RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 SRP54P61011 504 aaKnown RBP10.8□□□□□ -0.68
SHMT2-218ENST00000555213 IFFO1Q0D2I5 559 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 SLC14A1Q13336 389 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 NFATC2Q13469 925 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 PTPRCAPQ14761 206 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 SUZ12Q15022 739 aaKnown RBP10.8□□□□□ -0.68
SHMT2-218ENST00000555213 CHRNA6Q15825 494 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 GPR33Q49SQ1 333 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 AARS2Q5JTZ9 985 aaKnown RBP10.8□□□□□ -0.68
SHMT2-218ENST00000555213 SPANXN3Q5MJ09 141 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 LDLRAP1Q5SW96 308 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 TSTD2Q5T7W7 516 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 TEDDM1Q5T9Z0 273 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 KCTD16Q68DU8 428 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 SH2D5Q6ZV89 423 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 SNX20Q7Z614 316 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 EXOC3L1Q86VI1 746 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 HID1Q8IV36 788 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 PHACTR4Q8IZ21 702 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 PELI3Q8N2H9 469 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 SLC44A1Q8WWI5 657 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 TBATAQ96M53 351 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 CYTH2Q99418 400 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 AGAP2Q99490 1192 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 TTC1Q99614 292 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 ACBD3Q9H3P7 528 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 ASB8Q9H765 288 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 IL1RAPL1Q9NZN1 696 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 SLC17A6Q9P2U8 582 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 SPASTQ9UBP0 616 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 SLC24A2Q9UI40 661 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 MOSPD1Q9UJG1 213 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 CDV3Q9UKY7 258 aaKnown RBP10.8□□□□□ -0.68
SHMT2-218ENST00000555213 NOVA2Q9UNW9 492 aaKnown RBP10.8□□□□□ -0.68
SHMT2-218ENST00000555213 SLC17A4Q9Y2C5 497 aa10.8□□□□□ -0.68
SHMT2-218ENST00000555213 PCDH15Q96QU1 1955 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 EXOC1LA0A1B0GW35 172 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 PRSS38A1L453 326 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 NEMP2A6NFY4 417 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 SMIM23A6NLE4 172 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 H7C0S8 307 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 PCDHGA12O60330 932 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 TNFP01375 233 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 POLBP06746 335 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 ERVK-10P10266 1014 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 CTSEP14091 401 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 GABRB3P28472 473 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 PHBP35232 272 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 PPARGP37231 505 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-218ENST00000555213 RXRGP48443 463 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 ARSDP51689 593 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 HK3P52790 923 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 LIMK1P53667 647 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 ACVR1Q04771 509 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 CACNG1Q06432 222 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 ALG11Q2TAA5 492 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 UAP1L1Q3KQV9 507 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 ATP13A5Q4VNC0 1218 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 ZRANB3Q5FWF4 1079 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 TPRG1LQ5T0D9 272 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 STPG1Q5TH74 334 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 ZNF449Q6P9G9 518 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 RD3Q7Z3Z2 195 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 TRIM74Q86UV6 250 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 GALNT13Q8IUC8 556 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 FSTL5Q8N475 847 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-218ENST00000555213 DDHD1Q8NEL9 900 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 OR13J1Q8NGT2 312 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 OR2I1PQ8NGU4 316 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 OR6P1Q8NGX9 317 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 ZNF398Q8TD17 642 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 HEXDCQ8WVB3 486 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 PDXPQ96GD0 296 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 DCUN1D1Q96GG9 259 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 COX14Q96I36 57 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 CCDC77Q9BR77 488 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 LGR4Q9BXB1 951 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 RMI1Q9H9A7 625 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 CARS2Q9HA77 564 aaKnown RBP10.79□□□□□ -0.68
SHMT2-218ENST00000555213 FGF22Q9HCT0 170 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 TM7SF3Q9NS93 570 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 PCDHGB2Q9Y5G2 931 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 PSAT1Q9Y617 370 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 DGKBQ9Y6T7 804 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 LRRK1Q38SD2 2015 aa10.79□□□□□ -0.68
SHMT2-218ENST00000555213 A0A1W2PPM1 405 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 TMEM202A6NGA9 273 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 C4orf47A7E2U8 309 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 F8W8V4 182 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 CCL22O00626 93 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 PFDN6O15212 129 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 FLRT2O43155 660 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 VEGFDO43915 354 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 CDH16O75309 829 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 PIAS2O75928 621 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 IVLP07476 585 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 F7P08709 466 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-218ENST00000555213 ALPPL2P10696 532 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 MSH3P20585 1137 aa10.78□□□□□ -0.68
SHMT2-218ENST00000555213 STX2P32856 288 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms