RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 FKBP6O75344 327 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 ZMPSTE24O75844 475 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 CDK4P11802 303 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 AP1S1P61966 158 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 PTPRRQ15256 657 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 IMPG1Q17R60 797 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 INSCQ1MX18 579 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 ZNF789Q5FWF6 425 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 TJAP1Q5JTD0 557 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 ENDOVQ8N8Q3 282 aaKnown RBP16.44■□□□□ 0.22
PCNX1-209ENST00000554879 SKA1Q96BD8 255 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 DEC1Q9P2X7 70 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 VIPR2P41587 438 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 OGFOD2Q6N063 350 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 CES5AQ6NT32 575 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 DCAF4L2Q8NA75 395 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 ESAMQ96AP7 390 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 ZDHHC4Q9NPG8 344 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 KCNK4Q9NYG8 393 aa16.44■□□□□ 0.22
PCNX1-209ENST00000554879 EIF3FO00303 357 aaPredicted RBP16.43■□□□□ 0.22
PCNX1-209ENST00000554879 SMAD6O43541 496 aaKnown RBP16.43■□□□□ 0.22
PCNX1-209ENST00000554879 SERPINB1P30740 379 aa16.43■□□□□ 0.22
PCNX1-209ENST00000554879 TTLL9Q3SXZ7 439 aa16.43■□□□□ 0.22
PCNX1-209ENST00000554879 ARL13AQ5H913 290 aaPredicted RBP16.43■□□□□ 0.22
PCNX1-209ENST00000554879 LDLRAP1Q5SW96 308 aa16.43■□□□□ 0.22
PCNX1-209ENST00000554879 MANEALQ5VSG8 457 aa16.43■□□□□ 0.22
PCNX1-209ENST00000554879 DCBLD1Q8N8Z6 715 aa16.43■□□□□ 0.22
PCNX1-209ENST00000554879 ACVR1CQ8NER5 493 aa16.43■□□□□ 0.22
PCNX1-209ENST00000554879 ANK1P16157 1881 aa16.43■□□□□ 0.22
PCNX1-209ENST00000554879 CLDN7O95471 211 aa16.43■□□□□ 0.22
PCNX1-209ENST00000554879 MSX2P35548 267 aaPredicted RBP16.43■□□□□ 0.22
PCNX1-209ENST00000554879 CD97P48960 835 aa16.43■□□□□ 0.22
PCNX1-209ENST00000554879 RPL14P50914 215 aaKnown RBP16.43■□□□□ 0.22
PCNX1-209ENST00000554879 RELAQ04206 551 aa16.43■□□□□ 0.22
PCNX1-209ENST00000554879 ULK2Q8IYT8 1036 aa16.43■□□□□ 0.22
PCNX1-209ENST00000554879 TRPC4APQ8TEL6 797 aa16.43■□□□□ 0.22
PCNX1-209ENST00000554879 SUSD6Q92537 303 aa16.43■□□□□ 0.22
PCNX1-209ENST00000554879 LINGO1Q96FE5 620 aa16.43■□□□□ 0.22
PCNX1-209ENST00000554879 NSMCE3Q96MG7 304 aa16.43■□□□□ 0.22
PCNX1-209ENST00000554879 GPR22Q99680 433 aa16.43■□□□□ 0.22
PCNX1-209ENST00000554879 ZBP1Q9H171 429 aa16.43■□□□□ 0.22
PCNX1-209ENST00000554879 IL1RL2Q9HB29 575 aa16.43■□□□□ 0.22
PCNX1-209ENST00000554879 CCL26Q9Y258 94 aa16.43■□□□□ 0.22
PCNX1-209ENST00000554879 PCDH8O95206 1070 aa16.43■□□□□ 0.22
PCNX1-209ENST00000554879 CHRNGP07510 517 aa16.43■□□□□ 0.22
PCNX1-209ENST00000554879 PKMP14618 531 aaKnown RBP16.43■□□□□ 0.22
PCNX1-209ENST00000554879 TMEM240Q5SV17 173 aa16.43■□□□□ 0.22
PCNX1-209ENST00000554879 KDELC1Q6UW63 502 aa16.43■□□□□ 0.22
PCNX1-209ENST00000554879 RPS27LQ71UM5 84 aaKnown RBP16.43■□□□□ 0.22
PCNX1-209ENST00000554879 PGBD5Q8N414 524 aa16.43■□□□□ 0.22
PCNX1-209ENST00000554879 TDRD15B5MCY1 1934 aaKnown RBP16.43■□□□□ 0.22
PCNX1-209ENST00000554879 WASH4PA8MWX3 477 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 H2AFYO75367 372 aaKnown RBP16.42■□□□□ 0.22
PCNX1-209ENST00000554879 ADH1CP00326 375 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 PROCP04070 461 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 DGKGP49619 791 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 ECT2LQ008S8 904 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 TAF1AQ15573 450 aaPredicted RBP16.42■□□□□ 0.22
PCNX1-209ENST00000554879 MBLAC2Q68D91 279 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 NEK10Q6ZWH5 1172 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 ZNF781Q8N8C0 355 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 ZNF398Q8TD17 642 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 EBF4Q9BQW3 602 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 CRISPLD2Q9H0B8 497 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 NIPSNAP2O75323 286 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 FGF19O95750 216 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 OAS1P00973 400 aaKnown RBP16.42■□□□□ 0.22
PCNX1-209ENST00000554879 F11P03951 625 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 PABPC4LP0CB38 370 aaKnown RBP16.42■□□□□ 0.22
PCNX1-209ENST00000554879 NRG1Q02297 640 aaPredicted RBP16.42■□□□□ 0.22
PCNX1-209ENST00000554879 SPDYAQ5MJ70 313 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 KCTD11Q693B1 232 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 SCIMPQ6UWF3 145 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 GPSM1Q86YR5 675 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 SLC22A9Q8IVM8 553 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 OR2AP1Q8NGE2 309 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 ZNF236Q9UL36 1845 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 RNF103-CHMP3A0A140T963 221 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 PSMD11O00231 422 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 ALDH1A2O94788 518 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 PITRM1Q5JRX3 1037 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 XKR5Q6UX68 686 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 SPNS2Q8IVW8 549 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 CLDN19Q8N6F1 224 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 TSPAN14Q8NG11 270 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 CITED4Q96RK1 184 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 SYCE1LA8MT33 242 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 IQCF5A8MTL0 148 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 INPP4BO15327 924 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 ZBTB14O43829 449 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 CCNT2O60583 730 aaKnown RBP16.42■□□□□ 0.22
PCNX1-209ENST00000554879 VNN2O95498 520 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 ATXN8OSP0DMR3 200 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 HOXD9P28356 352 aaPredicted RBP16.42■□□□□ 0.22
PCNX1-209ENST00000554879 MAGEA3P43357 314 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 CCR10P46092 362 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 COPAP53621 1224 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 PLOD1Q02809 727 aaPredicted RBP16.42■□□□□ 0.22
PCNX1-209ENST00000554879 SPIDRQ14159 915 aa16.42■□□□□ 0.22
PCNX1-209ENST00000554879 CILP2Q8IUL8 1156 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms