RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 CCR10P46092 362 aa12.03□□□□□ -0.48
MTHFD1-207ENST00000554677 LEPRP48357 1165 aaKnown RBP12.03□□□□□ -0.48
MTHFD1-207ENST00000554677 PPM1FP49593 454 aaPredicted RBP12.03□□□□□ -0.48
MTHFD1-207ENST00000554677 TPM4P67936 248 aa12.03□□□□□ -0.48
MTHFD1-207ENST00000554677 SH3BP2P78314 561 aa12.03□□□□□ -0.48
MTHFD1-207ENST00000554677 TLE1Q04724 770 aa12.03□□□□□ -0.48
MTHFD1-207ENST00000554677 CDC20Q12834 499 aa12.03□□□□□ -0.48
MTHFD1-207ENST00000554677 PDK1Q15118 436 aa12.03□□□□□ -0.48
MTHFD1-207ENST00000554677 SLC14A2Q15849 920 aa12.03□□□□□ -0.48
MTHFD1-207ENST00000554677 SKIDA1Q1XH10 827 aa12.03□□□□□ -0.48
MTHFD1-207ENST00000554677 PLA2G4EQ3MJ16 856 aa12.03□□□□□ -0.48
MTHFD1-207ENST00000554677 TEX44Q53QW1 395 aa12.03□□□□□ -0.48
MTHFD1-207ENST00000554677 ZNF569Q5MCW4 686 aa12.03□□□□□ -0.48
MTHFD1-207ENST00000554677 ATP1A1-AS1Q5TC04 95 aa12.03□□□□□ -0.48
MTHFD1-207ENST00000554677 PDPK2PQ6A1A2 396 aa12.03□□□□□ -0.48
MTHFD1-207ENST00000554677 CRTC3Q6UUV7 619 aa12.03□□□□□ -0.48
MTHFD1-207ENST00000554677 ABRAXAS1Q6UWZ7 409 aa12.03□□□□□ -0.48
MTHFD1-207ENST00000554677 PHYKPLQ8IUZ5 450 aa12.03□□□□□ -0.48
MTHFD1-207ENST00000554677 OR8K1Q8NGG5 319 aa12.03□□□□□ -0.48
MTHFD1-207ENST00000554677 RNF31Q96EP0 1072 aa12.03□□□□□ -0.48
MTHFD1-207ENST00000554677 OSGEPL1Q9H4B0 414 aa12.03□□□□□ -0.48
MTHFD1-207ENST00000554677 STN1Q9H668 368 aaKnown RBP12.03□□□□□ -0.48
MTHFD1-207ENST00000554677 GLOD4Q9HC38 313 aa12.03□□□□□ -0.48
MTHFD1-207ENST00000554677 LCMT1Q9UIC8 334 aa12.03□□□□□ -0.48
MTHFD1-207ENST00000554677 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.03□□□□□ -0.48
MTHFD1-207ENST00000554677 MRPS18BQ9Y676 258 aaKnown RBP12.03□□□□□ -0.48
MTHFD1-207ENST00000554677 TNRC6AQ8NDV7 1962 aaKnown RBP12.03□□□□□ -0.48
MTHFD1-207ENST00000554677 CCDC88CQ9P219 2028 aa12.03□□□□□ -0.48
MTHFD1-207ENST00000554677 APOL1O14791 398 aa12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 KIF1CO43896 1103 aaKnown RBP12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 VEGFDO43915 354 aa12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 UBXN7O94888 489 aa12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 NDST3O95803 873 aa12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 PTPN3P26045 913 aa12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 RPL10P27635 214 aaKnown RBP12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 STAT5AP42229 794 aa12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 ARHGAP25P42331 645 aa12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 MAP7Q14244 749 aa12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 PCSK7Q16549 785 aa12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 TAZQ16635 292 aa12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 ATP13A5Q4VNC0 1218 aa12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 CRTC2Q53ET0 693 aaPredicted RBP12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 COLEC12Q5KU26 742 aa12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 ZFYVE27Q5T4F4 411 aa12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 LRRC38Q5VT99 294 aa12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 MFSD7Q6UXD7 560 aa12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 WASH2PQ6VEQ5 465 aa12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 LRRTM4Q86VH4 590 aa12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 AVL9Q8NBF6 648 aa12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 TEKT5Q96M29 485 aa12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 ZNF830Q96NB3 372 aaPredicted RBP12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 TIMM29Q9BSF4 260 aa12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 EFHD1Q9BUP0 239 aa12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 GPR63Q9BZJ6 419 aa12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 EPN3Q9H201 632 aa12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 TRIT1Q9H3H1 467 aaKnown RBP12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 ZNF768Q9H5H4 540 aaKnown RBP12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 BPIFA1Q9NP55 256 aa12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 SLC40A1Q9NP59 571 aa12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 WASH6PQ9NQA3 447 aa12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 RAD18Q9NS91 495 aa12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 UBP1Q9NZI7 540 aa12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 SAE1Q9UBE0 346 aaPredicted RBP12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 DNAJC16Q9Y2G8 782 aa12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 WDR37Q9Y2I8 494 aa12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 RPS6KL1Q9Y6S9 549 aa12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 USP9XQ93008 2570 aaPredicted RBP12.02□□□□□ -0.49
MTHFD1-207ENST00000554677 ICE1Q9Y2F5 2266 aa12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 LOC285095A0A1B0GVY8 99 aa12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 OR52A4PA6NMU1 304 aa12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 GOLGA6L19H0YKK7 550 aa12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 TOX3O15405 576 aaPredicted RBP12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 ABCB7O75027 752 aa12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 PMPCBO75439 489 aa12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 CDK14O94921 469 aa12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 VIPP01282 170 aa12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 FURINP09958 794 aa12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 AMD1P17707 334 aa12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 SEPHS1P49903 392 aa12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 DRG2P55039 364 aaKnown RBP12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 ADCY2Q08462 1091 aa12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 WASHC5Q12768 1159 aa12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 TMEM115Q12893 351 aaPredicted RBP12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 PRKD1Q15139 912 aaPredicted RBP12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 NOMO1Q15155 1222 aa12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 SEPT7Q16181 437 aaKnown RBP12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 INSCQ1MX18 579 aa12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 DEFB109BQ30KR1 87 aa12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 AGAP9Q5VTM2 703 aa12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 KDELC1Q6UW63 502 aa12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 RFX6Q8HWS3 928 aa12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 TTC30BQ8N4P2 665 aa12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 KLHL6Q8WZ60 621 aa12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 STARD8Q92502 1023 aa12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 RSC1A1Q92681 617 aa12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 KIAA1143Q96AT1 154 aaPredicted RBP12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 ABHD17AQ96GS6 310 aa12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 TGM7Q96PF1 710 aa12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 VPS35Q96QK1 796 aa12.01□□□□□ -0.49
MTHFD1-207ENST00000554677 MAK16Q9BXY0 300 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms