RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 MAP7Q14244 749 aa18.54■□□□□ 0.56
CDKN3-209ENST00000556102 LRRC38Q5VT99 294 aa18.54■□□□□ 0.56
CDKN3-209ENST00000556102 CCDC70Q6NSX1 233 aa18.54■□□□□ 0.56
CDKN3-209ENST00000556102 RHOT2Q8IXI1 618 aa18.54■□□□□ 0.56
CDKN3-209ENST00000556102 UNC5BQ8IZJ1 945 aa18.54■□□□□ 0.56
CDKN3-209ENST00000556102 GLOD4Q9HC38 313 aa18.54■□□□□ 0.56
CDKN3-209ENST00000556102 ZNF624Q9P2J8 865 aaPredicted RBP18.54■□□□□ 0.56
CDKN3-209ENST00000556102 DNAJC16Q9Y2G8 782 aa18.54■□□□□ 0.56
CDKN3-209ENST00000556102 PDZK1P1A8MUH7 402 aa18.53■□□□□ 0.56
CDKN3-209ENST00000556102 ARHGAP6O43182 974 aa18.53■□□□□ 0.56
CDKN3-209ENST00000556102 MT-CYBP00156 380 aaPredicted RBP18.53■□□□□ 0.56
CDKN3-209ENST00000556102 PRKAR1AP10644 381 aa18.53■□□□□ 0.56
CDKN3-209ENST00000556102 TYRP1P17643 537 aa18.53■□□□□ 0.56
CDKN3-209ENST00000556102 CDC20Q12834 499 aa18.53■□□□□ 0.56
CDKN3-209ENST00000556102 TEX44Q53QW1 395 aa18.53■□□□□ 0.56
CDKN3-209ENST00000556102 ODF2Q5BJF6 829 aa18.53■□□□□ 0.56
CDKN3-209ENST00000556102 ABRAXAS1Q6UWZ7 409 aa18.53■□□□□ 0.56
CDKN3-209ENST00000556102 ESX1Q8N693 406 aa18.53■□□□□ 0.56
CDKN3-209ENST00000556102 SPATA22Q8NHS9 363 aa18.53■□□□□ 0.56
CDKN3-209ENST00000556102 VPS35Q96QK1 796 aa18.53■□□□□ 0.56
CDKN3-209ENST00000556102 POT1Q9NUX5 634 aa18.53■□□□□ 0.56
CDKN3-209ENST00000556102 SLC30A1Q9Y6M5 507 aa18.53■□□□□ 0.56
CDKN3-209ENST00000556102 A0A0A6YYK5 440 aaPredicted RBP18.52■□□□□ 0.56
CDKN3-209ENST00000556102 TOX3O15405 576 aaPredicted RBP18.52■□□□□ 0.56
CDKN3-209ENST00000556102 MTX2O75431 263 aa18.52■□□□□ 0.56
CDKN3-209ENST00000556102 CDK14O94921 469 aa18.52■□□□□ 0.56
CDKN3-209ENST00000556102 AMD1P17707 334 aa18.52■□□□□ 0.56
CDKN3-209ENST00000556102 STAT5AP42229 794 aa18.52■□□□□ 0.56
CDKN3-209ENST00000556102 DYNLT1P63172 113 aa18.52■□□□□ 0.56
CDKN3-209ENST00000556102 MC1RQ01726 317 aa18.52■□□□□ 0.56
CDKN3-209ENST00000556102 FOXM1Q08050 763 aa18.52■□□□□ 0.56
CDKN3-209ENST00000556102 SEPT7Q16181 437 aaKnown RBP18.52■□□□□ 0.56
CDKN3-209ENST00000556102 KHDC1Q4VXA5 237 aaKnown RBP18.52■□□□□ 0.56
CDKN3-209ENST00000556102 WASH2PQ6VEQ5 465 aa18.52■□□□□ 0.56
CDKN3-209ENST00000556102 B4GALNT4Q76KP1 1039 aa18.52■□□□□ 0.56
CDKN3-209ENST00000556102 PTRH1Q86Y79 214 aaKnown RBP18.52■□□□□ 0.56
CDKN3-209ENST00000556102 ZNF547Q8IVP9 402 aa18.52■□□□□ 0.56
CDKN3-209ENST00000556102 STARD8Q92502 1023 aa18.52■□□□□ 0.56
CDKN3-209ENST00000556102 COL26A1Q96A83 441 aa18.52■□□□□ 0.56
CDKN3-209ENST00000556102 RNF25Q96BH1 459 aaPredicted RBP18.52■□□□□ 0.56
CDKN3-209ENST00000556102 TEKT5Q96M29 485 aa18.52■□□□□ 0.56
CDKN3-209ENST00000556102 TGM7Q96PF1 710 aa18.52■□□□□ 0.56
CDKN3-209ENST00000556102 ANP32EQ9BTT0 268 aa18.52■□□□□ 0.56
CDKN3-209ENST00000556102 WASH6PQ9NQA3 447 aa18.52■□□□□ 0.56
CDKN3-209ENST00000556102 SPTLC3Q9NUV7 552 aa18.52■□□□□ 0.56
CDKN3-209ENST00000556102 DDX56Q9NY93 547 aaKnown RBP18.52■□□□□ 0.56
CDKN3-209ENST00000556102 TMPRSS11EQ9UL52 423 aa18.52■□□□□ 0.56
CDKN3-209ENST00000556102 SPO11Q9Y5K1 396 aa18.52■□□□□ 0.56
CDKN3-209ENST00000556102 PTPN13Q12923 2485 aa18.52■□□□□ 0.56
CDKN3-209ENST00000556102 AURKAO14965 403 aa18.51■□□□□ 0.55
CDKN3-209ENST00000556102 CBFA2T2O43439 604 aa18.51■□□□□ 0.55
CDKN3-209ENST00000556102 PMPCBO75439 489 aa18.51■□□□□ 0.55
CDKN3-209ENST00000556102 BRAFP15056 766 aa18.51■□□□□ 0.55
CDKN3-209ENST00000556102 IDSP22304 550 aa18.51■□□□□ 0.55
CDKN3-209ENST00000556102 PTPN3P26045 913 aa18.51■□□□□ 0.55
CDKN3-209ENST00000556102 OAS2P29728 719 aaKnown RBP18.51■□□□□ 0.55
CDKN3-209ENST00000556102 SLC1A1P43005 524 aa18.51■□□□□ 0.55
CDKN3-209ENST00000556102 TLE1Q04724 770 aa18.51■□□□□ 0.55
CDKN3-209ENST00000556102 PRKD1Q15139 912 aaPredicted RBP18.51■□□□□ 0.55
CDKN3-209ENST00000556102 ATP13A5Q4VNC0 1218 aa18.51■□□□□ 0.55
CDKN3-209ENST00000556102 CRTC2Q53ET0 693 aaPredicted RBP18.51■□□□□ 0.55
CDKN3-209ENST00000556102 AGAP9Q5VTM2 703 aa18.51■□□□□ 0.55
CDKN3-209ENST00000556102 MFSD7Q6UXD7 560 aa18.51■□□□□ 0.55
CDKN3-209ENST00000556102 BZW1Q7L1Q6 419 aaKnown RBP18.51■□□□□ 0.55
CDKN3-209ENST00000556102 RHOT1Q8IXI2 618 aa18.51■□□□□ 0.55
CDKN3-209ENST00000556102 RBM12BQ8IXT5 1001 aaKnown RBP18.51■□□□□ 0.55
CDKN3-209ENST00000556102 CCDC42Q96M95 316 aa18.51■□□□□ 0.55
CDKN3-209ENST00000556102 CHP1Q99653 195 aa18.51■□□□□ 0.55
CDKN3-209ENST00000556102 ZNF768Q9H5H4 540 aaKnown RBP18.51■□□□□ 0.55
CDKN3-209ENST00000556102 BPIFA1Q9NP55 256 aa18.51■□□□□ 0.55
CDKN3-209ENST00000556102 ABHD10Q9NUJ1 306 aa18.51■□□□□ 0.55
CDKN3-209ENST00000556102 RPS6KL1Q9Y6S9 549 aa18.51■□□□□ 0.55
CDKN3-209ENST00000556102 TPM1P09493 284 aa18.5■□□□□ 0.55
CDKN3-209ENST00000556102 VCLP18206 1134 aa18.5■□□□□ 0.55
CDKN3-209ENST00000556102 TCN2P20062 427 aa18.5■□□□□ 0.55
CDKN3-209ENST00000556102 RPL10P27635 214 aaKnown RBP18.5■□□□□ 0.55
CDKN3-209ENST00000556102 HMGCLP35914 325 aa18.5■□□□□ 0.55
CDKN3-209ENST00000556102 CAPZBP47756 277 aa18.5■□□□□ 0.55
CDKN3-209ENST00000556102 LEPRP48357 1165 aaKnown RBP18.5■□□□□ 0.55
CDKN3-209ENST00000556102 NR2C2P49116 596 aa18.5■□□□□ 0.55
CDKN3-209ENST00000556102 SEPHS1P49903 392 aa18.5■□□□□ 0.55
CDKN3-209ENST00000556102 GTF2H3Q13889 308 aa18.5■□□□□ 0.55
CDKN3-209ENST00000556102 C11orf96Q7Z7L8 435 aa18.5■□□□□ 0.55
CDKN3-209ENST00000556102 TRAPPC5Q8IUR0 188 aa18.5■□□□□ 0.55
CDKN3-209ENST00000556102 C9orf43Q8TAL5 461 aaPredicted RBP18.5■□□□□ 0.55
CDKN3-209ENST00000556102 RSC1A1Q92681 617 aa18.5■□□□□ 0.55
CDKN3-209ENST00000556102 ULBP3Q9BZM4 244 aa18.5■□□□□ 0.55
CDKN3-209ENST00000556102 TRABDQ9H4I3 376 aa18.5■□□□□ 0.55
CDKN3-209ENST00000556102 NHEJ1Q9H9Q4 299 aaPredicted RBP18.5■□□□□ 0.55
CDKN3-209ENST00000556102 UBP1Q9NZI7 540 aa18.5■□□□□ 0.55
CDKN3-209ENST00000556102 FAM153AQ9UHL3 310 aa18.5■□□□□ 0.55
CDKN3-209ENST00000556102 MAST4O15021 2626 aa18.5■□□□□ 0.55
CDKN3-209ENST00000556102 OR52A4PA6NMU1 304 aa18.49■□□□□ 0.55
CDKN3-209ENST00000556102 RASSF9O75901 435 aa18.49■□□□□ 0.55
CDKN3-209ENST00000556102 TNNT1P13805 278 aa18.49■□□□□ 0.55
CDKN3-209ENST00000556102 ZNF28P17035 718 aa18.49■□□□□ 0.55
CDKN3-209ENST00000556102 CD68P34810 354 aaPredicted RBP18.49■□□□□ 0.55
CDKN3-209ENST00000556102 DRG2P55039 364 aaKnown RBP18.49■□□□□ 0.55
CDKN3-209ENST00000556102 TMEM115Q12893 351 aaPredicted RBP18.49■□□□□ 0.55
CDKN3-209ENST00000556102 TFDP2Q14188 446 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms