RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 SORDQ00796 357 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 NIPAL4Q0D2K0 466 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 TRAF1Q13077 416 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 MYBPC2Q14324 1141 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 NEDD9Q14511 834 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 CRYMQ14894 314 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 DRAP1Q14919 205 aaPredicted RBP1.55□□□□□ -2.16
PRPF39-208ENST00000554785 MEA1Q16626 185 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 ZNF284Q2VY69 593 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 FSCBQ5H9T9 825 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 C1orf141Q5JVX7 400 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 DNTTIP2Q5QJE6 756 aaKnown RBP1.55□□□□□ -2.16
PRPF39-208ENST00000554785 C6orf141Q5SZD1 244 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 TMEM154Q6P9G4 183 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 SARM1Q6SZW1 724 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 Q6ZSV7 163 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 LINGO2Q7L985 606 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 HAPLN4Q86UW8 402 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 RPAP2Q8IXW5 612 aaPredicted RBP1.55□□□□□ -2.16
PRPF39-208ENST00000554785 SLC35F3Q8IY50 421 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 WDTC1Q8N5D0 677 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 ZBTB2Q8N680 514 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 BEST2Q8NFU1 509 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 HUS1BQ8NHY5 278 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 ARRDC2Q8TBH0 407 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 CD99L2Q8TCZ2 262 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 URB1-AS1Q96HZ7 61 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 ZNF479Q96JC4 524 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 TMEM68Q96MH6 324 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 CTAGE1Q96RT6 745 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 KAT14Q9H8E8 782 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 CLK4Q9HAZ1 481 aaKnown RBP1.55□□□□□ -2.16
PRPF39-208ENST00000554785 PLAC1Q9HBJ0 212 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 DDX4Q9NQI0 724 aaKnown RBP1.55□□□□□ -2.16
PRPF39-208ENST00000554785 TMEM51Q9NW97 253 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 NSMCE4AQ9NXX6 385 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 CISD1Q9NZ45 108 aaKnown RBP1.55□□□□□ -2.16
PRPF39-208ENST00000554785 CHD7Q9P2D1 2997 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 CNOT8Q9UFF9 292 aaKnown RBP1.55□□□□□ -2.16
PRPF39-208ENST00000554785 VPS28Q9UK41 221 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 MTMR6Q9Y217 621 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 SOS1Q07889 1333 aaPredicted RBP1.55□□□□□ -2.16
PRPF39-208ENST00000554785 ABCC12Q96J65 1359 aa1.55□□□□□ -2.16
PRPF39-208ENST00000554785 LAMB2P55268 1798 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 NUP98P52948 1817 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 A0A1B0GVM2 712 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 DYTNA2CJ06 578 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 C4orf47A7E2U8 309 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 AKR1B15C9JRZ8 316 aaPredicted RBP1.54□□□□□ -2.16
PRPF39-208ENST00000554785 TNFRSF13BO14836 293 aaPredicted RBP1.54□□□□□ -2.16
PRPF39-208ENST00000554785 SCAMP1O15126 338 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 ASAP2O43150 1006 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 RGS14O43566 566 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 SPRY3O43610 288 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 NDUFS3O75489 264 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 SLC25A12O75746 678 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 LCATP04180 440 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 HMOX1P09601 288 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 PIGAP37287 484 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 KCNJ4P48050 445 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 RFX2P48378 723 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 RFX5P48382 616 aaPredicted RBP1.54□□□□□ -2.16
PRPF39-208ENST00000554785 MC1RQ01726 317 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 CREB5Q02930 508 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 NAE1Q13564 534 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 CUL4AQ13619 759 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 KRT24Q2M2I5 525 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 C2orf68Q2NKX9 166 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 USP41Q3LFD5 358 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 ZSCAN23Q3MJ62 389 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 CXorf66Q5JRM2 361 aaPredicted RBP1.54□□□□□ -2.16
PRPF39-208ENST00000554785 FNBP1LQ5T0N5 605 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 GKAP1Q5VSY0 366 aaPredicted RBP1.54□□□□□ -2.16
PRPF39-208ENST00000554785 PLEKHA7Q6IQ23 1121 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 QSOX2Q6ZRP7 698 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 WDR63Q8IWG1 891 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 TTC5Q8N0Z6 440 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 MIGA1Q8NAN2 632 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 SCCPDHQ8NBX0 429 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 AGBL3Q8NEM8 1001 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 TRIB2Q92519 343 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 SGCDQ92629 289 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 ERGIC1Q969X5 290 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 NSUN4Q96CB9 384 aaKnown RBP1.54□□□□□ -2.16
PRPF39-208ENST00000554785 ARHGEF26Q96DR7 871 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 RSRC1Q96IZ7 334 aaKnown RBP1.54□□□□□ -2.16
PRPF39-208ENST00000554785 SLC41A2Q96JW4 573 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 C1orf74Q96LT6 269 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 HARBI1Q96MB7 349 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 NCAPGQ9BPX3 1015 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 FAM110AQ9BQ89 295 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 TMEM47Q9BQJ4 181 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 C1QTNF5Q9BXJ0 243 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 IFIH1Q9BYX4 1025 aaKnown RBP1.54□□□□□ -2.16
PRPF39-208ENST00000554785 RBM38Q9H0Z9 239 aaKnown RBP1.54□□□□□ -2.16
PRPF39-208ENST00000554785 CCDC68Q9H2F9 335 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 SMARCAD1Q9H4L7 1026 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 SH2D4AQ9H788 454 aa1.54□□□□□ -2.16
PRPF39-208ENST00000554785 RANGRFQ9HD47 186 aaPredicted RBP1.54□□□□□ -2.16
PRPF39-208ENST00000554785 OR6C3Q9NZP0 311 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms