RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 FADS2P1A8MWK0 482 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 PSMD11O00231 422 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 MEN1O00255 615 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 FOXN3O00409 490 aaPredicted RBP11.63□□□□□ -0.55
SMAD3-206ENST00000558739 JRKO75564 520 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 RAB40ALP0C0E4 278 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 SLC2A4P14672 509 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 XRCC1P18887 633 aaPredicted RBP11.63□□□□□ -0.55
SMAD3-206ENST00000558739 CAPN3P20807 821 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 SDC4P31431 198 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 STX17P56962 302 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 AP1S1P61966 158 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 CDC16Q13042 620 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 NCF4Q15080 339 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 ISM2Q6H9L7 571 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 PLEKHA7Q6IQ23 1121 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 FBXO38Q6PIJ6 1188 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 CRTC3Q6UUV7 619 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 ZNF765Q7L2R6 523 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 PHYKPLQ8IUZ5 450 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 TRIM48Q8IWZ4 208 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 SYTL1Q8IYJ3 562 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 PGBD5Q8N414 524 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 NPWQ8N729 165 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 TMEM35BQ8NCS4 154 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 NRGNQ92686 78 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 ZDHHC12Q96GR4 267 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 CNDP1Q96KN2 507 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 FCRL4Q96PJ5 515 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 MCCC2Q9HCC0 563 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 SLC40A1Q9NP59 571 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 PCMTD2Q9NV79 361 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 VPS18Q9P253 973 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 KIAA1468Q9P260 1216 aa11.63□□□□□ -0.55
SMAD3-206ENST00000558739 TRGV8A0A0C4DH27 118 aa11.62□□□□□ -0.55
SMAD3-206ENST00000558739 FAM155BO75949 473 aa11.62□□□□□ -0.55
SMAD3-206ENST00000558739 ZNF202O95125 648 aa11.62□□□□□ -0.55
SMAD3-206ENST00000558739 ZNF8P17098 575 aaPredicted RBP11.62□□□□□ -0.55
SMAD3-206ENST00000558739 RPL10P27635 214 aaKnown RBP11.62□□□□□ -0.55
SMAD3-206ENST00000558739 TSFMP43897 325 aaKnown RBP11.62□□□□□ -0.55
SMAD3-206ENST00000558739 DRG2P55039 364 aaKnown RBP11.62□□□□□ -0.55
SMAD3-206ENST00000558739 TUBB4BP68371 445 aa11.62□□□□□ -0.55
SMAD3-206ENST00000558739 ADORA2A-AS1P86434 159 aa11.62□□□□□ -0.55
SMAD3-206ENST00000558739 OTUD4Q01804 1114 aaKnown RBP11.62□□□□□ -0.55
SMAD3-206ENST00000558739 ACY1Q03154 408 aa11.62□□□□□ -0.55
SMAD3-206ENST00000558739 PTSQ03393 145 aa11.62□□□□□ -0.55
SMAD3-206ENST00000558739 SLC10A7Q0GE19 358 aa11.62□□□□□ -0.55
SMAD3-206ENST00000558739 TUBB2AQ13885 445 aa11.62□□□□□ -0.55
SMAD3-206ENST00000558739 ZFYVE27Q5T4F4 411 aa11.62□□□□□ -0.55
SMAD3-206ENST00000558739 NAA35Q5VZE5 725 aa11.62□□□□□ -0.55
SMAD3-206ENST00000558739 KLHL10Q6JEL2 608 aa11.62□□□□□ -0.55
SMAD3-206ENST00000558739 ARHGAP12Q8IWW6 846 aa11.62□□□□□ -0.55
SMAD3-206ENST00000558739 LZTR1Q8N653 840 aa11.62□□□□□ -0.55
SMAD3-206ENST00000558739 CLEC1AQ8NC01 280 aa11.62□□□□□ -0.55
SMAD3-206ENST00000558739 GPR150Q8NGU9 434 aa11.62□□□□□ -0.55
SMAD3-206ENST00000558739 CENPIQ92674 756 aaPredicted RBP11.62□□□□□ -0.55
SMAD3-206ENST00000558739 NTAN1Q96AB6 310 aa11.62□□□□□ -0.55
SMAD3-206ENST00000558739 WDR24Q96S15 920 aa11.62□□□□□ -0.55
SMAD3-206ENST00000558739 TUBB2BQ9BVA1 445 aa11.62□□□□□ -0.55
SMAD3-206ENST00000558739 TLR10Q9BXR5 811 aa11.62□□□□□ -0.55
SMAD3-206ENST00000558739 NOD2Q9HC29 1040 aa11.62□□□□□ -0.55
SMAD3-206ENST00000558739 SIX2Q9NPC8 291 aa11.62□□□□□ -0.55
SMAD3-206ENST00000558739 OLAHQ9NV23 265 aa11.62□□□□□ -0.55
SMAD3-206ENST00000558739 GPATCH2LQ9NWQ4 482 aa11.62□□□□□ -0.55
SMAD3-206ENST00000558739 DTLQ9NZJ0 730 aa11.62□□□□□ -0.55
SMAD3-206ENST00000558739 EPHA6Q9UF33 1036 aa11.62□□□□□ -0.55
SMAD3-206ENST00000558739 DNAJC16Q9Y2G8 782 aa11.62□□□□□ -0.55
SMAD3-206ENST00000558739 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.62□□□□□ -0.55
SMAD3-206ENST00000558739 ADGRG1Q9Y653 693 aa11.62□□□□□ -0.55
SMAD3-206ENST00000558739 OR5K4A6NMS3 321 aa11.61□□□□□ -0.55
SMAD3-206ENST00000558739 PDZK1P1A8MUH7 402 aa11.61□□□□□ -0.55
SMAD3-206ENST00000558739 CCL21O00585 134 aa11.61□□□□□ -0.55
SMAD3-206ENST00000558739 LDB2O43679 373 aa11.61□□□□□ -0.55
SMAD3-206ENST00000558739 KLF7O75840 302 aaPredicted RBP11.61□□□□□ -0.55
SMAD3-206ENST00000558739 PDHA1P08559 390 aa11.61□□□□□ -0.55
SMAD3-206ENST00000558739 CYP2A6P11509 494 aaPredicted RBP11.61□□□□□ -0.55
SMAD3-206ENST00000558739 MAXP61244 160 aa11.61□□□□□ -0.55
SMAD3-206ENST00000558739 ZNF169Q14929 603 aaPredicted RBP11.61□□□□□ -0.55
SMAD3-206ENST00000558739 ZNF789Q5FWF6 425 aa11.61□□□□□ -0.55
SMAD3-206ENST00000558739 Q71RC1 249 aaPredicted RBP11.61□□□□□ -0.55
SMAD3-206ENST00000558739 ARCQ7LC44 396 aa11.61□□□□□ -0.55
SMAD3-206ENST00000558739 SLFN11Q7Z7L1 901 aa11.61□□□□□ -0.55
SMAD3-206ENST00000558739 RAB43Q86YS6 212 aa11.61□□□□□ -0.55
SMAD3-206ENST00000558739 CEP97Q8IW35 865 aa11.61□□□□□ -0.55
SMAD3-206ENST00000558739 EXD1Q8NHP7 514 aa11.61□□□□□ -0.55
SMAD3-206ENST00000558739 PPP4R1Q8TF05 950 aa11.61□□□□□ -0.55
SMAD3-206ENST00000558739 UBXN4Q92575 508 aa11.61□□□□□ -0.55
SMAD3-206ENST00000558739 C14orf79Q96F83 325 aa11.61□□□□□ -0.55
SMAD3-206ENST00000558739 SCRN2Q96FV2 425 aa11.61□□□□□ -0.55
SMAD3-206ENST00000558739 PSKH2Q96QS6 385 aa11.61□□□□□ -0.55
SMAD3-206ENST00000558739 OR2AG1Q9H205 316 aa11.61□□□□□ -0.55
SMAD3-206ENST00000558739 PDCL3Q9H2J4 239 aa11.61□□□□□ -0.55
SMAD3-206ENST00000558739 SP110Q9HB58 689 aa11.61□□□□□ -0.55
SMAD3-206ENST00000558739 TMEM51Q9NW97 253 aa11.61□□□□□ -0.55
SMAD3-206ENST00000558739 KCTD5Q9NXV2 234 aa11.61□□□□□ -0.55
SMAD3-206ENST00000558739 TMEM63CQ9P1W3 806 aa11.61□□□□□ -0.55
SMAD3-206ENST00000558739 ATXN10Q9UBB4 475 aa11.61□□□□□ -0.55
SMAD3-206ENST00000558739 TRIM10Q9UDY6 481 aa11.61□□□□□ -0.55
SMAD3-206ENST00000558739 ANK2Q01484 3957 aa11.6□□□□□ -0.55
SMAD3-206ENST00000558739 KIAA1324LA8MWY0 1029 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms