RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 GALNT7Q86SF2 657 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 RYBPQ8N488 228 aaPredicted RBP17.25■□□□□ 0.35
SHOX-204ENST00000554971 RANBP9Q96S59 729 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 APOL2Q9BQE5 337 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 RTKNQ9BST9 563 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 GATA5Q9BWX5 397 aaPredicted RBP17.25■□□□□ 0.35
SHOX-204ENST00000554971 VPS45Q9NRW7 570 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 OTOGLQ3ZCN5 2332 aa17.25■□□□□ 0.35
SHOX-204ENST00000554971 CFAP54Q96N23 3096 aa17.24■□□□□ 0.35
SHOX-204ENST00000554971 KIF1CO43896 1103 aaKnown RBP17.24■□□□□ 0.35
SHOX-204ENST00000554971 POP4O95707 220 aaKnown RBP17.24■□□□□ 0.35
SHOX-204ENST00000554971 AHSGP02765 367 aa17.24■□□□□ 0.35
SHOX-204ENST00000554971 MMP2P08253 660 aa17.24■□□□□ 0.35
SHOX-204ENST00000554971 SP9P0CG40 484 aa17.24■□□□□ 0.35
SHOX-204ENST00000554971 FNTBP49356 437 aa17.24■□□□□ 0.35
SHOX-204ENST00000554971 RPL14P50914 215 aaKnown RBP17.24■□□□□ 0.35
SHOX-204ENST00000554971 RAB10P61026 200 aa17.24■□□□□ 0.35
SHOX-204ENST00000554971 POU4F1Q01851 419 aa17.24■□□□□ 0.35
SHOX-204ENST00000554971 DSC2Q02487 901 aa17.24■□□□□ 0.35
SHOX-204ENST00000554971 IRGCQ6NXR0 463 aa17.24■□□□□ 0.35
SHOX-204ENST00000554971 KIAA1324Q6UXG2 1013 aaKnown RBP17.24■□□□□ 0.35
SHOX-204ENST00000554971 KIRREL3Q8IZU9 778 aa17.24■□□□□ 0.35
SHOX-204ENST00000554971 TMEM151AQ8N4L1 468 aa17.24■□□□□ 0.35
SHOX-204ENST00000554971 FAM160A2Q8N612 972 aaPredicted RBP17.24■□□□□ 0.35
SHOX-204ENST00000554971 TMIEQ8NEW7 156 aa17.24■□□□□ 0.35
SHOX-204ENST00000554971 RLN3Q8WXF3 142 aa17.24■□□□□ 0.35
SHOX-204ENST00000554971 SEMA3CQ99985 751 aa17.24■□□□□ 0.35
SHOX-204ENST00000554971 CCDC28BQ9BUN5 200 aa17.24■□□□□ 0.35
SHOX-204ENST00000554971 CPEB1Q9BZB8 566 aaKnown RBP17.24■□□□□ 0.35
SHOX-204ENST00000554971 POLR1EQ9GZS1 481 aaKnown RBP17.24■□□□□ 0.35
SHOX-204ENST00000554971 SLC25A51Q9H1U9 297 aa17.24■□□□□ 0.35
SHOX-204ENST00000554971 TREX1Q9NSU2 369 aa17.24■□□□□ 0.35
SHOX-204ENST00000554971 USP36Q9P275 1121 aaKnown RBP17.24■□□□□ 0.35
SHOX-204ENST00000554971 DMXL1Q9Y485 3027 aa17.24■□□□□ 0.35
SHOX-204ENST00000554971 GOLGA8QA0A0J9YX86 632 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 GOLGA8OA6NCC3 632 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 GOLGA8NF8WBI6 632 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 NEBLO76041 1014 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 UGT2B4P06133 528 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 THRAP10827 490 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 STMN1P16949 149 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 TPMTP51580 245 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 NUBP1P53384 320 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 TCF15Q12870 199 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 NCEH1Q6PIU2 408 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 ZSWIM9Q86XI8 627 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 CAMK1DQ8IU85 385 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 PGBD3Q8N328 593 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 CPSF7Q8N684 471 aaKnown RBP17.23■□□□□ 0.35
SHOX-204ENST00000554971 ZNF781Q8N8C0 355 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 C2CD4AQ8NCU7 369 aaPredicted RBP17.23■□□□□ 0.35
SHOX-204ENST00000554971 PRSS33Q8NF86 280 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 FBXO27Q8NI29 283 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 SCG3Q8WXD2 468 aaKnown RBP17.23■□□□□ 0.35
SHOX-204ENST00000554971 ARRDC3Q96B67 414 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 PANX3Q96QZ0 392 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 CAB39LQ9H9S4 337 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 UBP1Q9NZI7 540 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 CCDC163A0A0D9SF12 145 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 TARM1B6A8C7 271 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 AXIN1O15169 862 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 NPHS1O60500 1241 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 PRNPP04156 253 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 SLC35E2BP0CK96 405 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 KLC1Q07866 573 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 MAP7D1Q3KQU3 841 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 ZNF528Q3MIS6 628 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 SEL1L3Q68CR1 1132 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 ATG14Q6ZNE5 492 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 BBS5Q8N3I7 341 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 IPMKQ8NFU5 416 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 FAM131CQ96AQ9 280 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 CCDC126Q96EE4 140 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 ATXN7L3BQ96GX2 97 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 FICDQ9BVA6 458 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 FSD1LQ9BXM9 530 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 TCF7L2Q9NQB0 619 aa17.23■□□□□ 0.35
SHOX-204ENST00000554971 RUVBL2Q9Y230 463 aaKnown RBP17.23■□□□□ 0.35
SHOX-204ENST00000554971 PI4KAP42356 2102 aa17.22■□□□□ 0.35
SHOX-204ENST00000554971 A0A1W2PP55 124 aa17.22■□□□□ 0.35
SHOX-204ENST00000554971 HEATR9A2RTY3 570 aa17.22■□□□□ 0.35
SHOX-204ENST00000554971 KPNA3O00505 521 aaPredicted RBP17.22■□□□□ 0.35
SHOX-204ENST00000554971 RNASEH1O60930 286 aaKnown RBP17.22■□□□□ 0.35
SHOX-204ENST00000554971 ADH1BP00325 375 aa17.22■□□□□ 0.35
SHOX-204ENST00000554971 ANPEPP15144 967 aa17.22■□□□□ 0.35
SHOX-204ENST00000554971 NCF2P19878 526 aaPredicted RBP17.22■□□□□ 0.35
SHOX-204ENST00000554971 DNAJB13P59910 316 aa17.22■□□□□ 0.35
SHOX-204ENST00000554971 IRF9Q00978 393 aa17.22■□□□□ 0.35
SHOX-204ENST00000554971 NAPRTQ6XQN6 538 aa17.22■□□□□ 0.35
SHOX-204ENST00000554971 ACAD11Q709F0 780 aa17.22■□□□□ 0.35
SHOX-204ENST00000554971 DSG4Q86SJ6 1040 aa17.22■□□□□ 0.35
SHOX-204ENST00000554971 ZBTB44Q8NCP5 570 aa17.22■□□□□ 0.35
SHOX-204ENST00000554971 SPATA22Q8NHS9 363 aa17.22■□□□□ 0.35
SHOX-204ENST00000554971 LRIG1Q96JA1 1093 aa17.22■□□□□ 0.35
SHOX-204ENST00000554971 MRPL57Q9BQC6 102 aaKnown RBP17.22■□□□□ 0.35
SHOX-204ENST00000554971 ITM2CQ9NQX7 267 aa17.22■□□□□ 0.35
SHOX-204ENST00000554971 NDE1Q9NXR1 346 aa17.22■□□□□ 0.35
SHOX-204ENST00000554971 PCDHGC4Q9Y5F7 938 aa17.22■□□□□ 0.35
SHOX-204ENST00000554971 SPEGQ15772 3267 aa17.22■□□□□ 0.35
SHOX-204ENST00000554971 A6NHS1 94 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms