RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 C14orf28Q4W4Y0 310 aa8.23□□□□□ -1.09
PSEN1-223ENST00000557511 PYCR3Q53H96 274 aa8.23□□□□□ -1.09
PSEN1-223ENST00000557511 HES3Q5TGS1 186 aa8.23□□□□□ -1.09
PSEN1-223ENST00000557511 GUSBP11Q6P575 273 aa8.23□□□□□ -1.09
PSEN1-223ENST00000557511 CCDC137Q6PK04 289 aaKnown RBP8.23□□□□□ -1.09
PSEN1-223ENST00000557511 CRTC3Q6UUV7 619 aa8.23□□□□□ -1.09
PSEN1-223ENST00000557511 TAS2R42Q7RTR8 314 aa8.23□□□□□ -1.09
PSEN1-223ENST00000557511 TMPRSS7Q7RTY8 843 aa8.23□□□□□ -1.09
PSEN1-223ENST00000557511 ADGRG6Q86SQ4 1221 aa8.23□□□□□ -1.09
PSEN1-223ENST00000557511 SLC9B2Q86UD5 537 aa8.23□□□□□ -1.09
PSEN1-223ENST00000557511 TRAPPC5Q8IUR0 188 aa8.23□□□□□ -1.09
PSEN1-223ENST00000557511 TRIM48Q8IWZ4 208 aa8.23□□□□□ -1.09
PSEN1-223ENST00000557511 SLC35F3Q8IY50 421 aa8.23□□□□□ -1.09
PSEN1-223ENST00000557511 PRELID2Q8N945 189 aa8.23□□□□□ -1.09
PSEN1-223ENST00000557511 OR52K1Q8NGK4 314 aa8.23□□□□□ -1.09
PSEN1-223ENST00000557511 SH3KBP1Q96B97 665 aa8.23□□□□□ -1.09
PSEN1-223ENST00000557511 EID2BQ96D98 161 aa8.23□□□□□ -1.09
PSEN1-223ENST00000557511 TRIM44Q96DX7 344 aaPredicted RBP8.23□□□□□ -1.09
PSEN1-223ENST00000557511 SCARF2Q96GP6 870 aaPredicted RBP8.23□□□□□ -1.09
PSEN1-223ENST00000557511 DEPDC7Q96QD5 511 aa8.23□□□□□ -1.09
PSEN1-223ENST00000557511 WDR24Q96S15 920 aa8.23□□□□□ -1.09
PSEN1-223ENST00000557511 VPS37BQ9H9H4 285 aa8.23□□□□□ -1.09
PSEN1-223ENST00000557511 IL26Q9NPH9 171 aa8.23□□□□□ -1.09
PSEN1-223ENST00000557511 EIF2B3Q9NR50 452 aaKnown RBP8.23□□□□□ -1.09
PSEN1-223ENST00000557511 AKAP7Q9P0M2 348 aaPredicted RBP8.23□□□□□ -1.09
PSEN1-223ENST00000557511 ATXN10Q9UBB4 475 aa8.23□□□□□ -1.09
PSEN1-223ENST00000557511 RNF14Q9UBS8 474 aa8.23□□□□□ -1.09
PSEN1-223ENST00000557511 ANAPC5Q9UJX4 755 aa8.23□□□□□ -1.09
PSEN1-223ENST00000557511 CLCA2Q9UQC9 943 aa8.23□□□□□ -1.09
PSEN1-223ENST00000557511 SAR1BQ9Y6B6 198 aa8.23□□□□□ -1.09
PSEN1-223ENST00000557511 SPTBN4Q9H254 2564 aa8.23□□□□□ -1.09
PSEN1-223ENST00000557511 ASCC3Q8N3C0 2202 aaKnown RBP8.23□□□□□ -1.09
PSEN1-223ENST00000557511 TMEM131Q92545 1883 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 KLHL33A6NCF5 533 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 PDZK1P1A8MUH7 402 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 TMX2-CTNND1H3BSU7 103 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 MEN1O00255 615 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 PFDN6O15212 129 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 NUDT21O43809 227 aaKnown RBP8.22□□□□□ -1.09
PSEN1-223ENST00000557511 OPA1O60313 960 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 UGT1A9O60656 530 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 DNAJC6O75061 913 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 PHF2O75151 1096 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 MTX2O75431 263 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 TCEA3O75764 348 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 SUN1O94901 812 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 ZSCAN5DPP0CG00 497 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 GIMD1P0DJR0 217 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 MYF5P13349 255 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 ETS1P14921 441 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 ZNF7P17097 686 aaPredicted RBP8.22□□□□□ -1.09
PSEN1-223ENST00000557511 ZNF8P17098 575 aaPredicted RBP8.22□□□□□ -1.09
PSEN1-223ENST00000557511 UGT1A6P19224 532 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 SPINK2P20155 84 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 IDSP22304 550 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 UGT1A1P22309 533 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 UGT1A4P22310 534 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 ADRA1DP25100 572 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 AK4P27144 223 aaPredicted RBP8.22□□□□□ -1.09
PSEN1-223ENST00000557511 CASQ1P31415 396 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 MC4RP32245 332 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 UGT1A3P35503 534 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 UGT1A5P35504 534 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 COILP38432 576 aaPredicted RBP8.22□□□□□ -1.09
PSEN1-223ENST00000557511 HALP42357 657 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 NPY2RP49146 381 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 FNTAP49354 379 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 VPS41P49754 854 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 PRAMEP78395 509 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 GPS1Q13098 491 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 NFATC2Q13469 925 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 OLIG2Q13516 323 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 SIX1Q15475 284 aaPredicted RBP8.22□□□□□ -1.09
PSEN1-223ENST00000557511 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.22□□□□□ -1.09
PSEN1-223ENST00000557511 OXLD1Q5BKU9 147 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 AARS2Q5JTZ9 985 aaKnown RBP8.22□□□□□ -1.09
PSEN1-223ENST00000557511 LYPLAL1Q5VWZ2 237 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 KCTD11Q693B1 232 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 DENND5AQ6IQ26 1287 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 OGFOD3Q6PK18 319 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 RBM44Q6ZP01 1051 aaKnown RBP8.22□□□□□ -1.09
PSEN1-223ENST00000557511 SNX20Q7Z614 316 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 KLHDC8BQ8IXV7 354 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 Q8N9G6 341 aaPredicted RBP8.22□□□□□ -1.09
PSEN1-223ENST00000557511 KYQ8NBH2 561 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 DDHD1Q8NEL9 900 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 GPR156Q8NFN8 814 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 OR13C4Q8NGS5 318 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 CCL4L1Q8NHW4 92 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 CCDC74AQ96AQ1 378 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 GRAMD1AQ96CP6 724 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 AHCYL2Q96HN2 611 aaKnown RBP8.22□□□□□ -1.09
PSEN1-223ENST00000557511 MS4A14Q96JA4 679 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 GFM1Q96RP9 751 aaKnown RBP8.22□□□□□ -1.09
PSEN1-223ENST00000557511 COPS8Q99627 209 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 CCDC3Q9BQI4 270 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 GORASP1Q9BQQ3 440 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 TIMM29Q9BSF4 260 aa8.22□□□□□ -1.09
PSEN1-223ENST00000557511 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.22□□□□□ -1.09
PSEN1-223ENST00000557511 UGT1A7Q9HAW7 530 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms