RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.98□□□□□ -1.61
ATXN3-228ENST00000554592 CCDC73Q6ZRK6 1079 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 ZC3H3Q8IXZ2 948 aaKnown RBP4.98□□□□□ -1.61
ATXN3-228ENST00000554592 KRT78Q8N1N4 520 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 MAPK15Q8TD08 544 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 TAF4BQ92750 862 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 JAKMIP2Q96AA8 810 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 SGF29Q96ES7 293 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 APIPQ96GX9 242 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 PRR11Q96HE9 360 aaPredicted RBP4.98□□□□□ -1.61
ATXN3-228ENST00000554592 APOLD1Q96LR9 279 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 NDC1Q9BTX1 674 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.98□□□□□ -1.61
ATXN3-228ENST00000554592 LRRC27Q9C0I9 530 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 NUP62CLQ9H1M0 184 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 AGPAT3Q9NRZ7 376 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 FAM49BQ9NUQ9 324 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 SATB2Q9UPW6 733 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 HBS1LQ9Y450 684 aaKnown RBP4.98□□□□□ -1.61
ATXN3-228ENST00000554592 HS3ST3A1Q9Y663 406 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 CFAP46Q8IYW2 2715 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 MYO16Q9Y6X6 1858 aa4.98□□□□□ -1.61
ATXN3-228ENST00000554592 TSC2P49815 1807 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 DENND4CQ5VZ89 1909 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 TENM4Q6N022 2769 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 ZNF638Q14966 1978 aaKnown RBP4.97□□□□□ -1.61
ATXN3-228ENST00000554592 EDDM13A0A1B0GTR0 161 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 ENO4A6NNW6 628 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 B5MCH6 92 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 MYO1FO00160 1098 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 SCAMP1O15126 338 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 CLIC2O15247 247 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 EIF3DO15371 548 aaKnown RBP eCLIP4.97□□□□□ -1.61
ATXN3-228ENST00000554592 FFAR2O15552 330 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 SLC7A4O43246 635 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 TNFSF15O95150 251 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 KIF20AO95235 890 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 MATN4O95460 622 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 SRPRAP08240 638 aaKnown RBP4.97□□□□□ -1.61
ATXN3-228ENST00000554592 THEGLP0DJG4 465 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 GIMD1P0DJR0 217 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 SERPINB3P29508 390 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 CD70P32970 193 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 PIK3CBP42338 1070 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 CYP2J2P51589 502 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 ADPRHP54922 357 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 CLRN1P58418 232 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 YWHAGP61981 247 aaKnown RBP eCLIP4.97□□□□□ -1.61
ATXN3-228ENST00000554592 KLF10Q13118 480 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 LSM12Q3MHD2 195 aaKnown RBP4.97□□□□□ -1.61
ATXN3-228ENST00000554592 SETMARQ53H47 684 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-228ENST00000554592 C3orf38Q5JPI3 329 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 PM20D1Q6GTS8 502 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 SCARA5Q6ZMJ2 495 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 CCDC117Q8IWD4 279 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-228ENST00000554592 ELOA2Q8IYF1 753 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-228ENST00000554592 AADATQ8N5Z0 425 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 WDR36Q8NI36 951 aaKnown RBP4.97□□□□□ -1.61
ATXN3-228ENST00000554592 FIBINQ8TAL6 211 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 BRIX1Q8TDN6 353 aaKnown RBP4.97□□□□□ -1.61
ATXN3-228ENST00000554592 AZIN2Q96A70 460 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 ATXN7L3BQ96GX2 97 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 LMLNQ96KR4 655 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 PLEKHG4BQ96PX9 1271 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 TBCBQ99426 244 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 ELAC2Q9BQ52 826 aaKnown RBP4.97□□□□□ -1.61
ATXN3-228ENST00000554592 PANK2Q9BZ23 570 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 CYP3A43Q9HB55 503 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 SARS2Q9NP81 518 aaKnown RBP4.97□□□□□ -1.61
ATXN3-228ENST00000554592 OLA1Q9NTK5 396 aaKnown RBP4.97□□□□□ -1.61
ATXN3-228ENST00000554592 SIDT1Q9NXL6 827 aaKnown RBP4.97□□□□□ -1.61
ATXN3-228ENST00000554592 NLGN3Q9NZ94 848 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 NCKIPSDQ9NZQ3 722 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 CGNQ9P2M7 1197 aaKnown RBP4.97□□□□□ -1.61
ATXN3-228ENST00000554592 CYTH4Q9UIA0 394 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 ERVW-1Q9UQF0 538 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 ENTPD2Q9Y5L3 495 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 SRPRBQ9Y5M8 271 aaKnown RBP4.97□□□□□ -1.61
ATXN3-228ENST00000554592 COMMD10Q9Y6G5 202 aa4.97□□□□□ -1.61
ATXN3-228ENST00000554592 ANAPC1Q9H1A4 1944 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 COL5A1P20908 1838 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-228ENST00000554592 A0A1W2PNU3 283 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-228ENST00000554592 CPED1A4D0V7 1026 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 CLEC18AA5D8T8 446 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 TTC34A8MYJ7 566 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 IRAK2O43187 625 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 TPD52L2O43399 206 aaKnown RBP4.96□□□□□ -1.62
ATXN3-228ENST00000554592 PLRG1O43660 514 aaKnown RBP4.96□□□□□ -1.62
ATXN3-228ENST00000554592 EXOC3O60645 756 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 TBL1XO60907 577 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 PPFIA2O75334 1257 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 SLC43A1O75387 559 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 TCEA3O75764 348 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 PIAS2O75928 621 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 MOCS3O95396 460 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 VNN1O95497 513 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 ASS1P00966 412 aaKnown RBP4.96□□□□□ -1.62
ATXN3-228ENST00000554592 IL1BP01584 269 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 ITGA2BP08514 1039 aa4.96□□□□□ -1.62
ATXN3-228ENST00000554592 MTHFD1P11586 935 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms