RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	MGAM	O43451	1857 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029		A0A0U1RQF3	1178 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	TTC24	A2A3L6	582 aa	Predicted RBP	12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	CHRNA4	P43681	627 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	ST13	P50502	369 aa	Known RBP	12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	C1D	Q13901	141 aa	Known RBP	12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	GALNT3	Q14435	633 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	UGT3A1	Q6NUS8	523 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	TRMT11	Q7Z4G4	463 aa	Known RBP	12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	RBM23	Q86U06	439 aa	Known RBP	12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	IZUMO1	Q8IYV9	350 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	TXNDC5	Q8NBS9	432 aa	Known RBP	12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	DNAJC1	Q96KC8	554 aa	Known RBP	12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	PPP1R2P1	Q96PQ5	205 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	MTIF3	Q9H2K0	278 aa	Known RBP	12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	LYVE1	Q9Y5Y7	322 aa		12.2	□□□□□ -0.46
TMPO-212	ENST00000556029	DENR	O43583	198 aa	Known RBP	12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	LRAT	O95237	230 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	KRT6A	P02538	564 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	KRT6B	P04259	564 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	IGFBP6	P24592	240 aa	Predicted RBP	12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	AQP1	P29972	269 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	GRIA2	P42262	883 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	KRT6C	P48668	564 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	SEMA3B	Q13214	749 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	SQLE	Q14534	574 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	CPSF6	Q16630	551 aa	Known RBP eCLIP	12.19	□□□□□ -0.46	1e-8	■■■■■ 32.5
TMPO-212	ENST00000556029	IL23R	Q5VWK5	629 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	CNST	Q6PJW8	725 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	RPS27L	Q71UM5	84 aa	Known RBP	12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	CUZD1	Q86UP6	607 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	OSCP1	Q8WVF1	389 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	C1QTNF1	Q9BXJ1	281 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	PRKD2	Q9BZL6	878 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	CREBZF	Q9NS37	354 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	UXT	Q9UBK9	157 aa	Predicted RBP	12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	UBA2	Q9UBT2	640 aa	Predicted RBP	12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	MYOCOS	A0A1B0GUC4	107 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029		A0A1B0GVG6	124 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029		I6L893	689 aa	Predicted RBP	12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	PTGES	O14684	152 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	SEC24A	O95486	1093 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	LTA4H	P09960	611 aa	Known RBP	12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	GABRB3	P28472	473 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	WNT3A	P56704	352 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	LPIN1	Q14693	890 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	NADK2	Q4G0N4	442 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	TIGD2	Q4W5G0	525 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	C17orf99	Q6UX52	265 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	DPP10	Q8N608	796 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	HTRA1	Q92743	480 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	FCRL5	Q96RD9	977 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	C9orf16	Q9BUW7	83 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	EPS8L2	Q9H6S3	715 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	TOR4A	Q9NXH8	423 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	ZNF624	Q9P2J8	865 aa	Predicted RBP	12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	ANAPC2	Q9UJX6	822 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	SNRPB2	P08579	225 aa	Known RBP	12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	CHRM5	P08912	532 aa	Predicted RBP	12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	S100A3	P33764	101 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	IL12RB1	P42701	662 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	GRM2	Q14416	872 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	LINGO4	Q6UY18	593 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	PHACTR4	Q8IZ21	702 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	LSMEM2	Q8N112	164 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	SLC39A8	Q9C0K1	460 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	MRPL17	Q9NRX2	175 aa	Known RBP	12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	KLHL3	Q9UH77	587 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	SLC9A8	Q9Y2E8	581 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	DGKB	Q9Y6T7	804 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	SDHD	O14521	159 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	IPO13	O94829	963 aa	Known RBP	12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	FCGR1A	P12314	374 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	KDM1B	Q8NB78	822 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	LRTOMT	Q8WZ04	291 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	LPGAT1	Q92604	370 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	PHF12	Q96QT6	1004 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	ZFYVE1	Q9HBF4	777 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	SPAG4	Q9NPE6	437 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	RASSF1	Q9NS23	344 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	SLC25A13	Q9UJS0	675 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	DNMT3L	Q9UJW3	386 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029	VPS9D1	Q9Y2B5	631 aa		12.19	□□□□□ -0.46
TMPO-212	ENST00000556029		E7ENX8	843 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	PSMD11	O00231	422 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	GABRD	O14764	452 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	RAD51B	O15315	384 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	CAPN15	O75808	1086 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	SLC10A3	P09131	477 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	LINC00032	P0C843	101 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	CKB	P12277	381 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	RPS6KA3	P51812	740 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	RBM20	Q5T481	1227 aa	Known RBP	12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	ELMSAN1	Q6PJG2	1045 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	SLC22A9	Q8IVM8	553 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	ZMIZ2	Q8NF64	920 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	ST13P5	Q8NFI4	369 aa	Predicted RBP	12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	COL26A1	Q96A83	441 aa		12.18	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms