RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 GABRB3P28472 473 aa17.2■□□□□ 0.34
TUBB3-211ENST00000556536 PHBP35232 272 aa17.2■□□□□ 0.34
TUBB3-211ENST00000556536 DPP6P42658 865 aa17.2■□□□□ 0.34
TUBB3-211ENST00000556536 TTPAP49638 278 aa17.2■□□□□ 0.34
TUBB3-211ENST00000556536 EIF2B5Q13144 721 aaKnown RBP17.2■□□□□ 0.34
TUBB3-211ENST00000556536 PTK2BQ14289 1009 aa17.2■□□□□ 0.34
TUBB3-211ENST00000556536 ITIH4Q14624 930 aa17.2■□□□□ 0.34
TUBB3-211ENST00000556536 DUOXA1Q1HG43 343 aa17.2■□□□□ 0.34
TUBB3-211ENST00000556536 ALG11Q2TAA5 492 aa17.2■□□□□ 0.34
TUBB3-211ENST00000556536 KIF19Q2TAC6 998 aa17.2■□□□□ 0.34
TUBB3-211ENST00000556536 KBTBD12Q3ZCT8 623 aa17.2■□□□□ 0.34
TUBB3-211ENST00000556536 ZNF449Q6P9G9 518 aa17.2■□□□□ 0.34
TUBB3-211ENST00000556536 DET1Q7L5Y6 550 aa17.2■□□□□ 0.34
TUBB3-211ENST00000556536 DCP2Q8IU60 420 aaKnown RBP17.2■□□□□ 0.34
TUBB3-211ENST00000556536 LMNTD2Q8IXW0 634 aa17.2■□□□□ 0.34
TUBB3-211ENST00000556536 OR56A4Q8NGH8 313 aa17.2■□□□□ 0.34
TUBB3-211ENST00000556536 LPGAT1Q92604 370 aa17.2■□□□□ 0.34
TUBB3-211ENST00000556536 TSACCQ96A04 125 aaPredicted RBP17.2■□□□□ 0.34
TUBB3-211ENST00000556536 TCF12Q99081 682 aa17.2■□□□□ 0.34
TUBB3-211ENST00000556536 CAPN10Q9HC96 672 aa17.2■□□□□ 0.34
TUBB3-211ENST00000556536 ZFATQ9P243 1243 aa17.2■□□□□ 0.34
TUBB3-211ENST00000556536 SNX11Q9Y5W9 270 aa17.2■□□□□ 0.34
TUBB3-211ENST00000556536 PSAT1Q9Y617 370 aa17.2■□□□□ 0.34
TUBB3-211ENST00000556536 PRSS21Q9Y6M0 314 aa17.2■□□□□ 0.34
TUBB3-211ENST00000556536 TPRP12270 2363 aaKnown RBP17.2■□□□□ 0.34
TUBB3-211ENST00000556536 SCAMP1O15126 338 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 SGTAO43765 313 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 VEGFDO43915 354 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 NDUFS3O75489 264 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 CDK14O94921 469 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 HAUS5O94927 633 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 RETP07949 1114 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 ABHD2P08910 425 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 KELP23276 732 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 HSD17B3P37058 310 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 CTSKP43235 329 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 ABCG1P45844 678 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 CTSCP53634 463 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 SLC29A2Q14542 456 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 BRD3Q15059 726 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 ZNF542PQ5EBM4 170 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 TRIM61Q5EBN2 209 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 PLA2G2CQ5R387 149 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 PRAMEF14Q5SWL7 426 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 PACS1Q6VY07 963 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 RBFAQ8N0V3 343 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 CLDN19Q8N6F1 224 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 CEP76Q8TAP6 659 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 UBLCP1Q8WVY7 318 aaPredicted RBP17.19■□□□□ 0.34
TUBB3-211ENST00000556536 SKA1Q96BD8 255 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 SGF29Q96ES7 293 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 PDXPQ96GD0 296 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 DCUN1D1Q96GG9 259 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 TTC1Q99614 292 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 ACSS3Q9H6R3 686 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 VPS18Q9P253 973 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 KLQ9UEF7 1012 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 KLF15Q9UIH9 416 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 MOSPD1Q9UJG1 213 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 CDV3Q9UKY7 258 aaKnown RBP17.19■□□□□ 0.34
TUBB3-211ENST00000556536 PRKAB1Q9Y478 270 aa17.19■□□□□ 0.34
TUBB3-211ENST00000556536 TNRC6BQ9UPQ9 1833 aaKnown RBP17.19■□□□□ 0.34
TUBB3-211ENST00000556536 GPR179Q6PRD1 2367 aa17.18■□□□□ 0.34
TUBB3-211ENST00000556536 A0A087WUV0 522 aaPredicted RBP17.18■□□□□ 0.34
TUBB3-211ENST00000556536 PRSS38A1L453 326 aa17.18■□□□□ 0.34
TUBB3-211ENST00000556536 TNFRSF10CO14798 259 aa17.18■□□□□ 0.34
TUBB3-211ENST00000556536 NUAK1O60285 661 aa17.18■□□□□ 0.34
TUBB3-211ENST00000556536 MAGEC1O60732 1142 aa17.18■□□□□ 0.34
TUBB3-211ENST00000556536 DNAJC6O75061 913 aa17.18■□□□□ 0.34
TUBB3-211ENST00000556536 AHSGP02765 367 aa17.18■□□□□ 0.34
TUBB3-211ENST00000556536 ATP1B2P14415 290 aaPredicted RBP17.18■□□□□ 0.34
TUBB3-211ENST00000556536 LEPRP48357 1165 aaKnown RBP17.18■□□□□ 0.34
TUBB3-211ENST00000556536 SRP54P61011 504 aaKnown RBP17.18■□□□□ 0.34
TUBB3-211ENST00000556536 RNF187Q5TA31 235 aaPredicted RBP17.18■□□□□ 0.34
TUBB3-211ENST00000556536 TCEAL6Q6IPX3 200 aa17.18■□□□□ 0.34
TUBB3-211ENST00000556536 SLC23A3Q6PIS1 610 aa17.18■□□□□ 0.34
TUBB3-211ENST00000556536 CNSTQ6PJW8 725 aa17.18■□□□□ 0.34
TUBB3-211ENST00000556536 KIAA0408Q6ZU52 694 aa17.18■□□□□ 0.34
TUBB3-211ENST00000556536 RABEPKQ7Z6M1 372 aa17.18■□□□□ 0.34
TUBB3-211ENST00000556536 STRA8Q7Z7C7 330 aa17.18■□□□□ 0.34
TUBB3-211ENST00000556536 PARGQ86W56 976 aa17.18■□□□□ 0.34
TUBB3-211ENST00000556536 CTAGE3PQ8IX95 158 aa17.18■□□□□ 0.34
TUBB3-211ENST00000556536 PPM1NQ8N819 430 aa17.18■□□□□ 0.34
TUBB3-211ENST00000556536 HEXDCQ8WVB3 486 aa17.18■□□□□ 0.34
TUBB3-211ENST00000556536 TCEAL3Q969E4 200 aa17.18■□□□□ 0.34
TUBB3-211ENST00000556536 SCARF2Q96GP6 870 aaPredicted RBP17.18■□□□□ 0.34
TUBB3-211ENST00000556536 RTKNQ9BST9 563 aa17.18■□□□□ 0.34
TUBB3-211ENST00000556536 ZCCHC2Q9C0B9 1178 aaKnown RBP17.18■□□□□ 0.34
TUBB3-211ENST00000556536 P2RY12Q9H244 342 aa17.18■□□□□ 0.34
TUBB3-211ENST00000556536 TCEAL2Q9H3H9 227 aaPredicted RBP17.18■□□□□ 0.34
TUBB3-211ENST00000556536 CYP4F12Q9HCS2 524 aa17.18■□□□□ 0.34
TUBB3-211ENST00000556536 INTS10Q9NVR2 710 aaKnown RBP17.18■□□□□ 0.34
TUBB3-211ENST00000556536 SUFUQ9UMX1 484 aa17.18■□□□□ 0.34
TUBB3-211ENST00000556536 SLC6A14Q9UN76 642 aa17.18■□□□□ 0.34
TUBB3-211ENST00000556536 CRYL1Q9Y2S2 319 aa17.18■□□□□ 0.34
TUBB3-211ENST00000556536 CEP192Q8TEP8 1941 aa17.17■□□□□ 0.34
TUBB3-211ENST00000556536 SDK1Q7Z5N4 2213 aa17.17■□□□□ 0.34
TUBB3-211ENST00000556536 UBA6A0AVT1 1052 aaPredicted RBP17.17■□□□□ 0.34
TUBB3-211ENST00000556536 CCDC151A5D8V7 595 aa17.17■□□□□ 0.34
TUBB3-211ENST00000556536 OR2AG2A6NM03 316 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms