RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 ZNF697Q5TEC3 545 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 KANK2Q63ZY3 851 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 TMC8Q8IU68 726 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 LILRA2Q8N149 483 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 NKAPQ8N5F7 415 aaKnown RBP10.51□□□□□ -0.73
CUX1-217ENST00000558836 JADE3Q92613 823 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 ATP6V1E2Q96A05 226 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 VPS33AQ96AX1 596 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 GCNAQ96QF7 691 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 BEGAINQ9BUH8 593 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 SEMA6AQ9H2E6 1030 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 DNMT3BQ9UBC3 853 aaKnown RBP10.51□□□□□ -0.73
CUX1-217ENST00000558836 HCFC2Q9Y5Z7 792 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 GBF1Q92538 1859 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 NPIPB15A6NHN6 443 aaPredicted RBP10.51□□□□□ -0.73
CUX1-217ENST00000558836 GFRA2O00451 464 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 PRMT5O14744 637 aaPredicted RBP10.51□□□□□ -0.73
CUX1-217ENST00000558836 SLC22A2O15244 555 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 LILRB3O75022 631 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 TRBC1P01850 177 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 BPIP17213 487 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 SLC7A2P52569 658 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 CACNG1Q06432 222 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 HERC3Q15034 1050 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 CHRNA6Q15825 494 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 ADGRG2Q8IZP9 1017 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 NAT16Q8N8M0 369 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 KREMEN2Q8NCW0 462 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 FAM110BQ8TC76 370 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 MIEF2Q96C03 454 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 LRRC3Q9BY71 257 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 KLHL4Q9C0H6 718 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 LINC00597Q9H2U6 94 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 NSUN3Q9H649 340 aaKnown RBP10.51□□□□□ -0.73
CUX1-217ENST00000558836 NOL11Q9H8H0 719 aaKnown RBP10.51□□□□□ -0.73
CUX1-217ENST00000558836 CXXC1Q9P0U4 656 aaPredicted RBP10.51□□□□□ -0.73
CUX1-217ENST00000558836 CD84Q9UIB8 345 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 ZMYM5Q9UJ78 669 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 PCTPQ9UKL6 214 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 PLXNA4Q9HCM2 1894 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 MYO15AQ9UKN7 3530 aa10.51□□□□□ -0.73
CUX1-217ENST00000558836 NEDD8-MDP1E9PL57 170 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 MAP3K13O43283 966 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 SLC25A14O95258 325 aaPredicted RBP10.5□□□□□ -0.73
CUX1-217ENST00000558836 FGF4P08620 206 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 HOXB8P17481 243 aaPredicted RBP10.5□□□□□ -0.73
CUX1-217ENST00000558836 CAPN3P20807 821 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 PTGER3P43115 390 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 POM121L1PQ3SYA9 428 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 PLPP4Q5VZY2 271 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 ASTLQ6HA08 431 aaPredicted RBP10.5□□□□□ -0.73
CUX1-217ENST00000558836 MBOAT1Q6ZNC8 495 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 FRA10AC1Q70Z53 315 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 PDSS2Q86YH6 399 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 PHYKPLQ8IUZ5 450 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 OR2T11Q8NH01 316 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 KCNJ9Q92806 393 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 SPDL1Q96EA4 605 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 CLPBQ9H078 707 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 ZBP1Q9H171 429 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 P2RY12Q9H244 342 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 RETREG1Q9H6L5 497 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 MAGEE1Q9HCI5 957 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 HECAQ9UBI9 543 aaPredicted RBP10.5□□□□□ -0.73
CUX1-217ENST00000558836 MBD1Q9UIS9 605 aaPredicted RBP10.5□□□□□ -0.73
CUX1-217ENST00000558836 KRT87PA6NCN2 255 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 SYCE1LA8MT33 242 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 E2F3O00716 465 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 ACOT8O14734 319 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 RNASEH1O60930 286 aaKnown RBP10.5□□□□□ -0.73
CUX1-217ENST00000558836 SNUPNO95149 360 aaKnown RBP10.5□□□□□ -0.73
CUX1-217ENST00000558836 TIMP1P01033 207 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 PENKP01210 267 aaPredicted RBP10.5□□□□□ -0.73
CUX1-217ENST00000558836 PAX7P23759 505 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 NTHL1P78549 312 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 PLIN5Q00G26 463 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 NFATC2Q13469 925 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 CBX2Q14781 532 aaPredicted RBP10.5□□□□□ -0.73
CUX1-217ENST00000558836 IL23RQ5VWK5 629 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 ARMCX6Q7L4S7 300 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 PQLC1Q8N2U9 271 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 GALNT4Q8N4A0 578 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 GPR26Q8NDV2 337 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 PHC3Q8NDX5 983 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 GRIN3AQ8TCU5 1115 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 SORCS1Q8WY21 1168 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 PKP2Q99959 881 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 TCF25Q9BQ70 676 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 BATF3Q9NR55 127 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 MAP10Q9P2G4 905 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 EGFL7Q9UHF1 273 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 CRLS1Q9UJA2 301 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 OBSL1O75147 1896 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 PFDN6O15212 129 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 BAIAP3O94812 1187 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 ESR1P03372 595 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 UGT2B4P06133 528 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 RPS17P08708 135 aaKnown RBP10.5□□□□□ -0.73
CUX1-217ENST00000558836 SRCP12931 536 aa10.5□□□□□ -0.73
CUX1-217ENST00000558836 HSPA7P48741 367 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms