RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 ARSFP54793 590 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 HPCAP84074 193 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 FOXD4Q12950 439 aaPredicted RBP3.86□□□□□ -1.79
KTN1-217ENST00000554831 CRY1Q16526 586 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 RABL3Q5HYI8 236 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 MFSD2AQ8NA29 543 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 OR13C4Q8NGS5 318 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 C12orf43Q96C57 262 aaKnown RBP3.86□□□□□ -1.79
KTN1-217ENST00000554831 ZHX1-C8orf76Q96EF9 292 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 GPATCH1Q9BRR8 931 aaKnown RBP3.86□□□□□ -1.79
KTN1-217ENST00000554831 EMILIN2Q9BXX0 1053 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 WDR12Q9GZL7 423 aaKnown RBP3.86□□□□□ -1.79
KTN1-217ENST00000554831 ROGDIQ9GZN7 287 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 TMCC3Q9ULS5 477 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 SH3BP1Q9Y3L3 701 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 U3KQV3 271 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 LAMB1P07942 1786 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 F8W810 466 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 SLC28A1O00337 649 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 AURKAO14965 403 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 ACSL4O60488 711 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 EPN2O95208 641 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 C1RP00736 705 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 C8BP07358 591 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 OR4Q2P0C623 313 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 ZNF26P17031 533 aaPredicted RBP3.86□□□□□ -1.79
KTN1-217ENST00000554831 PPIBP23284 216 aaKnown RBP3.86□□□□□ -1.79
KTN1-217ENST00000554831 SERPINA4P29622 427 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 KRT20P35900 424 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 SMAD3P84022 425 aaKnown RBP3.86□□□□□ -1.79
KTN1-217ENST00000554831 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.86□□□□□ -1.79
KTN1-217ENST00000554831 TUBA3CQ13748 450 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 FBXO48Q5FWF7 155 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 ZNF678Q5SXM1 525 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 KCTD11Q693B1 232 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 KCTD8Q6ZWB6 473 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 CEP97Q8IW35 865 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 SMG8Q8ND04 991 aaKnown RBP3.86□□□□□ -1.79
KTN1-217ENST00000554831 DNAJB8Q8NHS0 232 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 KCNJ9Q92806 393 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 HMCESQ96FZ2 354 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 SUSD3Q96L08 255 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 C1orf74Q96LT6 269 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 PANX1Q96RD7 426 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 ANKRD60Q9BZ19 345 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 CIPCQ9C0C6 399 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 NUAK2Q9H093 628 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 ADAMTS10Q9H324 1103 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 LIN28AQ9H9Z2 209 aaKnown RBP3.86□□□□□ -1.79
KTN1-217ENST00000554831 LRTM1Q9HBL6 345 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 ARMC1Q9NVT9 282 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 ADPRHL2Q9NX46 363 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 SAMD4AQ9UPU9 718 aaKnown RBP3.86□□□□□ -1.79
KTN1-217ENST00000554831 DDX60LQ5H9U9 1706 aaKnown RBP3.86□□□□□ -1.79
KTN1-217ENST00000554831 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.86□□□□□ -1.79
KTN1-217ENST00000554831 GNG14A0A1W2PPG7 69 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 G3V2T6 193 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 ZNF701M0R085 212 aaPredicted RBP3.86□□□□□ -1.79
KTN1-217ENST00000554831 STX16O14662 325 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 MAFKO60675 156 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 ATP6V1G1O75348 118 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 S1PR4O95977 384 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 GSNP06396 782 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 F7P08709 466 aaPredicted RBP3.86□□□□□ -1.79
KTN1-217ENST00000554831 TACR2P21452 398 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 POLR2LP62875 67 aaKnown RBP3.86□□□□□ -1.79
KTN1-217ENST00000554831 DUSP4Q13115 394 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 ITGA7Q13683 1181 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 SPIDRQ14159 915 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 GALNT3Q14435 633 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 ZNF846Q147U1 533 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 HIST2H2ACQ16777 129 aaPredicted RBP3.86□□□□□ -1.79
KTN1-217ENST00000554831 FAM174BQ3ZCQ3 159 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 PERM1Q5SV97 790 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 HIST2H2AA3Q6FI13 130 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 DLK2Q6UY11 383 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 ANKS3Q6ZW76 656 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 NECAB2Q7Z6G3 386 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 CTU1Q7Z7A3 348 aaKnown RBP3.86□□□□□ -1.79
KTN1-217ENST00000554831 ANKRD23Q86SG2 305 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 METTL3Q86U44 580 aaKnown RBP3.86□□□□□ -1.79
KTN1-217ENST00000554831 OR10A6Q8NH74 314 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 UTP15Q8TED0 518 aaKnown RBP3.86□□□□□ -1.79
KTN1-217ENST00000554831 NSMCE3Q96MG7 304 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 TDRD1Q9BXT4 1180 aaKnown RBP3.86□□□□□ -1.79
KTN1-217ENST00000554831 TEX12Q9BXU0 123 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 RIBC2Q9H4K1 309 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 POPDC3Q9HBV1 291 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 GMIPQ9P107 970 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 CACNG4Q9UBN1 327 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 Q9Y3F1 56 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 RAI2Q9Y5P3 530 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 KCNE2Q9Y6J6 123 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 NHSL1Q5SYE7 1610 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.86□□□□□ -1.79
KTN1-217ENST00000554831 J3KR12 359 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 INSIG1O15503 277 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 ZSCAN9O15535 394 aaPredicted RBP3.86□□□□□ -1.79
KTN1-217ENST00000554831 DNAJB5O75953 348 aa3.86□□□□□ -1.79
KTN1-217ENST00000554831 OR56A5P0C7T3 313 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms