RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 GALNT5Q7Z7M9 940 aa4.92□□□□□ -1.62
SCFD1-211ENST00000554437 ZSCAN30Q86W11 494 aa4.92□□□□□ -1.62
SCFD1-211ENST00000554437 TMPRSS12Q86WS5 348 aa4.92□□□□□ -1.62
SCFD1-211ENST00000554437 ADGRF2Q8IZF7 708 aa4.92□□□□□ -1.62
SCFD1-211ENST00000554437 RFLNBQ8N5W9 214 aa4.92□□□□□ -1.62
SCFD1-211ENST00000554437 NKAIN3Q8N8D7 197 aa4.92□□□□□ -1.62
SCFD1-211ENST00000554437 UTP15Q8TED0 518 aaKnown RBP4.92□□□□□ -1.62
SCFD1-211ENST00000554437 SLC44A1Q8WWI5 657 aa4.92□□□□□ -1.62
SCFD1-211ENST00000554437 MOAP1Q96BY2 351 aa4.92□□□□□ -1.62
SCFD1-211ENST00000554437 PGAM5Q96HS1 289 aa4.92□□□□□ -1.62
SCFD1-211ENST00000554437 FEM1CQ96JP0 617 aa4.92□□□□□ -1.62
SCFD1-211ENST00000554437 GAD1Q99259 594 aa4.92□□□□□ -1.62
SCFD1-211ENST00000554437 SDF4Q9BRK5 362 aa4.92□□□□□ -1.62
SCFD1-211ENST00000554437 SYT17Q9BSW7 474 aa4.92□□□□□ -1.62
SCFD1-211ENST00000554437 TMEM39BQ9GZU3 492 aa4.92□□□□□ -1.62
SCFD1-211ENST00000554437 DONSONQ9NYP3 566 aa4.92□□□□□ -1.62
SCFD1-211ENST00000554437 FBXL17Q9UF56 701 aa4.92□□□□□ -1.62
SCFD1-211ENST00000554437 ARHGEF40Q8TER5 1519 aa4.92□□□□□ -1.62
SCFD1-211ENST00000554437 IFITM10A6NMD0 228 aa4.91□□□□□ -1.62
SCFD1-211ENST00000554437 MAP2K7O14733 419 aa4.91□□□□□ -1.62
SCFD1-211ENST00000554437 PLOD3O60568 738 aa4.91□□□□□ -1.62
SCFD1-211ENST00000554437 TPPPO94811 219 aa4.91□□□□□ -1.62
SCFD1-211ENST00000554437 PTMAP06454 111 aaKnown RBP4.91□□□□□ -1.62
SCFD1-211ENST00000554437 AMD1P17707 334 aa4.91□□□□□ -1.62
SCFD1-211ENST00000554437 POLR2CP19387 275 aaPredicted RBP4.91□□□□□ -1.62
SCFD1-211ENST00000554437 KCNA5P22460 613 aa4.91□□□□□ -1.62
SCFD1-211ENST00000554437 ACADLP28330 430 aa4.91□□□□□ -1.62
SCFD1-211ENST00000554437 GARSP41250 739 aaKnown RBP4.91□□□□□ -1.62
SCFD1-211ENST00000554437 MSH2P43246 934 aa4.91□□□□□ -1.62
SCFD1-211ENST00000554437 EEF1A1P68104 462 aaKnown RBP4.91□□□□□ -1.62
SCFD1-211ENST00000554437 COG7P83436 770 aa4.91□□□□□ -1.62
SCFD1-211ENST00000554437 TROAPQ12815 778 aa4.91□□□□□ -1.62
SCFD1-211ENST00000554437 KRTCAP3Q53RY4 240 aa4.91□□□□□ -1.62
SCFD1-211ENST00000554437 EEF1A1P5Q5VTE0 462 aa4.91□□□□□ -1.62
SCFD1-211ENST00000554437 TMEM198Q66K66 360 aa4.91□□□□□ -1.62
SCFD1-211ENST00000554437 LCN10Q6JVE6 187 aa4.91□□□□□ -1.62
SCFD1-211ENST00000554437 CFAP77Q6ZQR2 320 aa4.91□□□□□ -1.62
SCFD1-211ENST00000554437 ASB18Q6ZVZ8 466 aa4.91□□□□□ -1.62
SCFD1-211ENST00000554437 SLC9B2Q86UD5 537 aa4.91□□□□□ -1.62
SCFD1-211ENST00000554437 RASGEF1CQ8N431 466 aa4.91□□□□□ -1.62
SCFD1-211ENST00000554437 EMC1Q8N766 993 aa4.91□□□□□ -1.62
SCFD1-211ENST00000554437 LSMEM1Q8N8F7 131 aa4.91□□□□□ -1.62
SCFD1-211ENST00000554437 IL17RCQ8NAC3 791 aa4.91□□□□□ -1.62
SCFD1-211ENST00000554437 RSRC1Q96IZ7 334 aaKnown RBP4.91□□□□□ -1.62
SCFD1-211ENST00000554437 PKNOX2Q96KN3 472 aa4.91□□□□□ -1.62
SCFD1-211ENST00000554437 ANKEF1Q9NU02 776 aa4.91□□□□□ -1.62
SCFD1-211ENST00000554437 HAUS2Q9NVX0 235 aa4.91□□□□□ -1.62
SCFD1-211ENST00000554437 NKIRAS2Q9NYR9 191 aa4.91□□□□□ -1.62
SCFD1-211ENST00000554437 ZNF215Q9UL58 517 aaPredicted RBP4.91□□□□□ -1.62
SCFD1-211ENST00000554437 ICAM5Q9UMF0 924 aa4.91□□□□□ -1.62
SCFD1-211ENST00000554437 NENFQ9UMX5 172 aa4.91□□□□□ -1.62
SCFD1-211ENST00000554437 ZNF711Q9Y462 761 aa4.91□□□□□ -1.62
SCFD1-211ENST00000554437 CMAHPQ9Y471 501 aa4.91□□□□□ -1.62
SCFD1-211ENST00000554437 ASPDHA6ND91 283 aa4.9□□□□□ -1.63
SCFD1-211ENST00000554437 SMAD9O15198 467 aaKnown RBP4.9□□□□□ -1.63
SCFD1-211ENST00000554437 ZNHIT1O43257 154 aa4.9□□□□□ -1.63
SCFD1-211ENST00000554437 PLPP2O43688 288 aa4.9□□□□□ -1.63
SCFD1-211ENST00000554437 WDR1O75083 606 aa4.9□□□□□ -1.63
SCFD1-211ENST00000554437 KRT36O76013 467 aa4.9□□□□□ -1.63
SCFD1-211ENST00000554437 HOXA13P31271 388 aaPredicted RBP4.9□□□□□ -1.63
SCFD1-211ENST00000554437 GPR143P51810 404 aa4.9□□□□□ -1.63
SCFD1-211ENST00000554437 ILF3Q12906 894 aaKnown RBP eCLIP4.9□□□□□ -1.63
SCFD1-211ENST00000554437 FAM76BQ5HYJ3 339 aa4.9□□□□□ -1.63
SCFD1-211ENST00000554437 RAD9BQ6WBX8 426 aa4.9□□□□□ -1.63
SCFD1-211ENST00000554437 C9orf139Q6ZV77 190 aa4.9□□□□□ -1.63
SCFD1-211ENST00000554437 MUC20Q8N307 709 aaPredicted RBP4.9□□□□□ -1.63
SCFD1-211ENST00000554437 CHCHD4Q8N4Q1 142 aa4.9□□□□□ -1.63
SCFD1-211ENST00000554437 GSDMBQ8TAX9 411 aa4.9□□□□□ -1.63
SCFD1-211ENST00000554437 TRPC4APQ8TEL6 797 aa4.9□□□□□ -1.63
SCFD1-211ENST00000554437 NEURL2Q9BR09 285 aa4.9□□□□□ -1.63
SCFD1-211ENST00000554437 SRSF8Q9BRL6 282 aaKnown RBP4.9□□□□□ -1.63
SCFD1-211ENST00000554437 LRMDAQ9H2I8 198 aa4.9□□□□□ -1.63
SCFD1-211ENST00000554437 GHITMQ9H3K2 345 aa4.9□□□□□ -1.63
SCFD1-211ENST00000554437 KLHL1Q9NR64 748 aa4.9□□□□□ -1.63
SCFD1-211ENST00000554437 CWC25Q9NXE8 425 aaPredicted RBP4.9□□□□□ -1.63
SCFD1-211ENST00000554437 KCNG2Q9UJ96 466 aa4.9□□□□□ -1.63
SCFD1-211ENST00000554437 DBNLQ9UJU6 430 aaKnown RBP4.9□□□□□ -1.63
SCFD1-211ENST00000554437 CNTNAP2Q9UHC6 1331 aa4.9□□□□□ -1.63
SCFD1-211ENST00000554437 C16orf97H3BN30 126 aa4.89□□□□□ -1.63
SCFD1-211ENST00000554437 FAM106CPP0CH98 169 aa4.89□□□□□ -1.63
SCFD1-211ENST00000554437 PON1P27169 355 aa4.89□□□□□ -1.63
SCFD1-211ENST00000554437 PSMB10P40306 273 aa4.89□□□□□ -1.63
SCFD1-211ENST00000554437 DLX5P56178 289 aa4.89□□□□□ -1.63
SCFD1-211ENST00000554437 PLIN5Q00G26 463 aa4.89□□□□□ -1.63
SCFD1-211ENST00000554437 MC1RQ01726 317 aa4.89□□□□□ -1.63
SCFD1-211ENST00000554437 AIMP2Q13155 320 aaKnown RBP4.89□□□□□ -1.63
SCFD1-211ENST00000554437 FAM205BPQ63HN1 556 aa4.89□□□□□ -1.63
SCFD1-211ENST00000554437 OR7E24Q6IFN5 339 aa4.89□□□□□ -1.63
SCFD1-211ENST00000554437 TMCO3Q6UWJ1 677 aa4.89□□□□□ -1.63
SCFD1-211ENST00000554437 ZNF704Q6ZNC4 412 aaPredicted RBP4.89□□□□□ -1.63
SCFD1-211ENST00000554437 FOXL2NBQ6ZUU3 175 aa4.89□□□□□ -1.63
SCFD1-211ENST00000554437 OR13A1Q8NGR1 328 aa4.89□□□□□ -1.63
SCFD1-211ENST00000554437 C1QTNF1Q9BXJ1 281 aa4.89□□□□□ -1.63
SCFD1-211ENST00000554437 MAK16Q9BXY0 300 aaKnown RBP4.89□□□□□ -1.63
SCFD1-211ENST00000554437 ABCF3Q9NUQ8 709 aa4.89□□□□□ -1.63
SCFD1-211ENST00000554437 MAGED1Q9Y5V3 778 aaPredicted RBP4.89□□□□□ -1.63
SCFD1-211ENST00000554437 KAT6BQ8WYB5 2073 aa4.88□□□□□ -1.63
SCFD1-211ENST00000554437 A0A1W2PS18 150 aa4.88□□□□□ -1.63
SCFD1-211ENST00000554437 SYNDIG1LA6NDD5 238 aa4.88□□□□□ -1.63
SCFD1-211ENST00000554437 PRR23D1E9PI22 279 aaPredicted RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms