RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 FAM151BQ6UXP7 276 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 DEPDC4Q8N2C3 294 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 ZBTB8BQ8NAP8 495 aaPredicted RBP14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 C20orf27Q9GZN8 174 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 PCDHB9Q9Y5E1 797 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 ARL5AQ9Y689 179 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 TBKBP1A7MCY6 615 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 ZNF99A8MXY4 864 aaPredicted RBP14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 PRMT5O14744 637 aaPredicted RBP14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 IL12RB1P42701 662 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 ST8SIA6P61647 398 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 ZNF284Q2VY69 593 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 AHSA2Q719I0 299 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 TMBIM1Q969X1 311 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 PSME2Q9UL46 239 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 CXCR6O00574 342 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 RSL1D1O76021 490 aaKnown RBP14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 NDST2P52849 883 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 RBM48Q5RL73 367 aaKnown RBP14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 HID1Q8IV36 788 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 SCAMP5Q8TAC9 235 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 TMEM159Q96B96 161 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 PHF21AQ96BD5 680 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 GMLQ99445 158 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 OLFM1Q99784 485 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 RAPGEFL1Q9UHV5 662 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 G3V2L1 256 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 FAM72CH0Y354 149 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 SCAMP3O14828 347 aaKnown RBP14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 TFPTP0C1Z6 253 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 CD52P31358 61 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 HSPA7P48741 367 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 HUNKP57058 714 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 MOGQ16653 247 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 FAM72AQ5TYM5 149 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 FAM72DQ6L9T8 149 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 FAM72BQ86X60 149 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 SIDT2Q8NBJ9 832 aaKnown RBP14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 MFSD1Q9H3U5 465 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 NUDT4Q9NZJ9 180 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 GMIPQ9P107 970 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 DNMT3LQ9UJW3 386 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 BCORQ6W2J9 1755 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 OGNP20774 298 aaKnown RBP14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 CES1P23141 567 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 PBX3P40426 434 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 ELAVL2Q12926 359 aaKnown RBP14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 CTU1Q7Z7A3 348 aaKnown RBP14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 BRSK1Q8TDC3 778 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 ZUFSPQ96AP4 578 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 VPS35Q96QK1 796 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 ACBD6Q9BR61 282 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 IRAK2O43187 625 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 TLR5O60602 858 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 ARHGAP1Q07960 439 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 MED22Q15528 200 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 PAQR3Q6TCH7 311 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 CIR1Q86X95 450 aaPredicted RBP14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 CPNE9Q8IYJ1 553 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 SLC13A3Q8WWT9 602 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 CENPIQ92674 756 aaPredicted RBP14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 TMEM74Q96NL1 305 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 HAPLN3Q96S86 360 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 RNF39Q9H2S5 420 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 TBCCD1Q9NVR7 557 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 EMCNQ9ULC0 261 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 FAM25AB3EWG3 89 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 FAM25CB3EWG5 89 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 FAM25GB3EWG6 89 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 FOXM1Q08050 763 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 CAMK2GQ13555 558 aaPredicted RBP14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 GTF2H2Q13888 395 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 FAM174BQ3ZCQ3 159 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 GTF2H2CQ6P1K8 395 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 RNF19BQ6ZMZ0 732 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 OSTM1Q86WC4 334 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 C2CD4AQ8NCU7 369 aaPredicted RBP14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 OR13C4Q8NGS5 318 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 FNDC8Q8TC99 324 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 NSMCE3Q96MG7 304 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 TMEM209Q96SK2 561 aa14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 TMA7Q9Y2S6 64 aaKnown RBP14.89□□□□□ -0.03
ARHGEF40-207ENST00000556399 SUV39H1O43463 412 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 IGSF6O95976 241 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 ALDH9A1P49189 494 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 FAM117BQ6P1L5 589 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 RBFAQ8N0V3 343 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 ZNF420Q8TAQ5 688 aaPredicted RBP14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 OSBPL2Q9H1P3 480 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 CLN6Q9NWW5 311 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 CACNG4Q9UBN1 327 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 TTC24A2A3L6 582 aaPredicted RBP14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 PRR23D1E9PI22 279 aaPredicted RBP14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 PRR23D2P0DMB1 279 aaPredicted RBP14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 ZNF182P17025 639 aaPredicted RBP14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 SLC16A1P53985 500 aa14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 PURAQ00577 322 aaKnown RBP14.88□□□□□ -0.03
ARHGEF40-207ENST00000556399 SPIBQ01892 262 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms