RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 KIR3DL1P43629 444 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 RGRP47804 291 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 CDH6P55285 790 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 INSM1Q01101 510 aaPredicted RBP9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 SLC25A11Q02978 314 aaKnown RBP9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 SLC10A7Q0GE19 358 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 EIF2B5Q13144 721 aaKnown RBP9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 TARDBPQ13148 414 aaKnown RBP eCLIP9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 TRIM14Q14142 442 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 RTP5Q14D33 572 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 SLC18A3Q16572 532 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 SMTNL2Q2TAL5 461 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 WSCD2Q2TBF2 565 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 RALGPS1Q5JS13 557 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 LRRC73Q5JTD7 316 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 HES3Q5TGS1 186 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 SPECC1LQ69YQ0 1117 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 MACC1Q6ZN28 852 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 ARHGAP36Q6ZRI8 547 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 SDR16C5Q8N3Y7 309 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 DCBLD1Q8N8Z6 715 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 ZNF548Q8NEK5 533 aaPredicted RBP9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 OR8K1Q8NGG5 319 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 MDM1Q8TC05 714 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 NSMCE1Q8WV22 266 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 SMURF1Q9HCE7 757 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 PCDH18Q9HCL0 1135 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 MBNL1Q9NR56 388 aaKnown RBP9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 UVRAGQ9P2Y5 699 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 NENFQ9UMX5 172 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 CLCA2Q9UQC9 943 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 TDRD6O60522 2096 aaKnown RBP9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 ASPMQ8IZT6 3477 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 USP24Q9UPU5 2620 aa9.84□□□□□ -0.83
HNRNPC-228ENST00000557033 SPEGQ15772 3267 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 ARID1BQ8NFD5 2236 aaPredicted RBP9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 CACNA1BQ00975 2339 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 SSU72P8A0A1W2PR75 194 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 TRAFD1O14545 582 aaPredicted RBP9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 MUSKO15146 869 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 PIP5K1CO60331 668 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 SOCS5O75159 536 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 HOXC4P09017 264 aaPredicted RBP9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 TPM1P09493 284 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 H2AFZP0C0S5 128 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 TCF4P15884 667 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 CR2P20023 1033 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 MMP12P39900 470 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 SSR1P43307 286 aaKnown RBP9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 PREPP48147 710 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 PPARDQ03181 441 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 LSAMPQ13449 338 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 KRT81Q14533 505 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 ZNF235Q14590 738 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 PDK2Q15119 407 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 IRF4Q15306 451 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 ASTE1Q2TB18 679 aaPredicted RBP9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 TPRG1LQ5T0D9 272 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 FAXCQ5TGI0 409 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 MARC1Q5VT66 337 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 TXNRD3NBQ6F5E7 133 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 LVRNQ6Q4G3 990 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 H2AFVQ71UI9 128 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 ZSWIM9Q86XI8 627 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 MARCH9Q86YJ5 346 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 MAP7D3Q8IWC1 876 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 TP53INP2Q8IXH6 220 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 AGGF1Q8N302 714 aaeCLIP9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 LMX1AQ8TE12 382 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 NXPE2Q96DL1 559 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 TCTN2Q96GX1 697 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 NUDCD1Q96RS6 583 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 IL12RB2Q99665 862 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 APOOQ9BUR5 198 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 ETNK2Q9NVF9 386 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 ZNHIT6Q9NWK9 470 aaKnown RBP9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 KCTD5Q9NXV2 234 aa9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 APOBEC3BQ9UH17 382 aaKnown RBP9.83□□□□□ -0.84
HNRNPC-228ENST00000557033 WDFY3Q8IZQ1 3526 aa9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 DMXL2Q8TDJ6 3036 aa9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 TRBV23OR9-2A0A075B6M9 112 aa9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 EME2A4GXA9 379 aaPredicted RBP9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 LMO7DNF2Z398 122 aa9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 HTRA2O43464 458 aaPredicted RBP9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 NEBLO76041 1014 aa9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 PROSCO94903 275 aa9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 CBX7O95931 251 aa9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 MT-CO3P00414 261 aa9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 KRT7P08729 469 aa9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 PPM1FP49593 454 aaPredicted RBP9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 ARSEP51690 589 aa9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 ADKP55263 362 aaKnown RBP9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 RALGDSQ12967 914 aa9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 MTM1Q13496 603 aa9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 NFATC4Q14934 902 aa9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 PAFAH1B3Q15102 231 aaKnown RBP9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 PRRT3Q5FWE3 981 aa9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 SFRP5Q5T4F7 317 aa9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 LIPIQ6XZB0 460 aa9.82□□□□□ -0.84
HNRNPC-228ENST00000557033 FRMD7Q6ZUT3 714 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms