RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 LRBAP50851 2863 aa17.52■□□□□ 0.39
TSPAN3-204ENST00000558394 RGSL1A5PLK6 1076 aa17.51■□□□□ 0.39
TSPAN3-204ENST00000558394 A6NL46 340 aa17.51■□□□□ 0.39
TSPAN3-204ENST00000558394 TMCO5BA8MYB1 307 aa17.51■□□□□ 0.39
TSPAN3-204ENST00000558394 GPR89AB7ZAQ6 455 aa17.51■□□□□ 0.39
TSPAN3-204ENST00000558394 ZNF185O15231 689 aa17.51■□□□□ 0.39
TSPAN3-204ENST00000558394 CPNE3O75131 537 aaKnown RBP17.51■□□□□ 0.39
TSPAN3-204ENST00000558394 TMEM63AO94886 807 aa17.51■□□□□ 0.39
TSPAN3-204ENST00000558394 KLK3P07288 261 aaPredicted RBP17.51■□□□□ 0.39
TSPAN3-204ENST00000558394 GPR89BP0CG08 455 aa17.51■□□□□ 0.39
TSPAN3-204ENST00000558394 ATP1A3P13637 1013 aa17.51■□□□□ 0.39
TSPAN3-204ENST00000558394 LPOP22079 712 aaPredicted RBP17.51■□□□□ 0.39
TSPAN3-204ENST00000558394 CES1P23141 567 aa17.51■□□□□ 0.39
TSPAN3-204ENST00000558394 ZNF569Q5MCW4 686 aa17.51■□□□□ 0.39
TSPAN3-204ENST00000558394 IQCKQ8N0W5 287 aa17.51■□□□□ 0.39
TSPAN3-204ENST00000558394 FDCSPQ8NFU4 85 aa17.51■□□□□ 0.39
TSPAN3-204ENST00000558394 SPATA16Q9BXB7 569 aa17.51■□□□□ 0.39
TSPAN3-204ENST00000558394 AKIRIN1Q9H9L7 192 aaPredicted RBP17.51■□□□□ 0.39
TSPAN3-204ENST00000558394 TRIM39Q9HCM9 518 aa17.51■□□□□ 0.39
TSPAN3-204ENST00000558394 ARFGAP3Q9NP61 516 aa17.51■□□□□ 0.39
TSPAN3-204ENST00000558394 ETNK2Q9NVF9 386 aa17.51■□□□□ 0.39
TSPAN3-204ENST00000558394 GPR83Q9NYM4 423 aa17.51■□□□□ 0.39
TSPAN3-204ENST00000558394 SNX7Q9UNH6 387 aa17.51■□□□□ 0.39
TSPAN3-204ENST00000558394 ANKRD17O75179 2603 aaKnown RBP17.51■□□□□ 0.39
TSPAN3-204ENST00000558394 SSU72P8A0A1W2PR75 194 aa17.5■□□□□ 0.39
TSPAN3-204ENST00000558394 KMOO15229 486 aa17.5■□□□□ 0.39
TSPAN3-204ENST00000558394 ATMINO43313 823 aaPredicted RBP17.5■□□□□ 0.39
TSPAN3-204ENST00000558394 KRT86O43790 486 aa17.5■□□□□ 0.39
TSPAN3-204ENST00000558394 CEACAM4O75871 244 aa17.5■□□□□ 0.39
TSPAN3-204ENST00000558394 FOLR1P15328 257 aa17.5■□□□□ 0.39
TSPAN3-204ENST00000558394 RPL10P27635 214 aaKnown RBP17.5■□□□□ 0.39
TSPAN3-204ENST00000558394 RPL26P61254 145 aaKnown RBP17.5■□□□□ 0.39
TSPAN3-204ENST00000558394 UBE2HP62256 183 aa17.5■□□□□ 0.39
TSPAN3-204ENST00000558394 GPR18Q14330 331 aa17.5■□□□□ 0.39
TSPAN3-204ENST00000558394 KCNAB1Q14722 419 aa17.5■□□□□ 0.39
TSPAN3-204ENST00000558394 KRT31Q15323 416 aa17.5■□□□□ 0.39
TSPAN3-204ENST00000558394 SMTNL2Q2TAL5 461 aa17.5■□□□□ 0.39
TSPAN3-204ENST00000558394 PLEKHA7Q6IQ23 1121 aa17.5■□□□□ 0.39
TSPAN3-204ENST00000558394 KLHL35Q6PF15 583 aa17.5■□□□□ 0.39
TSPAN3-204ENST00000558394 LRRTM4Q86VH4 590 aa17.5■□□□□ 0.39
TSPAN3-204ENST00000558394 TMEM126BQ8IUX1 230 aa17.5■□□□□ 0.39
TSPAN3-204ENST00000558394 LRRC49Q8IUZ0 686 aa17.5■□□□□ 0.39
TSPAN3-204ENST00000558394 HSPH1Q92598 858 aa17.5■□□□□ 0.39
TSPAN3-204ENST00000558394 ZNF514Q96K75 400 aaPredicted RBP17.5■□□□□ 0.39
TSPAN3-204ENST00000558394 WDR24Q96S15 920 aa17.5■□□□□ 0.39
TSPAN3-204ENST00000558394 TDRD1Q9BXT4 1180 aaKnown RBP17.5■□□□□ 0.39
TSPAN3-204ENST00000558394 RAB33BQ9H082 229 aa17.5■□□□□ 0.39
TSPAN3-204ENST00000558394 PCDH9Q9HC56 1237 aa17.5■□□□□ 0.39
TSPAN3-204ENST00000558394 SLC40A1Q9NP59 571 aa17.5■□□□□ 0.39
TSPAN3-204ENST00000558394 FGF21Q9NSA1 209 aa17.5■□□□□ 0.39
TSPAN3-204ENST00000558394 RPL26L1Q9UNX3 145 aaKnown RBP17.5■□□□□ 0.39
TSPAN3-204ENST00000558394 ANKUB1A6NFN9 424 aa17.49■□□□□ 0.39
TSPAN3-204ENST00000558394 TMEM191CA6NGB0 347 aa17.49■□□□□ 0.39
TSPAN3-204ENST00000558394 SCRG1O75711 98 aa17.49■□□□□ 0.39
TSPAN3-204ENST00000558394 EBLN1P0CF75 366 aa17.49■□□□□ 0.39
TSPAN3-204ENST00000558394 ZNF7P17097 686 aaPredicted RBP17.49■□□□□ 0.39
TSPAN3-204ENST00000558394 VCLP18206 1134 aa17.49■□□□□ 0.39
TSPAN3-204ENST00000558394 IDSP22304 550 aa17.49■□□□□ 0.39
TSPAN3-204ENST00000558394 HALP42357 657 aa17.49■□□□□ 0.39
TSPAN3-204ENST00000558394 RRADP55042 308 aa17.49■□□□□ 0.39
TSPAN3-204ENST00000558394 DSC2Q02487 901 aa17.49■□□□□ 0.39
TSPAN3-204ENST00000558394 DPYSL2Q16555 572 aa17.49■□□□□ 0.39
TSPAN3-204ENST00000558394 ZNF648Q5T619 568 aaPredicted RBP17.49■□□□□ 0.39
TSPAN3-204ENST00000558394 CYP4V2Q6ZWL3 525 aaPredicted RBP17.49■□□□□ 0.39
TSPAN3-204ENST00000558394 MED25Q71SY5 747 aa17.49■□□□□ 0.39
TSPAN3-204ENST00000558394 POLNQ7Z5Q5 900 aa17.49■□□□□ 0.39
TSPAN3-204ENST00000558394 TEX26Q8N6G2 289 aa17.49■□□□□ 0.39
TSPAN3-204ENST00000558394 RBMXL3Q8N7X1 1067 aaKnown RBP17.49■□□□□ 0.39
TSPAN3-204ENST00000558394 TMEM102Q8N9M5 508 aaPredicted RBP17.49■□□□□ 0.39
TSPAN3-204ENST00000558394 SNRNP40Q96DI7 357 aaKnown RBP17.49■□□□□ 0.39
TSPAN3-204ENST00000558394 C19orf60Q96EN9 201 aa17.49■□□□□ 0.39
TSPAN3-204ENST00000558394 SLC41A2Q96JW4 573 aa17.49■□□□□ 0.39
TSPAN3-204ENST00000558394 CSPG4P5Q96PW8 444 aa17.49■□□□□ 0.39
TSPAN3-204ENST00000558394 LYSMD1Q96S90 227 aa17.49■□□□□ 0.39
TSPAN3-204ENST00000558394 MLPHQ9BV36 600 aaPredicted RBP17.49■□□□□ 0.39
TSPAN3-204ENST00000558394 NUDT9Q9BW91 350 aa17.49■□□□□ 0.39
TSPAN3-204ENST00000558394 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.49■□□□□ 0.39
TSPAN3-204ENST00000558394 ADGRG1Q9Y653 693 aa17.49■□□□□ 0.39
TSPAN3-204ENST00000558394 IGHV5-51A0A0C4DH38 117 aa17.48■□□□□ 0.39
TSPAN3-204ENST00000558394 UBA6A0AVT1 1052 aaPredicted RBP17.48■□□□□ 0.39
TSPAN3-204ENST00000558394 OR52A4PA6NMU1 304 aa17.48■□□□□ 0.39
TSPAN3-204ENST00000558394 CBX6O95503 412 aa17.48■□□□□ 0.39
TSPAN3-204ENST00000558394 FERP16591 822 aa17.48■□□□□ 0.39
TSPAN3-204ENST00000558394 POU3F2P20265 443 aaPredicted RBP17.48■□□□□ 0.39
TSPAN3-204ENST00000558394 ZNF165P49910 485 aa17.48■□□□□ 0.39
TSPAN3-204ENST00000558394 BOLA3Q53S33 107 aa17.48■□□□□ 0.39
TSPAN3-204ENST00000558394 IZUMO3Q5VZ72 239 aa17.48■□□□□ 0.39
TSPAN3-204ENST00000558394 ALS2CLQ60I27 953 aa17.48■□□□□ 0.39
TSPAN3-204ENST00000558394 TIGD7Q6NT04 549 aaPredicted RBP17.48■□□□□ 0.39
TSPAN3-204ENST00000558394 ABRAXAS1Q6UWZ7 409 aa17.48■□□□□ 0.39
TSPAN3-204ENST00000558394 KMT5CQ86Y97 462 aa17.48■□□□□ 0.39
TSPAN3-204ENST00000558394 TTC30BQ8N4P2 665 aa17.48■□□□□ 0.39
TSPAN3-204ENST00000558394 ANKRD20A12PQ8NF67 263 aa17.48■□□□□ 0.39
TSPAN3-204ENST00000558394 TIMM29Q9BSF4 260 aa17.48■□□□□ 0.39
TSPAN3-204ENST00000558394 ASF1BQ9NVP2 202 aa17.48■□□□□ 0.39
TSPAN3-204ENST00000558394 TAS2R14Q9NYV8 317 aa17.48■□□□□ 0.39
TSPAN3-204ENST00000558394 TRIM10Q9UDY6 481 aa17.48■□□□□ 0.39
TSPAN3-204ENST00000558394 SLC23A2Q9UGH3 650 aa17.48■□□□□ 0.39
TSPAN3-204ENST00000558394 C2CD3Q4AC94 2353 aa17.47■□□□□ 0.39
TSPAN3-204ENST00000558394 CHUKO15111 745 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms