RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 PAGE1O75459 146 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 JRKO75564 520 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 PGM3O95394 542 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 PARNO95453 639 aaKnown RBP3.41□□□□□ -1.86
SEC23A-207ENST00000554615 FAM157BP0CG42 384 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 ERVK-10P10266 1014 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 POLR2IP36954 125 aaKnown RBP3.41□□□□□ -1.86
SEC23A-207ENST00000554615 VPS41P49754 854 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 ALDH3A2P51648 485 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 CLNS1AP54105 237 aaKnown RBP3.41□□□□□ -1.86
SEC23A-207ENST00000554615 SLC7A9P82251 487 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 SLC25A3Q00325 362 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 EPS8Q12929 822 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 LCP2Q13094 533 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 BMPR2Q13873 1038 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 KRT81Q14533 505 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 MOGQ16653 247 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 WDR45BQ5MNZ6 344 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 CPZQ66K79 652 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 OR6B2Q6IFH4 312 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 ANKRD26P1Q6NSI1 321 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 ANKRD33Q7Z3H0 272 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 METTL3Q86U44 580 aaKnown RBP3.41□□□□□ -1.86
SEC23A-207ENST00000554615 CMTR2Q8IYT2 770 aaKnown RBP3.41□□□□□ -1.86
SEC23A-207ENST00000554615 TBC1D21Q8IYX1 336 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 EID3Q8N140 333 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 MYO1HQ8N1T3 1032 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 FAM81AQ8TBF8 368 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 APH1BQ8WW43 257 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 LRRC58Q96CX6 371 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 SLC29A1Q99808 456 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 PITHD1Q9GZP4 211 aaPredicted RBP3.41□□□□□ -1.86
SEC23A-207ENST00000554615 KCNK9Q9NPC2 374 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 NECTIN3Q9NQS3 549 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 TMPRSS4Q9NRS4 437 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 GPATCH2LQ9NWQ4 482 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 NCKIPSDQ9NZQ3 722 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 OR12D3Q9UGF7 316 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 TBK1Q9UHD2 729 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 ATP6V1HQ9UI12 483 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 ACOT9Q9Y305 439 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 PCDHB1Q9Y5F3 818 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 PCDHGA3Q9Y5H0 932 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 AP4B1Q9Y6B7 739 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 MANSC4A6NHS7 340 aaPredicted RBP3.41□□□□□ -1.86
SEC23A-207ENST00000554615 H3BMQ9 156 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 DYNC1LI2O43237 492 aaPredicted RBP3.41□□□□□ -1.86
SEC23A-207ENST00000554615 TREHO43280 583 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 NRP2O60462 931 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 CD1AP06126 327 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 PGK2P07205 417 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 ZNF12P17014 697 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 IRS1P35568 1242 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 CAPGP40121 348 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 ARL4AP40617 200 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 SERPINH1P50454 418 aaKnown RBP3.41□□□□□ -1.86
SEC23A-207ENST00000554615 POLE2P56282 527 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 STX1BP61266 288 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 PWP1Q13610 501 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 PRKG1Q13976 671 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 VEZF1Q14119 521 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 NKG7Q16617 165 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 BCL7AQ4VC05 210 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 ZNF789Q5FWF6 425 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 PPM1LQ5SGD2 360 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 BSPRYQ5W0U4 402 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 LAIR1Q6GTX8 287 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 PAOXQ6QHF9 649 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 ZNF765Q7L2R6 523 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 TLK2Q86UE8 772 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.41□□□□□ -1.86
SEC23A-207ENST00000554615 PARP8Q8N3A8 854 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 PPHLN1Q8NEY8 458 aaKnown RBP3.41□□□□□ -1.86
SEC23A-207ENST00000554615 OR6J1Q8NGC5 347 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 DYNC2LI1Q8TCX1 351 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 PPP4R1Q8TF05 950 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 GTF2H4Q92759 462 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 EFHD2Q96C19 240 aaPredicted RBP3.41□□□□□ -1.86
SEC23A-207ENST00000554615 NXNL1Q96CM4 212 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 C19orf60Q96EN9 201 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 RNF145Q96MT1 663 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 COG8Q96MW5 612 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 ZNF649Q9BS31 505 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 ZYG11BQ9C0D3 744 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 SNX25Q9H3E2 840 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 FBXO44Q9H4M3 255 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 ZCCHC4Q9H5U6 513 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 KAT8Q9H7Z6 458 aaKnown RBP3.41□□□□□ -1.86
SEC23A-207ENST00000554615 ZNF358Q9NW07 568 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 SLC25A37Q9NYZ2 338 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 GPRC5BQ9NZH0 403 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 IL17CQ9P0M4 197 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 ARMCX1Q9P291 453 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 BTNL2Q9UIR0 455 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 FBXO5Q9UKT4 447 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 TMPRSS11EQ9UL52 423 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 TLDC2A0PJX2 215 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 PABPN1LA6NDY0 278 aaKnown RBP3.41□□□□□ -1.86
SEC23A-207ENST00000554615 TK2O00142 265 aa3.41□□□□□ -1.86
SEC23A-207ENST00000554615 PIK3R2O00459 728 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms