RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 DNAAF2Q9NVR5 837 aaKnown RBP12.53□□□□□ -0.4
SYNE2-219ENST00000555323 TRNAU1APQ9NX07 287 aaKnown RBP12.53□□□□□ -0.4
SYNE2-219ENST00000555323 KLQ9UEF7 1012 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 RAB21Q9UL25 225 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 OTOGLQ3ZCN5 2332 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 KNL1Q8NG31 2342 aa12.53□□□□□ -0.4
SYNE2-219ENST00000555323 PCDH15Q96QU1 1955 aa12.52□□□□□ -0.4
SYNE2-219ENST00000555323 TCRBV9S1A1TA0A576 114 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 CFAP99D6REC4 459 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 CDX4O14627 284 aaPredicted RBP12.52□□□□□ -0.41
SYNE2-219ENST00000555323 GRID2O43424 1007 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 PCDHGA12O60330 932 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 KCNJ13O60928 360 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 AP2A2O94973 939 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 S1PR4O95977 384 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 FAM153BP0C7A2 387 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 ERVK-10P10266 1014 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 ATP1B2P14415 290 aaPredicted RBP12.52□□□□□ -0.41
SYNE2-219ENST00000555323 ZNF7P17097 686 aaPredicted RBP12.52□□□□□ -0.41
SYNE2-219ENST00000555323 JUNDP17535 347 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 RPS3P23396 243 aaKnown RBP eCLIP12.52□□□□□ -0.41
SYNE2-219ENST00000555323 LEPRP48357 1165 aaKnown RBP12.52□□□□□ -0.41
SYNE2-219ENST00000555323 ARRB1P49407 418 aaPredicted RBP12.52□□□□□ -0.41
SYNE2-219ENST00000555323 VSNL1P62760 191 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 MGAT5Q09328 741 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 SF3A2Q15428 464 aaKnown RBP12.52□□□□□ -0.41
SYNE2-219ENST00000555323 KYNUQ16719 465 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 FAM153CQ494X1 144 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 BCL7AQ4VC05 210 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 PRAMEF14Q5SWL7 426 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 RNF187Q5TA31 235 aaPredicted RBP12.52□□□□□ -0.41
SYNE2-219ENST00000555323 PRR23CQ6ZRP0 262 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 KIAA0408Q6ZU52 694 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 C11orf96Q7Z7L8 435 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 LDB1Q86U70 411 aaPredicted RBP12.52□□□□□ -0.41
SYNE2-219ENST00000555323 HID1Q8IV36 788 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 ZNF547Q8IVP9 402 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 PHACTR4Q8IZ21 702 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 RBFAQ8N0V3 343 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 PNPLA1Q8N8W4 532 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 C2CD4AQ8NCU7 369 aaPredicted RBP12.52□□□□□ -0.41
SYNE2-219ENST00000555323 GABPB2Q8TAK5 448 aaPredicted RBP12.52□□□□□ -0.41
SYNE2-219ENST00000555323 PDXPQ96GD0 296 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 DCUN1D1Q96GG9 259 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 FAM167BQ9BTA0 163 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 BOCQ9BWV1 1114 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 PARD6BQ9BYG5 372 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 P2RY12Q9H244 342 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 CDC42EP4Q9H3Q1 356 aaKnown RBP12.52□□□□□ -0.41
SYNE2-219ENST00000555323 GAREM1Q9H706 876 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 CYP4F12Q9HCS2 524 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 ARFGAP3Q9NP61 516 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 INTS10Q9NVR2 710 aaKnown RBP12.52□□□□□ -0.41
SYNE2-219ENST00000555323 DNAJC28Q9NX36 388 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 NINJ2Q9NZG7 142 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 IL1RAPL1Q9NZN1 696 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 FBXO5Q9UKT4 447 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 SUFUQ9UMX1 484 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 VPS9D1Q9Y2B5 631 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 PCDHGB2Q9Y5G2 931 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 PCYT1BQ9Y5K3 369 aaPredicted RBP12.52□□□□□ -0.41
SYNE2-219ENST00000555323 CSNK1G3Q9Y6M4 447 aa12.52□□□□□ -0.41
SYNE2-219ENST00000555323 KLHL33A6NCF5 533 aa12.51□□□□□ -0.41
SYNE2-219ENST00000555323 PRR19A6NJB7 356 aa12.51□□□□□ -0.41
SYNE2-219ENST00000555323 FAM159BA6NKW6 160 aa12.51□□□□□ -0.41
SYNE2-219ENST00000555323 H3BM21 787 aa12.51□□□□□ -0.41
SYNE2-219ENST00000555323 QSOX1O00391 747 aa12.51□□□□□ -0.41
SYNE2-219ENST00000555323 PRMT5O14744 637 aaPredicted RBP12.51□□□□□ -0.41
SYNE2-219ENST00000555323 PFDN6O15212 129 aa12.51□□□□□ -0.41
SYNE2-219ENST00000555323 OR1I1O60431 355 aa12.51□□□□□ -0.41
SYNE2-219ENST00000555323 NDUFS3O75489 264 aa12.51□□□□□ -0.41
SYNE2-219ENST00000555323 PIAS2O75928 621 aa12.51□□□□□ -0.41
SYNE2-219ENST00000555323 PMLP29590 882 aa12.51□□□□□ -0.41
SYNE2-219ENST00000555323 CLCNKAP51800 687 aa12.51□□□□□ -0.41
SYNE2-219ENST00000555323 CTSCP53634 463 aa12.51□□□□□ -0.41
SYNE2-219ENST00000555323 SLC14A1Q13336 389 aa12.51□□□□□ -0.41
SYNE2-219ENST00000555323 CTBP1Q13363 440 aa12.51□□□□□ -0.41
SYNE2-219ENST00000555323 GTF2H3Q13889 308 aa12.51□□□□□ -0.41
SYNE2-219ENST00000555323 LRP8Q14114 963 aa12.51□□□□□ -0.41
SYNE2-219ENST00000555323 ZNF542PQ5EBM4 170 aa12.51□□□□□ -0.41
SYNE2-219ENST00000555323 DOK6Q6PKX4 331 aa12.51□□□□□ -0.41
SYNE2-219ENST00000555323 TMEM220Q6QAJ8 160 aa12.51□□□□□ -0.41
SYNE2-219ENST00000555323 TRMT10CQ7L0Y3 403 aaKnown RBP12.51□□□□□ -0.41
SYNE2-219ENST00000555323 KANSL1Q7Z3B3 1105 aa12.51□□□□□ -0.41
SYNE2-219ENST00000555323 LRRTM4Q86VH4 590 aa12.51□□□□□ -0.41
SYNE2-219ENST00000555323 LRRC6Q86X45 466 aa12.51□□□□□ -0.41
SYNE2-219ENST00000555323 DENND6AQ8IWF6 608 aa12.51□□□□□ -0.41
SYNE2-219ENST00000555323 MINDY1Q8N5J2 469 aa12.51□□□□□ -0.41
SYNE2-219ENST00000555323 GPBAR1Q8TDU6 330 aa12.51□□□□□ -0.41
SYNE2-219ENST00000555323 SAP25Q8TEE9 199 aa12.51□□□□□ -0.41
SYNE2-219ENST00000555323 LPGAT1Q92604 370 aa12.51□□□□□ -0.41
SYNE2-219ENST00000555323 SGF29Q96ES7 293 aa12.51□□□□□ -0.41
SYNE2-219ENST00000555323 CCDC97Q96F63 343 aaPredicted RBP12.51□□□□□ -0.41
SYNE2-219ENST00000555323 SLC13A1Q9BZW2 595 aa12.51□□□□□ -0.41
SYNE2-219ENST00000555323 TCEAL2Q9H3H9 227 aaPredicted RBP12.51□□□□□ -0.41
SYNE2-219ENST00000555323 CARS2Q9HA77 564 aaKnown RBP12.51□□□□□ -0.41
SYNE2-219ENST00000555323 RXFP3Q9NSD7 469 aa12.51□□□□□ -0.41
SYNE2-219ENST00000555323 IARS2Q9NSE4 1012 aaKnown RBP12.51□□□□□ -0.41
SYNE2-219ENST00000555323 SPASTQ9UBP0 616 aa12.51□□□□□ -0.41
SYNE2-219ENST00000555323 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms