RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 RASGEF1AQ8N9B8 481 aa21.01■□□□□ 0.95
CASC4-204ENST00000557945 EIF1ADQ8N9N8 165 aaKnown RBP21.01■□□□□ 0.95
CASC4-204ENST00000557945 GPR150Q8NGU9 434 aa21.01■□□□□ 0.95
CASC4-204ENST00000557945 GABPB2Q8TAK5 448 aaPredicted RBP21.01■□□□□ 0.95
CASC4-204ENST00000557945 CALML6Q8TD86 181 aa21.01■□□□□ 0.95
CASC4-204ENST00000557945 FAM167BQ9BTA0 163 aa21.01■□□□□ 0.95
CASC4-204ENST00000557945 BOCQ9BWV1 1114 aa21.01■□□□□ 0.95
CASC4-204ENST00000557945 RMI1Q9H9A7 625 aa21.01■□□□□ 0.95
CASC4-204ENST00000557945 VPS37BQ9H9H4 285 aa21.01■□□□□ 0.95
CASC4-204ENST00000557945 APOBEC3BQ9UH17 382 aaKnown RBP21.01■□□□□ 0.95
CASC4-204ENST00000557945 DGKBQ9Y6T7 804 aa21.01■□□□□ 0.95
CASC4-204ENST00000557945 ADAMTS9Q9P2N4 1935 aa21.01■□□□□ 0.95
CASC4-204ENST00000557945 ZFHX2Q9C0A1 2572 aaPredicted RBP21.01■□□□□ 0.95
CASC4-204ENST00000557945 EP300Q09472 2414 aaPredicted RBP21.01■□□□□ 0.95
CASC4-204ENST00000557945 PCDH15Q96QU1 1955 aa21.01■□□□□ 0.95
CASC4-204ENST00000557945 PFDN6O15212 129 aa21■□□□□ 0.95
CASC4-204ENST00000557945 GRID2O43424 1007 aa21■□□□□ 0.95
CASC4-204ENST00000557945 GFRA3O60609 400 aa21■□□□□ 0.95
CASC4-204ENST00000557945 DNAJC6O75061 913 aa21■□□□□ 0.95
CASC4-204ENST00000557945 CTSEP14091 401 aa21■□□□□ 0.95
CASC4-204ENST00000557945 TGM1P22735 817 aa21■□□□□ 0.95
CASC4-204ENST00000557945 HNRNPKP61978 463 aaKnown RBP eCLIP21■□□□□ 0.95
CASC4-204ENST00000557945 B4GALNT1Q00973 533 aa21■□□□□ 0.95
CASC4-204ENST00000557945 ITIH4Q14624 930 aa21■□□□□ 0.95
CASC4-204ENST00000557945 SLMAPQ14BN4 828 aa21■□□□□ 0.95
CASC4-204ENST00000557945 CCNI2Q6ZMN8 369 aaPredicted RBP21■□□□□ 0.95
CASC4-204ENST00000557945 TRAPPC5Q8IUR0 188 aa21■□□□□ 0.95
CASC4-204ENST00000557945 NAT14Q8WUY8 206 aa21■□□□□ 0.95
CASC4-204ENST00000557945 CCDC97Q96F63 343 aaPredicted RBP21■□□□□ 0.95
CASC4-204ENST00000557945 SCARF2Q96GP6 870 aaPredicted RBP21■□□□□ 0.95
CASC4-204ENST00000557945 EDEM2Q9BV94 578 aa21■□□□□ 0.95
CASC4-204ENST00000557945 LRRC4CQ9HCJ2 640 aa21■□□□□ 0.95
CASC4-204ENST00000557945 PLXNB3Q9ULL4 1909 aa21■□□□□ 0.95
CASC4-204ENST00000557945 IGLV3-16A0A075B6K0 115 aa20.99■□□□□ 0.95
CASC4-204ENST00000557945 A0A1B0GTQ1 180 aa20.99■□□□□ 0.95
CASC4-204ENST00000557945 OR2AG2A6NM03 316 aa20.99■□□□□ 0.95
CASC4-204ENST00000557945 GPR89AB7ZAQ6 455 aa20.99■□□□□ 0.95
CASC4-204ENST00000557945 OR1I1O60431 355 aa20.99■□□□□ 0.95
CASC4-204ENST00000557945 FOXD2O60548 495 aaPredicted RBP20.99■□□□□ 0.95
CASC4-204ENST00000557945 SDC3O75056 442 aa20.99■□□□□ 0.95
CASC4-204ENST00000557945 GSTA2P09210 222 aa20.99■□□□□ 0.95
CASC4-204ENST00000557945 FAM153BP0C7A2 387 aa20.99■□□□□ 0.95
CASC4-204ENST00000557945 GPR89BP0CG08 455 aa20.99■□□□□ 0.95
CASC4-204ENST00000557945 MYBL2P10244 700 aa20.99■□□□□ 0.95
CASC4-204ENST00000557945 ATP1B2P14415 290 aaPredicted RBP20.99■□□□□ 0.95
CASC4-204ENST00000557945 OGNP20774 298 aaKnown RBP20.99■□□□□ 0.95
CASC4-204ENST00000557945 RXRGP48443 463 aa20.99■□□□□ 0.95
CASC4-204ENST00000557945 CCT8P50990 548 aa20.99■□□□□ 0.95
CASC4-204ENST00000557945 GPX6P59796 221 aa20.99■□□□□ 0.95
CASC4-204ENST00000557945 VSNL1P62760 191 aa20.99■□□□□ 0.95
CASC4-204ENST00000557945 CTBP1Q13363 440 aa20.99■□□□□ 0.95
CASC4-204ENST00000557945 FRG1Q14331 258 aaKnown RBP20.99■□□□□ 0.95
CASC4-204ENST00000557945 KYNUQ16719 465 aa20.99■□□□□ 0.95
CASC4-204ENST00000557945 FAM153CQ494X1 144 aa20.99■□□□□ 0.95
CASC4-204ENST00000557945 PYCR3Q53H96 274 aa20.99■□□□□ 0.95
CASC4-204ENST00000557945 PRRT3Q5FWE3 981 aa20.99■□□□□ 0.95
CASC4-204ENST00000557945 TMEM220Q6QAJ8 160 aa20.99■□□□□ 0.95
CASC4-204ENST00000557945 CILP2Q8IUL8 1156 aa20.99■□□□□ 0.95
CASC4-204ENST00000557945 DENND6AQ8IWF6 608 aa20.99■□□□□ 0.95
CASC4-204ENST00000557945 LMNTD2Q8IXW0 634 aa20.99■□□□□ 0.95
CASC4-204ENST00000557945 SGF29Q96ES7 293 aa20.99■□□□□ 0.95
CASC4-204ENST00000557945 OR2M4Q96R27 311 aa20.99■□□□□ 0.95
CASC4-204ENST00000557945 RXFP3Q9NSD7 469 aa20.99■□□□□ 0.95
CASC4-204ENST00000557945 NINJ2Q9NZG7 142 aa20.99■□□□□ 0.95
CASC4-204ENST00000557945 PCYT1BQ9Y5K3 369 aaPredicted RBP20.99■□□□□ 0.95
CASC4-204ENST00000557945 UBA6A0AVT1 1052 aaPredicted RBP20.98■□□□□ 0.95
CASC4-204ENST00000557945 ZNF7P17097 686 aaPredicted RBP20.98■□□□□ 0.95
CASC4-204ENST00000557945 NSG1P42857 185 aa20.98■□□□□ 0.95
CASC4-204ENST00000557945 SLC1A2P43004 574 aa20.98■□□□□ 0.95
CASC4-204ENST00000557945 CTSCP53634 463 aa20.98■□□□□ 0.95
CASC4-204ENST00000557945 MGAT5Q09328 741 aa20.98■□□□□ 0.95
CASC4-204ENST00000557945 BNIP3Q12983 259 aa20.98■□□□□ 0.95
CASC4-204ENST00000557945 C1orf61Q13536 156 aa20.98■□□□□ 0.95
CASC4-204ENST00000557945 NAA30Q147X3 362 aaPredicted RBP20.98■□□□□ 0.95
CASC4-204ENST00000557945 SHBQ15464 509 aa20.98■□□□□ 0.95
CASC4-204ENST00000557945 TYSND1Q2T9J0 566 aa20.98■□□□□ 0.95
CASC4-204ENST00000557945 PLA2G4EQ3MJ16 856 aa20.98■□□□□ 0.95
CASC4-204ENST00000557945 LRRTM4Q86VH4 590 aa20.98■□□□□ 0.95
CASC4-204ENST00000557945 RELL1Q8IUW5 271 aa20.98■□□□□ 0.95
CASC4-204ENST00000557945 LMX1AQ8TE12 382 aa20.98■□□□□ 0.95
CASC4-204ENST00000557945 TCF12Q99081 682 aa20.98■□□□□ 0.95
CASC4-204ENST00000557945 TMEM168Q9H0V1 697 aa20.98■□□□□ 0.95
CASC4-204ENST00000557945 CDC42EP4Q9H3Q1 356 aaKnown RBP20.98■□□□□ 0.95
CASC4-204ENST00000557945 MOCS1Q9NZB8 636 aa20.98■□□□□ 0.95
CASC4-204ENST00000557945 SPASTQ9UBP0 616 aa20.98■□□□□ 0.95
CASC4-204ENST00000557945 FBXO5Q9UKT4 447 aa20.98■□□□□ 0.95
CASC4-204ENST00000557945 TP53BP1Q12888 1972 aaPredicted RBP20.98■□□□□ 0.95
CASC4-204ENST00000557945 CHUKO15111 745 aa20.97■□□□□ 0.95
CASC4-204ENST00000557945 YKT6O15498 198 aa20.97■□□□□ 0.95
CASC4-204ENST00000557945 SPAG6O75602 509 aa20.97■□□□□ 0.95
CASC4-204ENST00000557945 PIAS2O75928 621 aa20.97■□□□□ 0.95
CASC4-204ENST00000557945 F7P08709 466 aaPredicted RBP20.97■□□□□ 0.95
CASC4-204ENST00000557945 ACP5P13686 325 aa20.97■□□□□ 0.95
CASC4-204ENST00000557945 MCM3P25205 808 aa20.97■□□□□ 0.95
CASC4-204ENST00000557945 RNF187Q5TA31 235 aaPredicted RBP20.97■□□□□ 0.95
CASC4-204ENST00000557945 WDR93Q6P2C0 686 aa20.97■□□□□ 0.95
CASC4-204ENST00000557945 PACS1Q6VY07 963 aa20.97■□□□□ 0.95
CASC4-204ENST00000557945 CHST15Q7LFX5 561 aaPredicted RBP20.97■□□□□ 0.95
CASC4-204ENST00000557945 CLDN19Q8N6F1 224 aa20.97■□□□□ 0.95
CASC4-204ENST00000557945 ZNF514Q96K75 400 aaPredicted RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms