RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 CCDC90BQ9GZT6 254 aa15.53■□□□□ 0.08
SYNE3-203ENST00000554873 BFARQ9NZS9 450 aa15.53■□□□□ 0.08
SYNE3-203ENST00000554873 KLHL8Q9P2G9 620 aaPredicted RBP15.53■□□□□ 0.08
SYNE3-203ENST00000554873 NUP50Q9UKX7 468 aa15.53■□□□□ 0.08
SYNE3-203ENST00000554873 BBIP1A8MTZ0 92 aa15.53■□□□□ 0.08
SYNE3-203ENST00000554873 SOAT2O75908 522 aa15.53■□□□□ 0.08
SYNE3-203ENST00000554873 MYL3P08590 195 aa15.53■□□□□ 0.08
SYNE3-203ENST00000554873 PGGT1BP53609 377 aa15.53■□□□□ 0.08
SYNE3-203ENST00000554873 CERCAMQ5T4B2 595 aa15.53■□□□□ 0.08
SYNE3-203ENST00000554873 OTUD1Q5VV17 481 aaPredicted RBP15.53■□□□□ 0.08
SYNE3-203ENST00000554873 TRAF7Q6Q0C0 670 aa15.53■□□□□ 0.08
SYNE3-203ENST00000554873 FBXL6Q8N531 539 aa15.53■□□□□ 0.08
SYNE3-203ENST00000554873 AURKBQ96GD4 344 aaPredicted RBP15.53■□□□□ 0.08
SYNE3-203ENST00000554873 MRPL9Q9BYD2 267 aaKnown RBP15.53■□□□□ 0.08
SYNE3-203ENST00000554873 TXNRD2Q9NNW7 524 aa15.53■□□□□ 0.08
SYNE3-203ENST00000554873 ENPP3O14638 875 aa15.53■□□□□ 0.08
SYNE3-203ENST00000554873 CD4P01730 458 aa15.53■□□□□ 0.08
SYNE3-203ENST00000554873 LGALS2P05162 132 aa15.53■□□□□ 0.08
SYNE3-203ENST00000554873 ACVR2AP27037 513 aa15.53■□□□□ 0.08
SYNE3-203ENST00000554873 GTF2E2P29084 291 aaKnown RBP15.53■□□□□ 0.08
SYNE3-203ENST00000554873 EMX1Q04741 257 aaPredicted RBP15.53■□□□□ 0.08
SYNE3-203ENST00000554873 ZBTB6Q15916 424 aa15.53■□□□□ 0.08
SYNE3-203ENST00000554873 Q5BKY6 102 aa15.53■□□□□ 0.08
SYNE3-203ENST00000554873 SLC22A15Q8IZD6 547 aa15.53■□□□□ 0.08
SYNE3-203ENST00000554873 DNAAF3Q8N9W5 541 aa15.53■□□□□ 0.08
SYNE3-203ENST00000554873 SLC2A14Q8TDB8 520 aa15.53■□□□□ 0.08
SYNE3-203ENST00000554873 RNF170Q96K19 258 aa15.53■□□□□ 0.08
SYNE3-203ENST00000554873 SLC30A3Q99726 388 aa15.53■□□□□ 0.08
SYNE3-203ENST00000554873 MUC13Q9H3R2 512 aa15.53■□□□□ 0.08
SYNE3-203ENST00000554873 ITM2CQ9NQX7 267 aa15.53■□□□□ 0.08
SYNE3-203ENST00000554873 FBXL12Q9NXK8 326 aa15.53■□□□□ 0.08
SYNE3-203ENST00000554873 GJD2Q9UKL4 321 aa15.53■□□□□ 0.08
SYNE3-203ENST00000554873 TCRBV5S2A0A599 114 aa15.52■□□□□ 0.08
SYNE3-203ENST00000554873 H0Y626 953 aa15.52■□□□□ 0.08
SYNE3-203ENST00000554873 TBC1D4O60343 1298 aa15.52■□□□□ 0.08
SYNE3-203ENST00000554873 NPHS1O60500 1241 aa15.52■□□□□ 0.08
SYNE3-203ENST00000554873 PTPN3P26045 913 aa15.52■□□□□ 0.08
SYNE3-203ENST00000554873 CYP2C18P33260 490 aa15.52■□□□□ 0.08
SYNE3-203ENST00000554873 SLC9A3P48764 834 aa15.52■□□□□ 0.08
SYNE3-203ENST00000554873 ZNF45Q02386 682 aa15.52■□□□□ 0.08
SYNE3-203ENST00000554873 PAFAH1B3Q15102 231 aaKnown RBP15.52■□□□□ 0.08
SYNE3-203ENST00000554873 ZNF404Q494X3 552 aa15.52■□□□□ 0.08
SYNE3-203ENST00000554873 CRYBG2Q8N1P7 616 aa15.52■□□□□ 0.08
SYNE3-203ENST00000554873 MINDY1Q8N5J2 469 aa15.52■□□□□ 0.08
SYNE3-203ENST00000554873 CCNYL1Q8N7R7 359 aa15.52■□□□□ 0.08
SYNE3-203ENST00000554873 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.52■□□□□ 0.08
SYNE3-203ENST00000554873 SCYL1Q96KG9 808 aa15.52■□□□□ 0.08
SYNE3-203ENST00000554873 HSFY1Q96LI6 401 aa15.52■□□□□ 0.08
SYNE3-203ENST00000554873 PSKH2Q96QS6 385 aa15.52■□□□□ 0.08
SYNE3-203ENST00000554873 WDR70Q9NW82 654 aa15.52■□□□□ 0.08
SYNE3-203ENST00000554873 ANKRD6Q9Y2G4 727 aa15.52■□□□□ 0.08
SYNE3-203ENST00000554873 DNAJC25-GNG10A0A024R161 153 aa15.52■□□□□ 0.07
SYNE3-203ENST00000554873 PTGES3LE9PB15 166 aa15.52■□□□□ 0.07
SYNE3-203ENST00000554873 AP2A1O95782 977 aa15.52■□□□□ 0.07
SYNE3-203ENST00000554873 ALPLP05186 524 aa15.52■□□□□ 0.07
SYNE3-203ENST00000554873 TTLL4Q14679 1199 aa15.52■□□□□ 0.07
SYNE3-203ENST00000554873 VN1R5Q7Z5H4 357 aa15.52■□□□□ 0.07
SYNE3-203ENST00000554873 KCTD20Q7Z5Y7 419 aa15.52■□□□□ 0.07
SYNE3-203ENST00000554873 RETREG3Q86VR2 466 aa15.52■□□□□ 0.07
SYNE3-203ENST00000554873 OR9I1Q8NGQ6 314 aa15.52■□□□□ 0.07
SYNE3-203ENST00000554873 STYXQ8WUJ0 223 aa15.52■□□□□ 0.07
SYNE3-203ENST00000554873 MEAF6Q9HAF1 191 aa15.52■□□□□ 0.07
SYNE3-203ENST00000554873 CASS4Q9NQ75 786 aa15.52■□□□□ 0.07
SYNE3-203ENST00000554873 GTSE1Q9NYZ3 720 aa15.52■□□□□ 0.07
SYNE3-203ENST00000554873 OPTCQ9UBM4 332 aa15.52■□□□□ 0.07
SYNE3-203ENST00000554873 GRIP1Q9Y3R0 1128 aa15.52■□□□□ 0.07
SYNE3-203ENST00000554873 CCDC154A6NI56 674 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 FZD9O00144 591 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 SLC1A7O00341 560 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 ALOX12P18054 663 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 CYP2A7P20853 494 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 FRG1Q14331 258 aaKnown RBP15.51■□□□□ 0.07
SYNE3-203ENST00000554873 CTU2Q2VPK5 515 aaKnown RBP15.51■□□□□ 0.07
SYNE3-203ENST00000554873 SPATS1Q496A3 300 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 C5orf22Q49AR2 442 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 PXDC1Q5TGL8 231 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 BEND5Q7L4P6 421 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 NOXA1Q86UR1 476 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 FAM35AQ86V20 835 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 CLEC4FQ8N1N0 589 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 LGALS12Q96DT0 336 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 LRCH3Q96II8 777 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 VPS39Q96JC1 886 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 RDH12Q96NR8 316 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 MCMBPQ9BTE3 642 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 FAM49AQ9H0Q0 323 aaPredicted RBP15.51■□□□□ 0.07
SYNE3-203ENST00000554873 IL1RL2Q9HB29 575 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 IARS2Q9NSE4 1012 aaKnown RBP15.51■□□□□ 0.07
SYNE3-203ENST00000554873 CMTM6Q9NX76 183 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 SLC39A10Q9ULF5 831 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 FAM72CH0Y354 149 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 TRIM77I1YAP6 450 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 DCLK1O15075 740 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 DLX3O60479 287 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 PRKACAP17612 351 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 TPH1P17752 444 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 FMO4P31512 558 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 ARHGAP1Q07960 439 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 PPP1R3AQ16821 1122 aa15.51■□□□□ 0.07
SYNE3-203ENST00000554873 ESCO2Q56NI9 601 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms