12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 PROSER1Q86XN7 944 aa12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 PHYKPLQ8IUZ5 450 aa12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 NAT6Q93015 286 aa12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 PMEPA1Q969W9 287 aa12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 C19orf43Q9BQ61 176 aa12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 ABCG4Q9H172 646 aa12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 CCDC86Q9H6F5 360 aaKnown RBP12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 RMI1Q9H9A7 625 aa12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 RDH14Q9HBH5 336 aa12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 PLAC1Q9HBJ0 212 aa12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 ASCL3Q9NQ33 180 aa12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 CHRAC1Q9NRG0 131 aa12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 RAD18Q9NS91 495 aa12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 TREX1Q9NSU2 369 aa12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 PAK5Q9P286 719 aa12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 DNAJC16Q9Y2G8 782 aa12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 SLC30A1Q9Y6M5 507 aa12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 DSPP15924 2871 aaKnown RBP12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 ACACAQ13085 2346 aa12.44□□□□□ -0.42
RABGGTA-207ENST00000558936 NBEAQ8NFP9 2946 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 IGHV1OR21-1A0A087WYE8 117 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 OR52A4PA6NMU1 304 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 SRRM3A6NNA2 597 aaPredicted RBP12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 D6RAR5 112 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 ZSCAN12O43309 604 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 VEGFDO43915 354 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 PPFIA2O75334 1257 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 POP7O75817 140 aaKnown RBP12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 KRT37O76014 449 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 MPOP05164 745 aa12.43□□□□□ -0.42
RABGGTA-207ENST00000558936 PTMAP06454 111 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms