RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 GPRC6AQ5T6X5 926 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 CDCP2Q5VXM1 449 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 CRTC3Q6UUV7 619 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 UNQ6494/PRO21346Q6UXR6 183 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 SNX20Q7Z614 316 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 C17orf82Q86X59 251 aaPredicted RBP12.33□□□□□ -0.44
SLIRP-211ENST00000557623 GRK7Q8WTQ7 553 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 HEXDCQ8WVB3 486 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 GATA6Q92908 595 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 CCDC74AQ96AQ1 378 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 ZNF514Q96K75 400 aaPredicted RBP12.33□□□□□ -0.44
SLIRP-211ENST00000557623 DEPDC7Q96QD5 511 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 RANBP9Q96S59 729 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 NAPGQ99747 312 aaPredicted RBP12.33□□□□□ -0.44
SLIRP-211ENST00000557623 TIMM29Q9BSF4 260 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 UGT1A7Q9HAW7 530 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 UGT1A10Q9HAW8 530 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 UGT1A8Q9HAW9 530 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 CASS4Q9NQ75 786 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 KCND1Q9NSA2 647 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 NLE1Q9NVX2 485 aaPredicted RBP12.33□□□□□ -0.44
SLIRP-211ENST00000557623 LRIT1Q9P2V4 623 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 CRLS1Q9UJA2 301 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 PRKAB1Q9Y478 270 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 PCYT1BQ9Y5K3 369 aaPredicted RBP12.33□□□□□ -0.44
SLIRP-211ENST00000557623 ST14Q9Y5Y6 855 aa12.33□□□□□ -0.44
SLIRP-211ENST00000557623 DNMT3AQ9Y6K1 912 aaPredicted RBP12.33□□□□□ -0.44
SLIRP-211ENST00000557623 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.33□□□□□ -0.44
SLIRP-211ENST00000557623 COL27A1Q8IZC6 1860 aaPredicted RBP12.33□□□□□ -0.44
SLIRP-211ENST00000557623 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.32□□□□□ -0.44
SLIRP-211ENST00000557623 CTAGE9A4FU28 777 aa12.32□□□□□ -0.44
SLIRP-211ENST00000557623 FAM149AA5PLN7 773 aa12.32□□□□□ -0.44
SLIRP-211ENST00000557623 TMEM8BA6NDV4 472 aa12.32□□□□□ -0.44
SLIRP-211ENST00000557623 MROH6A6NGR9 719 aa12.32□□□□□ -0.44
SLIRP-211ENST00000557623 OR5K4A6NMS3 321 aa12.32□□□□□ -0.44
SLIRP-211ENST00000557623 RHPN2P1A8MT19 583 aa12.32□□□□□ -0.44
SLIRP-211ENST00000557623 AGAP14A8MT82 685 aa12.32□□□□□ -0.44
SLIRP-211ENST00000557623 PHF2O75151 1096 aa12.32□□□□□ -0.44
SLIRP-211ENST00000557623 ECEL1O95672 775 aa12.32□□□□□ -0.44
SLIRP-211ENST00000557623 KRT14P02533 472 aa12.32□□□□□ -0.44
SLIRP-211ENST00000557623 RALBP11234 206 aa12.32□□□□□ -0.44
SLIRP-211ENST00000557623 ZNF7P17097 686 aaPredicted RBP12.32□□□□□ -0.44
SLIRP-211ENST00000557623 ADRA1DP25100 572 aa12.32□□□□□ -0.44
SLIRP-211ENST00000557623 AKT1P31749 480 aa12.32□□□□□ -0.44
SLIRP-211ENST00000557623 MC4RP32245 332 aa12.32□□□□□ -0.44
SLIRP-211ENST00000557623 COILP38432 576 aaPredicted RBP12.32□□□□□ -0.44
SLIRP-211ENST00000557623 FNTAP49354 379 aa12.32□□□□□ -0.44
SLIRP-211ENST00000557623 SARNPP82979 210 aaKnown RBP12.32□□□□□ -0.44
SLIRP-211ENST00000557623 TARDBPQ13148 414 aaKnown RBP eCLIP12.32□□□□□ -0.44
SLIRP-211ENST00000557623 SPIDRQ14159 915 aa12.32□□□□□ -0.44
SLIRP-211ENST00000557623 KHDC1Q4VXA5 237 aaKnown RBP12.32□□□□□ -0.44
SLIRP-211ENST00000557623 PAPD7Q5XG87 772 aaKnown RBP12.32□□□□□ -0.44
SLIRP-211ENST00000557623 CCDC137Q6PK04 289 aaKnown RBP12.32□□□□□ -0.44
SLIRP-211ENST00000557623 RBM44Q6ZP01 1051 aaKnown RBP12.32□□□□□ -0.44
SLIRP-211ENST00000557623 NLRP9Q7RTR0 991 aa12.32□□□□□ -0.44
SLIRP-211ENST00000557623 TRAPPC5Q8IUR0 188 aa12.32□□□□□ -0.44
SLIRP-211ENST00000557623 NAGSQ8N159 534 aa12.32□□□□□ -0.44
SLIRP-211ENST00000557623 ARL14Q8N4G2 192 aa12.32□□□□□ -0.44
SLIRP-211ENST00000557623 DCBLD1Q8N8Z6 715 aa12.32□□□□□ -0.44
SLIRP-211ENST00000557623 AVL9Q8NBF6 648 aa12.32□□□□□ -0.44
SLIRP-211ENST00000557623 GRAMD1AQ96CP6 724 aa12.32□□□□□ -0.44
SLIRP-211ENST00000557623 DCUN1D1Q96GG9 259 aa12.32□□□□□ -0.44
SLIRP-211ENST00000557623 CDKN2AIPNLQ96HQ2 116 aa12.32□□□□□ -0.44
SLIRP-211ENST00000557623 DNAJC1Q96KC8 554 aaKnown RBP12.32□□□□□ -0.44
SLIRP-211ENST00000557623 STN1Q9H668 368 aaKnown RBP12.32□□□□□ -0.44
SLIRP-211ENST00000557623 KLC4Q9NSK0 619 aa12.32□□□□□ -0.44
SLIRP-211ENST00000557623 PIH1D1Q9NWS0 290 aaKnown RBP12.32□□□□□ -0.44
SLIRP-211ENST00000557623 RIMKLBQ9ULI2 386 aa12.32□□□□□ -0.44
SLIRP-211ENST00000557623 KCNK6Q9Y257 313 aa12.32□□□□□ -0.44
SLIRP-211ENST00000557623 RNF215Q9Y6U7 377 aa12.32□□□□□ -0.44
SLIRP-211ENST00000557623 PIKFYVEQ9Y2I7 2098 aa12.31□□□□□ -0.44
SLIRP-211ENST00000557623 KLHL33A6NCF5 533 aa12.31□□□□□ -0.44
SLIRP-211ENST00000557623 CFAP99D6REC4 459 aa12.31□□□□□ -0.44
SLIRP-211ENST00000557623 ZNF185O15231 689 aa12.31□□□□□ -0.44
SLIRP-211ENST00000557623 F3P13726 295 aa12.31□□□□□ -0.44
SLIRP-211ENST00000557623 TPSB2P20231 275 aa12.31□□□□□ -0.44
SLIRP-211ENST00000557623 PSMA3P25788 255 aa12.31□□□□□ -0.44
SLIRP-211ENST00000557623 GPR3P46089 330 aa12.31□□□□□ -0.44
SLIRP-211ENST00000557623 NPY2RP49146 381 aa12.31□□□□□ -0.44
SLIRP-211ENST00000557623 MAZP56270 477 aaKnown RBP12.31□□□□□ -0.44
SLIRP-211ENST00000557623 CACNG1Q06432 222 aa12.31□□□□□ -0.44
SLIRP-211ENST00000557623 GPS1Q13098 491 aa12.31□□□□□ -0.44
SLIRP-211ENST00000557623 TPSAB1Q15661 275 aa12.31□□□□□ -0.44
SLIRP-211ENST00000557623 ZRANB3Q5FWF4 1079 aa12.31□□□□□ -0.44
SLIRP-211ENST00000557623 TTC27Q6P3X3 843 aa12.31□□□□□ -0.44
SLIRP-211ENST00000557623 ZNF438Q7Z4V0 828 aa12.31□□□□□ -0.44
SLIRP-211ENST00000557623 CCNJLQ8IV13 435 aa12.31□□□□□ -0.44
SLIRP-211ENST00000557623 RASGEF1AQ8N9B8 481 aa12.31□□□□□ -0.44
SLIRP-211ENST00000557623 PPHLN1Q8NEY8 458 aaKnown RBP12.31□□□□□ -0.44
SLIRP-211ENST00000557623 PEX13Q92968 403 aa12.31□□□□□ -0.44
SLIRP-211ENST00000557623 CNTNAP3BQ96NU0 1288 aa12.31□□□□□ -0.44
SLIRP-211ENST00000557623 CNTNAP3Q9BZ76 1288 aa12.31□□□□□ -0.44
SLIRP-211ENST00000557623 LRRN3Q9H3W5 708 aa12.31□□□□□ -0.44
SLIRP-211ENST00000557623 OSGEPL1Q9H4B0 414 aa12.31□□□□□ -0.44
SLIRP-211ENST00000557623 BFARQ9NZS9 450 aa12.31□□□□□ -0.44
SLIRP-211ENST00000557623 SAR1BQ9Y6B6 198 aa12.31□□□□□ -0.44
SLIRP-211ENST00000557623 UNC13CQ8NB66 2214 aa12.31□□□□□ -0.44
SLIRP-211ENST00000557623 KIR2DS5A0A0G2JLQ3 304 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 A0A0G2JNG1 304 aa12.3□□□□□ -0.44
SLIRP-211ENST00000557623 C1QTNF9BB2RNN3 333 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms