RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 EZH1Q92800 747 aaPredicted RBP15.32■□□□□ 0.04
AP4E1-202ENST00000558439 CXorf21Q9HAI6 301 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 ZNF490Q9ULM2 529 aaPredicted RBP15.32■□□□□ 0.04
AP4E1-202ENST00000558439 OGNP20774 298 aaKnown RBP15.32■□□□□ 0.04
AP4E1-202ENST00000558439 MTHFRP42898 656 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 FOXA1P55317 472 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 SPPL2AQ8TCT8 520 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 PTERQ96BW5 349 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 FOPNLQ96NB1 174 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 ARMC7Q9H6L4 198 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 SLC38A8A6NNN8 435 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 MAN1A2O60476 641 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 NBNO60934 754 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 C21orf59P57076 290 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 TRAP1Q12931 704 aaKnown RBP15.31■□□□□ 0.04
AP4E1-202ENST00000558439 OR4D1Q15615 310 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 TRIM16LQ309B1 348 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 FAM174BQ3ZCQ3 159 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 SMYD5Q6GMV2 418 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 FBXL19Q6PCT2 694 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 TMEM26Q6ZUK4 368 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 SERPINA9Q86WD7 417 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 UMODL1-AS1Q8N2C9 162 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 RNF217Q8TC41 542 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 FBXL20Q96IG2 436 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 SLC29A1Q99808 456 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 HPS4Q9NQG7 708 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 TMEM248Q9NWD8 314 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 TBC1D30Q9Y2I9 924 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 A0A1B0GVG6 124 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 CD1EP15812 388 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 CD1DP15813 335 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 PRIM2P49643 509 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 PGFP49763 221 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 CDKL1Q00532 357 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 MERTKQ12866 999 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 MAD2L1Q13257 205 aaPredicted RBP15.31■□□□□ 0.04
AP4E1-202ENST00000558439 GALNT5Q7Z7M9 940 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 CLEC14AQ86T13 490 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 PNPT1Q8TCS8 783 aaKnown RBP15.31■□□□□ 0.04
AP4E1-202ENST00000558439 GPR62Q9BZJ7 368 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 GNPTGQ9UJJ9 305 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 FAM32AQ9Y421 112 aaKnown RBP15.31■□□□□ 0.04
AP4E1-202ENST00000558439 NRXN2Q9P2S2 1712 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 A0A1W2PQ67 120 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 MGAT4DA6NG13 374 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 KERAO60938 352 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 C1QAP02745 245 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 ITPKAP23677 461 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 POU1F1P28069 291 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 CDH4P55283 916 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 INHBEP58166 350 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 ARHGEF6Q15052 776 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 MYLK3Q32MK0 819 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 LDLRAP1Q5SW96 308 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 FAM219BQ5XKK7 198 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 UPF1Q92900 1129 aaKnown RBP eCLIP15.31■□□□□ 0.04
AP4E1-202ENST00000558439 PCDHGA7Q9Y5G6 932 aa15.31■□□□□ 0.04
AP4E1-202ENST00000558439 FOCADQ5VW36 1801 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 HTRA2O43464 458 aaPredicted RBP15.3■□□□□ 0.04
AP4E1-202ENST00000558439 NOBOXO60393 691 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 IGSF6O95976 241 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 PABPC4LP0CB38 370 aaKnown RBP15.3■□□□□ 0.04
AP4E1-202ENST00000558439 PAX3P23760 479 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 CDKN1CP49918 316 aaPredicted RBP15.3■□□□□ 0.04
AP4E1-202ENST00000558439 DAB2P98082 770 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 IRF8Q02556 426 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 ITGADQ13349 1161 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 GTF2H2Q13888 395 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 STARD3Q14849 445 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 USP41Q3LFD5 358 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 GTF2H2CQ6P1K8 395 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 RNF19BQ6ZMZ0 732 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 SYT12Q8IV01 421 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 FBXO22Q8NEZ5 403 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 CEP19Q96LK0 163 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 C3orf30Q96M34 536 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 ATG10Q9H0Y0 220 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.3■□□□□ 0.04
AP4E1-202ENST00000558439 A0A1B0GVM2 712 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 SERPINA4P29622 427 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 TAF1AQ15573 450 aaPredicted RBP15.3■□□□□ 0.04
AP4E1-202ENST00000558439 SLC44A4Q53GD3 710 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 TTC23LQ6PF05 361 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 IFNL1Q8IU54 200 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 SLC15A3Q8IY34 581 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 RBFAQ8N0V3 343 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 MYO19Q96H55 970 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 APOLD1Q96LR9 279 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 EXOSC4Q9NPD3 245 aaKnown RBP15.3■□□□□ 0.04
AP4E1-202ENST00000558439 QSER1Q2KHR3 1735 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 SYNDIG1LA6NDD5 238 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 SP3Q02447 781 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 SIM2Q14190 667 aaPredicted RBP15.3■□□□□ 0.04
AP4E1-202ENST00000558439 MAPK11Q15759 364 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 RAB41Q5JT25 222 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 FAM171BQ6P995 826 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 ADCK2Q7Z695 626 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 TMEM132CQ8N3T6 1108 aa15.3■□□□□ 0.04
AP4E1-202ENST00000558439 ZFP28Q8NHY6 868 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms